dbBact

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Experiment ID: 90

Field	Description
name	high-throughput sequencing of microbial community diversity and dynamics during douchi fermentation
sra	srp078259
datamd5	118a064473558e8d1ae9c5d13ab42b0c
mapmd5	4906f77ba2fc37f36598c3edf17b3201

Annotations for experiment:

term enrichment score

Term	Score
douchi	0.571429
timepoint	0.400000
koji	0.400000
late timepoint	0.285714
LOWER IN early timepoint	0.285714
food (fermented)	0.222222
early timepoint	0.200000
LOWER IN late timepoint	0.200000
china	0.010753

Fraction of dbbact annotations with this term covered by the query

Term	Score
douchi	0.500000
koji	0.500000
timepoint	0.333333
late timepoint	0.250000
LOWER IN early timepoint	0.250000
early timepoint	0.250000
LOWER IN late timepoint	0.250000
food (fermented)	0.125000
china	0.005405

Fraction of annotations for the query sequences containing the term

Term	Score
china	1.000000
food (fermented)	1.000000
douchi	0.666667
timepoint	0.500000
late timepoint	0.333333
LOWER IN early timepoint	0.333333
koji	0.333333
early timepoint	0.166667
LOWER IN late timepoint	0.166667

Number of experiments associating the term to the sequence

Term	Score
douchi	1.000000
china	1.000000
food (fermented)	1.000000
timepoint	1.000000
late timepoint	1.000000
LOWER IN early timepoint	1.000000
koji	1.000000
early timepoint	1.000000
LOWER IN late timepoint	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
90	amnon	decreases during douchi fermentation ( high in timepoint early timepoint compared to late timepoint in douchi china food (fermented) )	2017-03-08	v4	1 / 2	approved	No
90	amnon	dominant koji, china, food (fermented)	2017-03-08	v4	1 / 3	approved	No
90	amnon	increases during koji preparation ( high in timepoint late timepoint compared to early timepoint in koji china food (fermented) )	2017-03-08	v4	1 / 8	approved	No
90	amnon	dominant douchi, china, food (fermented)	2017-03-08	v4	1 / 17	approved	No
90	amnon	increases during douchi fermentation ( high in timepoint late timepoint compared to early timepoint in douchi china food (fermented) )	2017-03-08	v4	1 / 30	approved	No
90	amnon	common douchi, china, food (fermented)	2017-03-08	v4	1 / 61	approved	No

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