Experiment ID: 817

Field Description
nameprofiling the airway in the macaque model of tuberculosis reveals variable microbial dysbiosis and alteration of community structure
sraprjna436553
doihttps://doi.org/10.1186/s40168-018-0560-y
datamd50602a3b728b146a8cc6a2549d1d29afb
mapmd5d829a9077eb81866e80e438a6f1f611d

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
cheek pouch0.500000
macaca fascicularis0.500000
cynomolgus macaque0.500000
LOWER IN lung0.500000
LOWER IN bronchoalveolar lavage0.500000
LOWER IN cheek pouch0.500000
LOWER IN oral wash0.250000
LOWER IN oral cavity0.200000
bronchoalveolar lavage0.142857
oral wash0.125000
lung0.100000
commonwealth of pennsylvania0.083333
oral cavity0.052632
LOWER IN saliva0.052632
captive0.034483
saliva0.018519
research facility0.005587
united states of america0.003546
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
research facility1.000000
commonwealth of pennsylvania1.000000
captive1.000000
macaca fascicularis1.000000
cynomolgus macaque1.000000
saliva0.500000
oral cavity0.500000
oral wash0.500000
cheek pouch0.500000
lung0.500000
bronchoalveolar lavage0.500000
LOWER IN lung0.166667
LOWER IN bronchoalveolar lavage0.166667
LOWER IN saliva0.166667
LOWER IN oral cavity0.166667
LOWER IN oral wash0.166667
LOWER IN cheek pouch0.166667
Number of experiments associating the term to the sequence
TermScore
united states of america1.000000
research facility1.000000
saliva1.000000
oral cavity1.000000
commonwealth of pennsylvania1.000000
oral wash1.000000
captive1.000000
cheek pouch1.000000
macaca fascicularis1.000000
cynomolgus macaque1.000000
LOWER IN lung1.000000
LOWER IN bronchoalveolar lavage1.000000
lung1.000000
bronchoalveolar lavage1.000000
LOWER IN saliva1.000000
LOWER IN oral cavity1.000000
LOWER IN oral wash1.000000
LOWER IN cheek pouch1.000000

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