Experiment ID: 975

Field Description
namemicrobiomes of hadal fishes across trench habitats contain similar taxa and known piezophiles
doihttps://doi.org/10.1128/msphere.00032-22
sraprjna720542
mapmd5b8c6e8680fc11b626c0b431f44642c5b
datamd58188dbddb22a9b41961e97712460767a

Annotations for experiment:

term enrichment score
TermScore
gut content0.666667
isla coronado norte0.666667
hadal snailfish0.444444
depth (water) 5000-10000m0.444444
hindgut0.400000
dragonfish0.250000
stomiidae0.250000
snailfish0.250000
careproctus melanurus0.250000
lanternfish0.250000
myctophidae0.250000
bristlemouths0.250000
gonostomatidae <vertebrata>0.250000
argyropelecus affinis0.250000
hatchetfish0.250000
kermadec trench0.250000
notoliparis kermadecensis0.250000
marinas trench0.250000
pseudoliparis swirei0.250000
depth (water) 500-1000m0.228571
san diego0.181818
depth (water) 100-500m0.133333
fish0.125000
intestine0.074074
pacific ocean0.074074
Fraction of dbbact annotations with this term covered by the query
TermScore
dragonfish1.000000
stomiidae1.000000
snailfish1.000000
careproctus melanurus1.000000
lanternfish1.000000
myctophidae1.000000
isla coronado norte1.000000
bristlemouths1.000000
gonostomatidae <vertebrata>1.000000
argyropelecus affinis1.000000
hatchetfish1.000000
kermadec trench1.000000
hadal snailfish1.000000
notoliparis kermadecensis1.000000
depth (water) 5000-10000m1.000000
marinas trench1.000000
pseudoliparis swirei1.000000
gut content0.500000
hindgut0.250000
san diego0.250000
depth (water) 500-1000m0.142857
depth (water) 100-500m0.125000
fish0.066667
intestine0.038462
pacific ocean0.038462
Fraction of annotations for the query sequences containing the term
TermScore
intestine1.000000
hindgut1.000000
gut content1.000000
pacific ocean1.000000
fish1.000000
depth (water) 500-1000m0.571429
isla coronado norte0.500000
hadal snailfish0.285714
depth (water) 5000-10000m0.285714
dragonfish0.142857
stomiidae0.142857
san diego0.142857
snailfish0.142857
careproctus melanurus0.142857
depth (water) 100-500m0.142857
lanternfish0.142857
myctophidae0.142857
bristlemouths0.142857
gonostomatidae <vertebrata>0.142857
argyropelecus affinis0.142857
hatchetfish0.142857
kermadec trench0.142857
notoliparis kermadecensis0.142857
marinas trench0.142857
pseudoliparis swirei0.142857
Exp. ID User ID Description Date Region Flag Sequences
975amnondominant fish, pacific ocean, gut content, hindgut, intestine, depth (water) 5000-10000m, hadal snailfish, pseudoliparis swirei, marinas trench2022-12-24v4No1 / 6
975amnondominant fish, pacific ocean, gut content, hindgut, intestine, depth (water) 5000-10000m, notoliparis kermadecensis, hadal snailfish, kermadec trench2022-12-24v4No1 / 7
975amnondominant fish, pacific ocean, gut content, hindgut, intestine, depth (water) 100-500m, careproctus melanurus, snailfish, san diego2022-12-24v4No1 / 7
975amnondominant isla coronado norte, fish, pacific ocean, gut content, hindgut, intestine, stomiidae, dragonfish, depth (water) 500-1000m2022-12-24v4No1 / 8
975amnondominant fish, pacific ocean, gut content, hindgut, intestine, gonostomatidae <vertebrata>, bristlemouths, depth (water) 500-1000m, isla coronado norte2022-12-24v4No1 / 11
975amnoncommon argyropelecus affinis, fish, pacific ocean, hatchetfish, gut content, hindgut, intestine, isla coronado norte, depth (water) 500-1000m2022-12-24v4No1 / 12
975amnoncommon marinas trench, pseudoliparis swirei, hadal snailfish, depth (water) 5000-10000m, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v4No1 / 13
975amnondominant fish, pacific ocean, gut content, hindgut, intestine, depth (water) 500-1000m, isla coronado norte, myctophidae, lanternfish2022-12-24v4No1 / 15
975amnoncommon kermadec trench, hadal snailfish, notoliparis kermadecensis, depth (water) 5000-10000m, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v4No1 / 17
975amnondominant argyropelecus affinis, fish, pacific ocean, hatchetfish, gut content, hindgut, intestine, isla coronado norte, depth (water) 500-1000m2022-12-24v4No1 / 18
975amnoncommon isla coronado norte, depth (water) 500-1000m, bristlemouths, gonostomatidae <vertebrata>, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v4No1 / 27
975amnoncommon lanternfish, myctophidae, isla coronado norte, depth (water) 500-1000m, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v4No1 / 54
975amnoncommon san diego, snailfish, careproctus melanurus, depth (water) 100-500m, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v4No1 / 71
975amnoncommon depth (water) 500-1000m, dragonfish, stomiidae, intestine, hindgut, gut content, pacific ocean, fish2022-12-24v4No1 / 226

Problems / suggestions? Please email info AT dbbact DOT org