dbBact

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Experiment ID: 780

Field	Description
name	probiotic properties of lactobacillus paracasei subsp. paracasei l1 and its growth performance-promotion in chicken by improving the intestinal microflora
doi	https://doi.org/10.3389/fphys.2019.00937
sra	prjna524459
mapmd5	351a03769922adcf4b4eca70cbccfc52
datamd5	73b749de8949c9044c28281069600ecd

Annotations for experiment:

term enrichment score

Term	Score
jinzhou city prefecture	0.666667
small intestine	0.250000
jejunum	0.222222
LOWER IN small intestine	0.166667
LOWER IN jejunum	0.153846
duodenum	0.133333
chicken	0.105263
LOWER IN duodenum	0.105263
gallus gallus	0.100000
caecum	0.045455
LOWER IN caecum	0.041667
research facility	0.012270
china	0.010753

Fraction of dbbact annotations with this term covered by the query

Term	Score
jinzhou city prefecture	0.500000
small intestine	0.166667
LOWER IN small intestine	0.166667
jejunum	0.142857
LOWER IN jejunum	0.142857
duodenum	0.076923
LOWER IN duodenum	0.076923
chicken	0.055556
gallus gallus	0.052632
caecum	0.023810
LOWER IN caecum	0.023810
research facility	0.006173
china	0.005405

Fraction of annotations for the query sequences containing the term

Term	Score
jinzhou city prefecture	1.000000
china	1.000000
research facility	1.000000
chicken	1.000000
gallus gallus	1.000000
caecum	0.500000
jejunum	0.500000
duodenum	0.500000
small intestine	0.500000
LOWER IN jejunum	0.166667
LOWER IN duodenum	0.166667
LOWER IN small intestine	0.166667
LOWER IN caecum	0.166667

Number of experiments associating the term to the sequence

Term	Score
caecum	1.000000
jinzhou city prefecture	1.000000
china	1.000000
research facility	1.000000
chicken	1.000000
gallus gallus	1.000000
jejunum	1.000000
duodenum	1.000000
small intestine	1.000000
LOWER IN jejunum	1.000000
LOWER IN duodenum	1.000000
LOWER IN small intestine	1.000000
LOWER IN caecum	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
780	amnon	dominant jinzhou city prefecture, china, research facility, chicken, gallus gallus, jejunum, duodenum, small intestine	2021-04-28	v3	1 / 10	approved	No
780	amnon	dominant caecum, jinzhou city prefecture, china, research facility, chicken, gallus gallus	2021-04-28	v3	1 / 18	approved	No
780	amnon	high in jejunum duodenum small intestine compared to caecum in jinzhou city prefecture china research facility chicken gallus gallus	2021-04-28	v3	1 / 153	approved	No
780	amnon	high in caecum compared to jejunum duodenum small intestine in jinzhou city prefecture china research facility chicken gallus gallus	2021-04-28	v3	1 / 212	approved	No
780	amnon	common jinzhou city prefecture, china, research facility, chicken, gallus gallus, jejunum, duodenum, small intestine	2021-04-28	v3	1 / 232	approved	No
780	amnon	common caecum, jinzhou city prefecture, china, research facility, chicken, gallus gallus	2021-04-28	v3	1 / 294	approved	No

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