Experiment ID: 789

Field Description
nameinfluence of taxonomic and functional content of microbial communities on the quality of fermented cocoa pulp-bean mass
doidoi:10.1128/aem.00425-21
sraprjna627078
mapmd50583a73484882e1a1ec14a91f668d217
datamd5a577ff8495e79f9d0167b305c214adb6

Annotations for experiment:

term enrichment score
TermScore
cocoa mass0.666667
theobroma cacao0.666667
state of tabasco0.666667
time 5 days0.428571
fermented cocoa mass0.428571
cocoa strain forasterio0.333333
cocoa strain criollo0.333333
mexico0.222222
LOWER IN time 5 days0.200000
LOWER IN fermented cocoa mass0.200000
time 00.181818
LOWER IN time 00.181818
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN time 5 days0.500000
LOWER IN fermented cocoa mass0.500000
cocoa mass0.500000
theobroma cacao0.500000
state of tabasco0.500000
cocoa strain forasterio0.500000
cocoa strain criollo0.500000
time 5 days0.500000
fermented cocoa mass0.500000
time 00.333333
LOWER IN time 00.333333
mexico0.125000
Fraction of annotations for the query sequences containing the term
TermScore
mexico1.000000
cocoa mass1.000000
theobroma cacao1.000000
state of tabasco1.000000
time 5 days0.375000
fermented cocoa mass0.375000
cocoa strain forasterio0.250000
cocoa strain criollo0.250000
time 00.125000
LOWER IN time 5 days0.125000
LOWER IN fermented cocoa mass0.125000
LOWER IN time 00.125000
Exp. ID User ID Description Date Region Flag Sequences
789amnondominant in traditionally harvested cocoa pulp after fementation (dominant mexico, cocoa mass, theobroma cacao, state of tabasco, time 5 days, fermented cocoa mass)2021-06-01v3No1 / 12
789amnondominant in traditionally harvested cocoa pulp before fementation (dominant mexico, cocoa mass, theobroma cacao, state of tabasco, cocoa strain forasterio)2021-06-01v3No1 / 13
789amnondominant in traditionally harvested cocoa pulp before fementation (dominant mexico, cocoa mass, theobroma cacao, state of tabasco, cocoa strain criollo)2021-06-01v3No1 / 13
789amnoncommon in traditionally harvested cocoa pulp after fementation (common mexico, cocoa mass, theobroma cacao, state of tabasco, time 5 days, fermented cocoa mass)2021-06-01v3No1 / 35
789amnonlow in unfemented compared to fermented cocoa mass ( high in time 5 days fermented cocoa mass compared to time 0 in mexico cocoa mass theobroma cacao state of tabasco )2021-06-01v3No1 / 43
789amnoncommon in traditionally harvested cocoa pulp before fementation (common mexico, cocoa mass, theobroma cacao, state of tabasco, cocoa strain criollo)2021-06-01v3No1 / 67
789amnoncommon in traditionally harvested cocoa pulp before fementation (common mexico, cocoa mass, theobroma cacao, state of tabasco, cocoa strain forasterio)2021-06-01v3No1 / 82
789amnonhigh in unfemented compared to fermented cocoa mass ( high in time 0 compared to time 5 days fermented cocoa mass in mexico cocoa mass theobroma cacao state of tabasco )2021-06-01v3No1 / 121

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