Experiment ID: 782

Field Description
nameeffects of aging on the skin and gill microbiota of farmed seabass and seabream
sraprjna687505
doihttps://doi.org/10.1186/s42523-020-00072-2
datamd56280dfc7295618755f15a5ad1673c3dc
mapmd55d71a9dc0c8712e84500f07cf27105b5

Annotations for experiment:

term enrichment score
TermScore
ria formosa0.666667
open water pond0.666667
dicentrarchus labrax0.500000
seabass0.500000
portuguese republic0.500000
sparus aurata0.500000
seabream0.500000
gill0.285714
fish farm0.285714
LOWER IN age 3 years0.250000
age 3 years0.222222
LOWER IN juvenile organism0.222222
LOWER IN adult organism0.166667
juvenile organism0.153846
LOWER IN sparus aurata0.142857
LOWER IN seabream0.142857
LOWER IN dicentrarchus labrax0.142857
LOWER IN seabass0.142857
LOWER IN age 1-2 years0.142857
age 1-2 years0.133333
LOWER IN gill0.125000
LOWER IN age 1 year0.125000
age 1 year0.117647
LOWER IN skin0.095238
adult organism0.083333
skin0.048780
Fraction of dbbact annotations with this term covered by the query
TermScore
dicentrarchus labrax0.500000
seabass0.500000
LOWER IN sparus aurata0.500000
LOWER IN seabream0.500000
ria formosa0.500000
open water pond0.500000
sparus aurata0.500000
seabream0.500000
LOWER IN dicentrarchus labrax0.500000
LOWER IN seabass0.500000
LOWER IN age 3 years0.500000
LOWER IN age 1-2 years0.500000
portuguese republic0.333333
age 3 years0.333333
LOWER IN juvenile organism0.333333
age 1-2 years0.333333
LOWER IN gill0.250000
LOWER IN age 1 year0.250000
gill0.200000
age 1 year0.200000
fish farm0.166667
LOWER IN adult organism0.166667
juvenile organism0.142857
LOWER IN skin0.111111
adult organism0.055556
skin0.025641
Fraction of annotations for the query sequences containing the term
TermScore
fish farm1.000000
portuguese republic1.000000
ria formosa1.000000
open water pond1.000000
dicentrarchus labrax0.500000
seabass0.500000
gill0.500000
skin0.500000
sparus aurata0.500000
seabream0.500000
adult organism0.166667
age 3 years0.166667
LOWER IN juvenile organism0.166667
juvenile organism0.166667
LOWER IN adult organism0.166667
LOWER IN age 3 years0.166667
LOWER IN sparus aurata0.083333
LOWER IN seabream0.083333
LOWER IN gill0.083333
LOWER IN age 1 year0.083333
LOWER IN dicentrarchus labrax0.083333
LOWER IN seabass0.083333
LOWER IN skin0.083333
age 1 year0.083333
LOWER IN age 1-2 years0.083333
age 1-2 years0.083333
Number of experiments associating the term to the sequence
TermScore
dicentrarchus labrax1.000000
seabass1.000000
LOWER IN sparus aurata1.000000
LOWER IN seabream1.000000
fish farm1.000000
gill1.000000
portuguese republic1.000000
ria formosa1.000000
open water pond1.000000
skin1.000000
LOWER IN gill1.000000
sparus aurata1.000000
seabream1.000000
adult organism1.000000
age 3 years1.000000
LOWER IN juvenile organism1.000000
LOWER IN age 1 year1.000000
LOWER IN dicentrarchus labrax1.000000
LOWER IN seabass1.000000
LOWER IN skin1.000000
juvenile organism1.000000
age 1 year1.000000
LOWER IN adult organism1.000000
LOWER IN age 3 years1.000000
LOWER IN age 1-2 years1.000000
age 1-2 years1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
782amnondominant fish farm, gill, portuguese republic, sparus aurata, ria formosa, open water pond, seabream2021-05-07v41 / 12approvedNo
782amnondominant fish farm, skin, portuguese republic, sparus aurata, ria formosa, open water pond, seabream2021-05-07v41 / 13approvedNo
782amnondominant fish farm, skin, portuguese republic, dicentrarchus labrax, ria formosa, open water pond, seabass2021-05-07v41 / 21approvedNo
782amnondominant fish farm, gill, portuguese republic, dicentrarchus labrax, ria formosa, open water pond, seabass2021-05-07v41 / 21approvedNo
782amnon high in adult organism age 3 years compared to juvenile organism age 1-2 years in fish farm skin portuguese republic sparus aurata ria formosa open water pond seabream 2021-05-06v41 / 27approvedNo
782amnoncommon fish farm, gill, portuguese republic, sparus aurata, ria formosa, open water pond, seabream2021-05-07v41 / 40approvedNo
782amnon high in juvenile organism age 1-2 years compared to adult organism age 3 years in fish farm skin portuguese republic sparus aurata ria formosa open water pond seabream 2021-05-06v41 / 41approvedNo
782amnon high in juvenile organism age 1-2 years compared to adult organism age 3 years in fish farm gill portuguese republic sparus aurata ria formosa open water pond seabream 2021-05-06v41 / 43approvedNo
782amnoncommon fish farm, skin, portuguese republic, sparus aurata, ria formosa, open water pond, seabream2021-05-07v41 / 52approvedNo
782amnon high in adult organism age 3 years compared to juvenile organism age 1-2 years in fish farm gill portuguese republic sparus aurata ria formosa open water pond seabream 2021-05-06v41 / 66approvedNo
782amnon high in juvenile organism age 1 year compared to adult organism age 3 years in fish farm skin portuguese republic dicentrarchus labrax ria formosa open water pond seabass 2021-05-07v41 / 67approvedNo
782amnoncommon fish farm, skin, portuguese republic, dicentrarchus labrax, ria formosa, open water pond, seabass2021-05-07v41 / 72approvedNo
782amnoncommon fish farm, gill, portuguese republic, dicentrarchus labrax, ria formosa, open water pond, seabass2021-05-07v41 / 82approvedNo
782amnon high in juvenile organism age 1 year compared to adult organism age 3 years in fish farm gill portuguese republic dicentrarchus labrax ria formosa open water pond seabass 2021-05-07v41 / 87approvedNo
782amnon high in gill compared to skin in fish farm portuguese republic dicentrarchus labrax ria formosa open water pond seabass 2021-05-06v41 / 114approvedNo
782amnon high in gill compared to skin in fish farm portuguese republic sparus aurata ria formosa open water pond seabream 2021-05-06v41 / 132approvedNo
782amnon high in adult organism age 3 years compared to juvenile organism age 1 year in fish farm gill portuguese republic dicentrarchus labrax ria formosa open water pond seabass 2021-05-07v41 / 147approvedNo
782amnon high in sparus aurata seabream compared to dicentrarchus labrax seabass in fish farm skin portuguese republic ria formosa open water pond 2021-05-06v41 / 149approvedNo
782amnon high in sparus aurata seabream compared to dicentrarchus labrax seabass in fish farm gill portuguese republic ria formosa open water pond 2021-05-06v41 / 174approvedNo
782amnon high in adult organism age 3 years compared to juvenile organism age 1 year in fish farm skin portuguese republic dicentrarchus labrax ria formosa open water pond seabass 2021-05-07v41 / 183approvedNo
782amnon high in skin compared to gill in fish farm portuguese republic dicentrarchus labrax ria formosa open water pond seabass 2021-05-06v41 / 304approvedNo
782amnon high in skin compared to gill in fish farm portuguese republic sparus aurata ria formosa open water pond seabream 2021-05-06v41 / 325approvedNo
782amnon high in dicentrarchus labrax seabass compared to sparus aurata seabream in fish farm skin portuguese republic ria formosa open water pond 2021-05-06v41 / 419approvedNo
782amnon high in dicentrarchus labrax seabass compared to sparus aurata seabream in fish farm gill portuguese republic ria formosa open water pond 2021-05-06v41 / 477approvedNo

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