dbBact

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Experiment ID: 815

Field	Description
name	https://doi.org/10.1007/s00248-021-01806-8
name	comparative analyses of the gut microbiome of two fox species, the red fox (vulpes vulpes) and corsac fox (vulpes corsac), that occupy different ecological niches
sra	prjna646772
mapmd5	04cf12cb91d614a20ab7214d48d4a2aa
datamd5	c678924b780caebc593ed1bbe2961d66

Annotations for experiment:

term enrichment score

Term	Score
lake hulun	0.666667
red fox	0.500000
vulpes vulpes	0.500000
corsac fox	0.500000
vulpes corsac	0.500000
mongolia	0.333333
LOWER IN vulpes vulpes	0.250000
LOWER IN red fox	0.250000
LOWER IN corsac fox	0.250000
LOWER IN vulpes corsac	0.250000
winter	0.100000
wild	0.074074
feces	0.005780

Fraction of dbbact annotations with this term covered by the query

Term	Score
lake hulun	0.500000
red fox	0.500000
vulpes vulpes	0.500000
corsac fox	0.500000
vulpes corsac	0.500000
LOWER IN vulpes vulpes	0.500000
LOWER IN red fox	0.500000
LOWER IN corsac fox	0.500000
LOWER IN vulpes corsac	0.500000
mongolia	0.200000
winter	0.052632
wild	0.038462
feces	0.002899

Fraction of annotations for the query sequences containing the term

Term	Score
lake hulun	1.000000
wild	1.000000
winter	1.000000
mongolia	1.000000
feces	1.000000
red fox	0.500000
vulpes vulpes	0.500000
corsac fox	0.500000
vulpes corsac	0.500000
LOWER IN vulpes vulpes	0.166667
LOWER IN red fox	0.166667
LOWER IN corsac fox	0.166667
LOWER IN vulpes corsac	0.166667

Number of experiments associating the term to the sequence

Term	Score
lake hulun	1.000000
wild	1.000000
winter	1.000000
mongolia	1.000000
red fox	1.000000
vulpes vulpes	1.000000
feces	1.000000
corsac fox	1.000000
vulpes corsac	1.000000
LOWER IN vulpes vulpes	1.000000
LOWER IN red fox	1.000000
LOWER IN corsac fox	1.000000
LOWER IN vulpes corsac	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
815	amnon	high in red fox vulpes vulpes compared to corsac fox vulpes corsac in lake hulun wild winter mongolia feces	2021-07-04	v3	1 / 12	approved	No
815	amnon	high in vulpes corsac corsac fox compared to vulpes vulpes red fox in lake hulun wild winter mongolia feces	2021-07-04	v3	1 / 15	approved	No
815	amnon	dominant lake hulun, wild, winter, mongolia, red fox, vulpes vulpes, feces	2021-07-04	v3	1 / 24	approved	No
815	amnon	dominant corsac fox, vulpes corsac, lake hulun, wild, winter, mongolia, feces	2021-07-04	v3	1 / 27	approved	No
815	amnon	common corsac fox, vulpes corsac, lake hulun, wild, winter, mongolia, feces	2021-07-04	v3	1 / 146	approved	No
815	amnon	common lake hulun, wild, winter, mongolia, red fox, vulpes vulpes, feces	2021-07-04	v3	1 / 160	approved	No

Problems / suggestions? Please email info AT dbbact DOT org