Experiment ID: 805

Field Description
nameenrichment of the airway microbiome in people living with hiv with potential pathogenic bacteria despite antiretroviral therapy
doihttps://doi.org/10.1016/j.eclinm.2020.100427
sraprjeb32399
mapmd5005ea31d1e0e2503bf77c73fd33b3eef
datamd569a17ccf8effba3db2979ff3bdae6502

Annotations for experiment:

term enrichment score
TermScore
city of london0.500000
sputum0.333333
LOWER IN cigarette smoking0.285714
LOWER IN smoker0.285714
cigarette smoking0.285714
smoker0.285714
non-smoker0.250000
LOWER IN non-smoker0.250000
LOWER IN nicotine dependence0.222222
nicotine dependence0.222222
united kingdom0.080000
adult0.010695
homo sapiens0.006897
Fraction of dbbact annotations with this term covered by the query
TermScore
city of london0.333333
LOWER IN cigarette smoking0.333333
LOWER IN smoker0.333333
cigarette smoking0.333333
smoker0.333333
non-smoker0.250000
LOWER IN non-smoker0.250000
sputum0.200000
LOWER IN nicotine dependence0.200000
nicotine dependence0.200000
united kingdom0.041667
adult0.005376
homo sapiens0.003460
Fraction of annotations for the query sequences containing the term
TermScore
sputum1.000000
city of london1.000000
united kingdom1.000000
adult1.000000
homo sapiens1.000000
LOWER IN cigarette smoking0.250000
LOWER IN nicotine dependence0.250000
LOWER IN smoker0.250000
non-smoker0.250000
LOWER IN non-smoker0.250000
nicotine dependence0.250000
cigarette smoking0.250000
smoker0.250000
Number of experiments associating the term to the sequence
TermScore
sputum1.000000
city of london1.000000
united kingdom1.000000
adult1.000000
homo sapiens1.000000
LOWER IN cigarette smoking1.000000
LOWER IN nicotine dependence1.000000
LOWER IN smoker1.000000
non-smoker1.000000
LOWER IN non-smoker1.000000
nicotine dependence1.000000
cigarette smoking1.000000
smoker1.000000

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