Experiment ID: 909

Field Description
namecage and maternal effects on the bacterial communities of the murine gut
doihttps://doi.org/10.1038/s41598-021-89185-5
sraprjeb6905
mapmd5ae488ff22027fd6abe23bedde7ec38e4
datamd53bd1472c2056d634a1aec0934dda263e

Annotations for experiment:

term enrichment score
TermScore
manchester0.666667
age 18 weeks0.375000
colonic mucosa0.315789
age 6 weeks0.240000
LOWER IN age 18 weeks0.200000
LOWER IN age 6 weeks0.153846
lumen of colon0.125000
LOWER IN lumen of colon0.125000
united kingdom0.080000
mouse0.032258
mus musculus0.029412
research facility0.012270
feces0.005764
LOWER IN feces0.005571
Fraction of dbbact annotations with this term covered by the query
TermScore
manchester0.500000
lumen of colon0.500000
LOWER IN lumen of colon0.500000
age 18 weeks0.333333
LOWER IN age 18 weeks0.333333
colonic mucosa0.250000
age 6 weeks0.166667
LOWER IN age 6 weeks0.166667
united kingdom0.041667
mouse0.016393
mus musculus0.014925
research facility0.006173
feces0.002899
LOWER IN feces0.002899
Fraction of annotations for the query sequences containing the term
TermScore
manchester1.000000
united kingdom1.000000
mouse1.000000
mus musculus1.000000
research facility1.000000
feces0.500000
age 6 weeks0.428571
colonic mucosa0.428571
age 18 weeks0.428571
LOWER IN age 18 weeks0.142857
LOWER IN age 6 weeks0.142857
LOWER IN feces0.071429
lumen of colon0.071429
LOWER IN lumen of colon0.071429
Exp. ID User ID Description Date Region Flag Sequences
909amnon high in age 18 weeks compared to age 6 weeks in manchester united kingdom mouse mus musculus colonic mucosa research facility 2022-05-20v3No1 / 18
909amnon high in age 18 weeks compared to age 6 weeks in manchester united kingdom mouse mus musculus research facility feces 2022-05-20v3No1 / 22
909amnondominant manchester, united kingdom, age 18 weeks, mouse, mus musculus, colonic mucosa, research facility2022-05-20v3No1 / 25
909amnondominant manchester, united kingdom, age 18 weeks, mouse, mus musculus, research facility, feces2022-05-20v3No1 / 25
909amnondominant manchester, united kingdom, age 6 weeks, mouse, mus musculus, colonic mucosa, research facility2022-05-20v3No1 / 26
909amnondominant manchester, united kingdom, age 6 weeks, mouse, mus musculus, research facility, feces2022-05-20v3No1 / 26
909amnon high in feces compared to lumen of colon in manchester united kingdom mouse mus musculus research facility 2022-05-20v3No1 / 35
909amnon high in age 6 weeks compared to age 18 weeks in colonic mucosa manchester united kingdom mouse mus musculus research facility 2022-05-20v3No1 / 39
909amnon high in age 6 weeks compared to age 18 weeks in united kingdom manchester research facility mus musculus mouse feces 2022-05-20v3No1 / 41
909amnon high in lumen of colon compared to feces in manchester united kingdom mouse mus musculus research facility 2022-05-20v3No1 / 53
909amnoncommon age 18 weeks, manchester, united kingdom, mouse, mus musculus, colonic mucosa, research facility2022-05-20v3No1 / 161
909amnoncommon age 18 weeks, manchester, united kingdom, mouse, mus musculus, research facility, feces2022-05-20v3No1 / 161
909amnoncommon age 6 weeks, manchester, united kingdom, mouse, mus musculus, colonic mucosa, research facility2022-05-20v3No1 / 168
909amnoncommon age 6 weeks, manchester, united kingdom, mouse, mus musculus, research facility, feces2022-05-20v3No1 / 168

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