Experiment ID: 789

Field Description
nameinfluence of taxonomic and functional content of microbial communities on the quality of fermented cocoa pulp-bean mass
doidoi:10.1128/aem.00425-21
sraprjna627078
mapmd50583a73484882e1a1ec14a91f668d217
datamd5a577ff8495e79f9d0167b305c214adb6

Annotations for experiment:

term enrichment score
TermScore
state of tabasco0.666667
cocoa mass0.666667
theobroma cacao0.666667
time 5 days0.428571
fermented cocoa mass0.428571
cocoa strain forasterio0.333333
cocoa strain criollo0.333333
mexico0.250000
LOWER IN fermented cocoa mass0.200000
LOWER IN time 5 days0.200000
time 00.200000
LOWER IN time 00.181818
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN fermented cocoa mass0.500000
LOWER IN time 5 days0.500000
time 00.500000
state of tabasco0.500000
cocoa mass0.500000
theobroma cacao0.500000
cocoa strain forasterio0.500000
cocoa strain criollo0.500000
time 5 days0.500000
fermented cocoa mass0.500000
LOWER IN time 00.333333
mexico0.142857
Fraction of annotations for the query sequences containing the term
TermScore
state of tabasco1.000000
mexico1.000000
cocoa mass1.000000
theobroma cacao1.000000
time 5 days0.375000
fermented cocoa mass0.375000
cocoa strain forasterio0.250000
cocoa strain criollo0.250000
LOWER IN fermented cocoa mass0.125000
LOWER IN time 5 days0.125000
time 00.125000
LOWER IN time 00.125000
Exp. ID User ID Description Date Region Flag Sequences
789amnondominant in traditionally harvested cocoa pulp after fementation (dominant fermented cocoa mass, time 5 days, state of tabasco, mexico, cocoa mass, theobroma cacao)2021-06-01v3No1 / 12
789amnondominant in traditionally harvested cocoa pulp before fementation (dominant cocoa strain forasterio, state of tabasco, mexico, cocoa mass, theobroma cacao)2021-06-01v3No1 / 13
789amnondominant in traditionally harvested cocoa pulp before fementation (dominant state of tabasco, cocoa strain criollo, mexico, cocoa mass, theobroma cacao)2021-06-01v3No1 / 13
789amnoncommon in traditionally harvested cocoa pulp after fementation (common fermented cocoa mass, time 5 days, state of tabasco, mexico, cocoa mass, theobroma cacao)2021-06-01v3No1 / 35
789amnonlow in unfemented compared to fermented cocoa mass ( high in time 5 days fermented cocoa mass compared to time 0 in state of tabasco mexico cocoa mass theobroma cacao )2021-06-01v3No1 / 43
789amnoncommon in traditionally harvested cocoa pulp before fementation (common state of tabasco, cocoa strain criollo, mexico, cocoa mass, theobroma cacao)2021-06-01v3No1 / 67
789amnoncommon in traditionally harvested cocoa pulp before fementation (common cocoa strain forasterio, state of tabasco, mexico, cocoa mass, theobroma cacao)2021-06-01v3No1 / 82
789amnonhigh in unfemented compared to fermented cocoa mass ( high in time 0 compared to fermented cocoa mass time 5 days in state of tabasco mexico cocoa mass theobroma cacao )2021-06-01v3No1 / 121

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