dbBact

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Experiment ID: 985

Field	Description
name	determinants and interactions of oral bacterial and fungal microbiota in healthy chinese adults
doi	https://doi.org/10.1128/spectrum.02410-21
sra	prjna778006
mapmd5	ec40ccff9f7fc808ea9d587b68961b49
datamd5	a64e75881845f51dcc1a5a592192b604

Annotations for experiment:

term enrichment score

Term	Score
oral rinse	1.000000
hong kong	0.500000
LOWER IN dentures	0.222222
gingival bleeding	0.222222
dentures	0.222222
LOWER IN gingival bleeding	0.222222
LOWER IN third decade human stage	0.153846
third decade human stage	0.153846
human late adulthood stage	0.100000
LOWER IN human late adulthood stage	0.100000
saliva	0.041667
adult	0.010695
control	0.010309
LOWER IN control	0.010309
homo sapiens	0.006897

Fraction of dbbact annotations with this term covered by the query

Term	Score
oral rinse	1.000000
LOWER IN dentures	1.000000
gingival bleeding	1.000000
dentures	1.000000
LOWER IN gingival bleeding	1.000000
hong kong	0.333333
LOWER IN third decade human stage	0.200000
third decade human stage	0.200000
human late adulthood stage	0.083333
LOWER IN human late adulthood stage	0.083333
saliva	0.021277
adult	0.005376
control	0.005263
LOWER IN control	0.005263
homo sapiens	0.003460

Fraction of annotations for the query sequences containing the term

Term	Score
oral rinse	1.000000
saliva	1.000000
adult	1.000000
hong kong	1.000000
homo sapiens	1.000000
control	0.250000
LOWER IN control	0.250000
LOWER IN third decade human stage	0.125000
human late adulthood stage	0.125000
LOWER IN human late adulthood stage	0.125000
third decade human stage	0.125000
LOWER IN dentures	0.125000
gingival bleeding	0.125000
dentures	0.125000
LOWER IN gingival bleeding	0.125000

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
985	amnon	high in control compared to gingival bleeding in homo sapiens hong kong adult saliva oral rinse	2022-12-26	v1	No	1 / 2
985	amnon	high in gingival bleeding compared to control in oral rinse saliva adult hong kong homo sapiens	2022-12-26	v1	No	1 / 6
985	amnon	high in dentures compared to control in oral rinse saliva adult hong kong homo sapiens	2022-12-26	v1	No	1 / 6
985	amnon	high in control compared to dentures in homo sapiens hong kong adult saliva oral rinse	2022-12-26	v1	No	1 / 7
985	amnon	dominant homo sapiens, hong kong, adult, saliva, oral rinse	2022-12-26	v1	No	1 / 21
985	amnon	high in third decade human stage compared to human late adulthood stage in oral rinse saliva adult hong kong homo sapiens	2022-12-26	v1	No	1 / 45
985	amnon	high in human late adulthood stage compared to third decade human stage in homo sapiens hong kong adult saliva oral rinse	2022-12-26	v1	No	1 / 56
985	amnon	common oral rinse, saliva, adult, hong kong, homo sapiens	2022-12-26	v1	No	1 / 84

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