Experiment ID: 978

Field Description
nameanalysis of gut microbiome profiles in common marmosets (callithrix jacchus) in health and intestinal disease
doihttps://doi.org/10.1038/s41598-022-08255-4
sraprjna659472
mapmd50a17a6096ea1030d54e9ba28f29589a3
datamd5d36cbea756d489b802c2523af69a16bb

Annotations for experiment:

Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN japanese source (clea)1.000000
new england source (neprc)1.000000
callithrix jacchus1.000000
marmosets1.000000
LOWER IN new england source (neprc)1.000000
japanese source (clea)1.000000
boston0.500000
rectal swab0.200000
LOWER IN rectal swab0.200000
commonwealth of massachusetts0.111111
monkey0.066667
captive0.047619
inflammatory bowel disease0.033333
LOWER IN inflammatory bowel disease0.033333
research facility0.006173
LOWER IN control0.005263
control0.005263
united states of america0.003861
feces0.002899
LOWER IN feces0.002899
Fraction of annotations for the query sequences containing the term
TermScore
monkey1.000000
callithrix jacchus1.000000
marmosets1.000000
captive1.000000
research facility1.000000
rectal swab0.700000
feces0.300000
inflammatory bowel disease0.200000
LOWER IN inflammatory bowel disease0.200000
boston0.200000
commonwealth of massachusetts0.200000
united states of america0.200000
LOWER IN japanese source (clea)0.100000
new england source (neprc)0.100000
LOWER IN new england source (neprc)0.100000
japanese source (clea)0.100000
LOWER IN control0.100000
control0.100000
LOWER IN feces0.100000
LOWER IN rectal swab0.100000
Exp. ID User ID Description Date Region Flag Sequences
978amnon high in feces compared to rectal swab in monkey callithrix jacchus marmosets captive research facility united states of america commonwealth of massachusetts boston 2022-12-24v4No1 / 1
978amnon high in rectal swab compared to feces in boston commonwealth of massachusetts united states of america research facility captive marmosets callithrix jacchus monkey 2022-12-24v4No1 / 3
978amnon high in control compared to inflammatory bowel disease inflammatory bowel disease in rectal swab research facility captive marmosets callithrix jacchus monkey 2022-12-24v4No1 / 16
978amnon high in inflammatory bowel disease inflammatory bowel disease compared to control in monkey callithrix jacchus marmosets captive research facility rectal swab 2022-12-24v4No1 / 21
978amnondominant feces, monkey, callithrix jacchus, marmosets, captive, research facility2022-12-24v4No1 / 23
978amnondominant monkey, callithrix jacchus, marmosets, captive, research facility, rectal swab2022-12-24v4No1 / 24
978amnoncommon research facility, captive, marmosets, callithrix jacchus, monkey, feces2022-12-24v4No1 / 60
978amnoncommon rectal swab, research facility, captive, marmosets, callithrix jacchus, monkey2022-12-24v4No1 / 69
978amnon high in japanese source (clea) compared to new england source (neprc) in rectal swab research facility captive marmosets callithrix jacchus monkey 2022-12-24v4No1 / 91
978amnon high in new england source (neprc) compared to japanese source (clea) in monkey callithrix jacchus marmosets captive research facility rectal swab 2022-12-24v4No1 / 128

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