Experiment ID: 905

Field Description
namebacterial communities in the gastrointestinal tract segments of helminth-resistant and helminth-susceptible sheep
doihttps://doi.org/10.1186/s42523-022-00172-1
sraprjna674764
mapmd54f3b1b2a8054daadb710471ce670e28e
datamd5a054f7ffcec461ae2baff29d6082fb00

Annotations for experiment:

term enrichment score
TermScore
western australia0.500000
age 1 year0.333333
abomasum0.243902
LOWER IN abomasum0.171429
sheep0.166667
jejunum0.163934
ovis aries0.142857
LOWER IN jejunum0.127660
ileum0.086207
duodenum0.076923
LOWER IN ileum0.075000
australia0.071429
rumen0.070922
colon0.067797
LOWER IN rumen0.063158
LOWER IN colon0.055556
caecum0.041237
LOWER IN caecum0.036364
research facility0.012270
feces0.005690
LOWER IN feces0.005587
Fraction of dbbact annotations with this term covered by the query
TermScore
abomasum0.333333
western australia0.333333
LOWER IN abomasum0.333333
age 1 year0.200000
LOWER IN jejunum0.142857
jejunum0.142857
sheep0.090909
ovis aries0.076923
duodenum0.076923
LOWER IN ileum0.055556
ileum0.055556
LOWER IN colon0.043478
rumen0.043478
LOWER IN rumen0.043478
colon0.043478
australia0.037037
LOWER IN caecum0.023810
caecum0.023810
research facility0.006173
LOWER IN feces0.002899
feces0.002899
Fraction of annotations for the query sequences containing the term
TermScore
western australia1.000000
sheep1.000000
age 1 year1.000000
australia1.000000
ovis aries1.000000
research facility1.000000
abomasum0.192308
rumen0.192308
ileum0.192308
jejunum0.192308
feces0.153846
caecum0.153846
colon0.153846
LOWER IN abomasum0.115385
LOWER IN rumen0.115385
LOWER IN ileum0.115385
LOWER IN jejunum0.115385
LOWER IN feces0.076923
LOWER IN colon0.076923
LOWER IN caecum0.076923
duodenum0.076923
Exp. ID User ID Description Date Region Flag Sequences
905amnondominant western australia, sheep, age 1 year, australia, ovis aries, rumen, research facility2022-05-18v3No1 / 5
905amnondominant western australia, sheep, age 1 year, australia, ovis aries, abomasum, research facility2022-05-18v3No1 / 8
905amnondominant western australia, sheep, age 1 year, australia, ovis aries, ileum, research facility2022-05-18v3No1 / 9
905amnondominant western australia, sheep, age 1 year, australia, ovis aries, colon, research facility2022-05-18v3No1 / 9
905amnondominant western australia, sheep, age 1 year, australia, ovis aries, jejunum, research facility2022-05-18v3No1 / 9
905amnondominant western australia, sheep, age 1 year, australia, ovis aries, caecum, research facility2022-05-18v3No1 / 10
905amnondominant western australia, sheep, age 1 year, australia, ovis aries, research facility, feces2022-05-18v3No1 / 10
905amnondominant western australia, sheep, age 1 year, australia, ovis aries, duodenum, research facility2022-05-18v3No1 / 15
905amnon high in jejunum compared to ileum in western australia sheep age 1 year australia ovis aries research facility 2022-05-19v3No1 / 32
905amnon high in ileum compared to jejunum in western australia sheep age 1 year australia ovis aries research facility 2022-05-19v3No1 / 61
905amnon high in abomasum compared to rumen in western australia sheep age 1 year australia ovis aries research facility 2022-05-19v3No1 / 78
905amnoncommon jejunum, western australia, sheep, age 1 year, australia, ovis aries, research facility2022-05-18v3No1 / 114
905amnoncommon ileum, western australia, sheep, age 1 year, australia, ovis aries, research facility2022-05-18v3No1 / 137
905amnoncommon duodenum, western australia, sheep, age 1 year, australia, ovis aries, research facility2022-05-18v3No1 / 200
905amnon high in rumen compared to abomasum in western australia sheep age 1 year australia ovis aries research facility 2022-05-19v3No1 / 264
905amnoncommon feces, western australia, sheep, age 1 year, australia, ovis aries, research facility2022-05-18v3No1 / 401
905amnoncommon caecum, western australia, sheep, age 1 year, australia, ovis aries, research facility2022-05-18v3No1 / 417
905amnoncommon abomasum, age 1 year, western australia, research facility, australia, ovis aries, sheep2022-05-18v3No1 / 460
905amnoncommon colon, western australia, sheep, age 1 year, australia, ovis aries, research facility2022-05-18v3No1 / 523
905amnon high in jejunum ileum compared to abomasum rumen in western australia sheep age 1 year australia ovis aries research facility 2022-05-18v3No1 / 563
905amnoncommon rumen, western australia, sheep, age 1 year, australia, ovis aries, research facility2022-05-18v3No1 / 597
905amnon high in ileum jejunum compared to feces colon caecum in western australia sheep age 1 year australia ovis aries research facility 2022-05-18v3No1 / 1092
905amnon high in abomasum rumen compared to jejunum ileum in western australia sheep age 1 year australia ovis aries research facility 2022-05-18v3No1 / 2033
905amnon high in feces colon caecum compared to ileum jejunum in western australia sheep age 1 year australia ovis aries research facility 2022-05-18v3No1 / 2246
905amnon high in feces caecum colon compared to abomasum rumen in western australia sheep age 1 year australia ovis aries research facility 2022-05-19v3No1 / 2270
905amnon high in abomasum rumen compared to feces colon caecum in western australia sheep age 1 year australia ovis aries research facility 2022-05-19v3No1 / 2737

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