Experiment ID: 910

Field Description
nameevolution of rumen and oral microbiota in calves is influenced by age and time of weaning
doihttps://doi.org/10.1186/s42523-021-00095-3
sraprjeb41435
mapmd570986aa42c6c2c83b010ddafdf291f83
datamd5f8f6c5d146f1ce6c6c5dad0b3e8f60e5

Annotations for experiment:

term enrichment score
TermScore
calve0.500000
age 140 days0.424242
holstein dairy cow0.400000
juvenile stage0.400000
age 70 days0.285714
age 42 days0.222222
mouth mucosa0.176471
LOWER IN age 70 days0.133333
LOWER IN age 140 days0.133333
oral cavity0.122449
bos taurus0.105263
LOWER IN mouth mucosa0.090909
rumen0.074074
LOWER IN oral cavity0.074074
germany0.060606
LOWER IN rumen0.057143
research facility0.012270
Fraction of dbbact annotations with this term covered by the query
TermScore
age 140 days0.333333
calve0.333333
LOWER IN age 70 days0.333333
LOWER IN age 140 days0.333333
age 70 days0.333333
age 42 days0.333333
holstein dairy cow0.250000
juvenile stage0.250000
LOWER IN mouth mucosa0.100000
mouth mucosa0.100000
LOWER IN oral cavity0.066667
oral cavity0.066667
bos taurus0.055556
rumen0.043478
LOWER IN rumen0.043478
germany0.031250
research facility0.006173
Fraction of annotations for the query sequences containing the term
TermScore
holstein dairy cow1.000000
calve1.000000
germany1.000000
bos taurus1.000000
juvenile stage1.000000
research facility1.000000
mouth mucosa0.750000
oral cavity0.750000
age 140 days0.583333
rumen0.250000
age 70 days0.250000
age 42 days0.166667
LOWER IN mouth mucosa0.083333
LOWER IN oral cavity0.083333
LOWER IN rumen0.083333
LOWER IN age 70 days0.083333
LOWER IN age 140 days0.083333
Exp. ID User ID Description Date Region Flag Sequences
910amnondominant age 140 days, holstein dairy cow, calve, germany, bos taurus, rumen, juvenile stage, research facility2022-05-20v1No1 / 6
910amnondominant age 140 days, holstein dairy cow, calve, germany, bos taurus, mouth mucosa, oral cavity, juvenile stage, research facility2022-05-20v1No1 / 9
910amnondominant age 70 days, holstein dairy cow, calve, germany, bos taurus, mouth mucosa, oral cavity, juvenile stage, research facility2022-05-20v1No1 / 10
910amnondominant holstein dairy cow, age 42 days, calve, germany, bos taurus, mouth mucosa, oral cavity, juvenile stage, research facility2022-05-20v1No1 / 15
910amnoncommon age 70 days, holstein dairy cow, calve, germany, bos taurus, mouth mucosa, oral cavity, juvenile stage, research facility2022-05-20v1No1 / 191
910amnoncommon age 42 days, holstein dairy cow, calve, germany, bos taurus, mouth mucosa, oral cavity, juvenile stage, research facility2022-05-20v1No1 / 202
910amnoncommon mouth mucosa, oral cavity, age 140 days, holstein dairy cow, calve, germany, bos taurus, juvenile stage, research facility2022-05-20v1No1 / 245
910amnon high in age 70 days compared to age 140 days in holstein dairy cow calve germany bos taurus mouth mucosa oral cavity juvenile stage research facility 2022-05-20v1No1 / 276
910amnon high in age 140 days compared to age 70 days in holstein dairy cow calve germany bos taurus mouth mucosa oral cavity juvenile stage research facility 2022-05-20v1No1 / 302
910amnoncommon rumen, age 140 days, holstein dairy cow, calve, germany, bos taurus, juvenile stage, research facility2022-05-20v1No1 / 510
910amnon high in mouth mucosa oral cavity compared to rumen in research facility germany juvenile stage age 140 days holstein dairy cow calve bos taurus 2022-05-20v1No1 / 1194
910amnon high in rumen compared to mouth mucosa oral cavity in age 140 days holstein dairy cow calve germany bos taurus juvenile stage research facility 2022-05-20v1No1 / 1744

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