dbBact

Experiment ID: 933

Field	Description
name	a comparison of rhizospheric and endophytic bacteria in early and late-maturing pumpkin varieties
sra	prjna856634
doi	https://doi.org/10.3390/microorganisms10081667
datamd5	2c9912c97a8b23d0118708cb02e961fb
mapmd5	526809714d9a224eb85885d3c764fb53

Annotations for experiment:

term enrichment score

Term	Score
cucurbita moschata	0.666667
pumpkin	0.666667
quaternary laterite soil	0.666667
guangxi zhuang autonomous region	0.500000
ph 5.5	0.500000
rhizosphere	0.038462
research facility	0.010638
china	0.009615

Fraction of dbbact annotations with this term covered by the query

Term	Score
cucurbita moschata	0.500000
pumpkin	0.500000
quaternary laterite soil	0.500000
guangxi zhuang autonomous region	0.333333
ph 5.5	0.333333
rhizosphere	0.019608
research facility	0.005348
china	0.004831

Fraction of annotations for the query sequences containing the term

Term	Score
research facility	1.000000
rhizosphere	1.000000
guangxi zhuang autonomous region	1.000000
ph 5.5	1.000000
china	1.000000
cucurbita moschata	1.000000
pumpkin	1.000000
quaternary laterite soil	1.000000

Number of experiments associating the term to the sequence

Term	Score
research facility	1.000000
rhizosphere	1.000000
guangxi zhuang autonomous region	1.000000
ph 5.5	1.000000
china	1.000000
cucurbita moschata	1.000000
pumpkin	1.000000
quaternary laterite soil	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
933	amnon	dominant research facility, rhizosphere, guangxi zhuang autonomous region, ph 5.5, china, cucurbita moschata, pumpkin, quaternary laterite soil	2022-09-11	v3	1 / 6	approved	No
933	amnon	common research facility, rhizosphere, guangxi zhuang autonomous region, ph 5.5, china, cucurbita moschata, pumpkin, quaternary laterite soil	2022-09-11	v3	1 / 1002	approved	No

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