Experiment ID: 777

Field Description
namea longitudinal study of the development of the saliva microbiome in infants 2 days to 5 years compared to the microbiome in adolescents
doihttps://doi.org/10.1038/s41598-020-66658-7
sraprjeb35824
mapmd543dc90b313475f538b3bbe72d88efbaf
datamd556eeaecd94fc1073cea87f35dec33674

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
municipality of umea0.500000
LOWER IN 2-days-old human0.500000
5-year-old human stage0.500000
LOWER IN 3-year-old human stage0.500000
2-days-old human0.500000
LOWER IN 5-year-old human stage0.500000
3-year-old human stage0.333333
LOWER IN 18-month-old human stage0.333333
18-month-old human stage0.250000
LOWER IN 3-month-old human stage0.166667
3-month-old human stage0.142857
LOWER IN infant0.076923
sweden0.071429
LOWER IN child0.071429
infant0.029412
child0.021739
saliva0.018519
homo sapiens0.003096
Fraction of annotations for the query sequences containing the term
TermScore
municipality of umea1.000000
sweden1.000000
saliva1.000000
homo sapiens1.000000
child0.631579
infant0.368421
18-month-old human stage0.263158
3-month-old human stage0.210526
3-year-old human stage0.210526
5-year-old human stage0.157895
2-days-old human0.157895
LOWER IN 3-month-old human stage0.105263
LOWER IN 18-month-old human stage0.105263
LOWER IN 3-year-old human stage0.105263
LOWER IN infant0.052632
LOWER IN 2-days-old human0.052632
LOWER IN 5-year-old human stage0.052632
LOWER IN child0.052632
Number of experiments associating the term to the sequence
TermScore
LOWER IN 3-month-old human stage1.000000
18-month-old human stage1.000000
LOWER IN infant1.000000
child1.000000
municipality of umea1.000000
sweden1.000000
saliva1.000000
homo sapiens1.000000
3-month-old human stage1.000000
LOWER IN 2-days-old human1.000000
infant1.000000
3-year-old human stage1.000000
LOWER IN 18-month-old human stage1.000000
5-year-old human stage1.000000
LOWER IN 3-year-old human stage1.000000
2-days-old human1.000000
LOWER IN 5-year-old human stage1.000000
LOWER IN child1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
777amnondominant 2-days-old human, infant, municipality of umea, sweden, saliva, homo sapiens2021-04-26v31 / 8approvedNo
777amnondominant 3-month-old human stage, infant, municipality of umea, sweden, saliva, homo sapiens2021-04-26v31 / 12approvedNo
777amnoncommon 2-days-old human, infant, municipality of umea, sweden, saliva, homo sapiens2021-04-26v31 / 15approvedNo
777amnondominant 18-month-old human stage, homo sapiens, saliva, sweden, municipality of umea, child2021-04-26v31 / 17approvedNo
777amnondominant 3-year-old human stage, homo sapiens, saliva, sweden, municipality of umea, child2021-04-26v31 / 17approvedNo
777amnondominant 18-month-old human stage, child, municipality of umea, sweden, saliva, homo sapiens2021-04-26v31 / 18approvedNo
777amnondominant 5-year-old human stage, child, municipality of umea, sweden, saliva, homo sapiens2021-04-26v31 / 18approvedNo
777amnoncommon 3-month-old human stage, infant, municipality of umea, sweden, saliva, homo sapiens2021-04-26v31 / 18approvedNo
777amnon high in 3-month-old human stage infant compared to 18-month-old human stage child in municipality of umea sweden saliva homo sapiens 2021-04-26v31 / 79approvedNo
777amnoncommon 18-month-old human stage, homo sapiens, saliva, sweden, municipality of umea, child2021-04-26v31 / 79approvedNo
777amnon high in 3-year-old human stage compared to 5-year-old human stage in child municipality of umea sweden saliva homo sapiens 2021-04-26v31 / 81approvedNo
777amnon high in 18-month-old human stage compared to 3-year-old human stage in child municipality of umea sweden saliva homo sapiens 2021-04-26v31 / 83approvedNo
777amnoncommon 5-year-old human stage, homo sapiens, saliva, sweden, municipality of umea, child2021-04-26v31 / 83approvedNo
777amnoncommon 3-year-old human stage, homo sapiens, saliva, sweden, municipality of umea, child2021-04-26v31 / 92approvedNo
777amnon high in 2-days-old human compared to 3-month-old human stage in infant municipality of umea sweden saliva homo sapiens 2021-04-26v31 / 104approvedNo
777amnon high in 5-year-old human stage compared to 3-year-old human stage in child municipality of umea sweden saliva homo sapiens 2021-04-26v31 / 120approvedNo
777amnon high in 3-year-old human stage compared to 18-month-old human stage in child municipality of umea sweden saliva homo sapiens 2021-04-26v31 / 184approvedNo
777amnon high in 3-month-old human stage compared to 2-days-old human in infant homo sapiens saliva sweden municipality of umea 2021-04-26v31 / 197approvedNo
777amnon high in 18-month-old human stage child compared to 3-month-old human stage infant in municipality of umea sweden saliva homo sapiens 2021-04-26v31 / 583approvedNo

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