dbBact taxonomy

Taxonomy	Sequence	Recall
d__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Veillonellaceae;g__Selenomonas	TACGTAGGTGGCGAGCGTTGTCCGGAATCATTGGGCGTAAAGGGAGCGCAGGCGGGCATGTAAGTCTTTCTTAAAAGTGCGGGGCTCAACCCCGTGATGGGAAAGAAACTATGTGTCTTGAGTACAGGAGAGGAAAGCGGAATTCCCAGT	0.500000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus	TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGT	0.375000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales	TACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTCCTTAAGTCTGATGTGAAAGCCCCCGGCTCAACCGGGGAGGGTCATTGGAAACTGGGGAACTTGAGTGCAGAAGAGGAGAGTGGAATTCCATG	0.375000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus	TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTGGAAACTGTTTAACTTGAGTGCAGAAGGGGAGAGTGGAATTCCATGT	0.375000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus	TACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTTGATAAGTCTGAAGTTAAAGGCTGTGGCTCAACCATAGTTCGCTTTGGAAACTGTCAAACTTGAGTGCAGAAGGGGAGAGTGGAATTCCATGT	0.375000
d__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Veillonellaceae;g__Megasphaera	TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGGGCGCGCAGGCGGCTTCTTAAGTCTGTCTTAAAAGTGCGGGGCTTAACCCCGTGATGGGATGGAAACTGGGAAGCTCAGAGTATCGGAGAGGAAAGCGGAATTCCTAG	0.375000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae	TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGTGTAGGTGGCCATGCAAGTCAGAAGTGAAAATCCGGGGCTCAACCCCGGAACTGCTTTTGAAACTGTGAGGCTAGAGTGCAGGAGGGGTGAGTGGAATTCCTAG	0.375000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae	TACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCAGACGGCACTGCAAGTCTGAAGTGAAAGCCCGGGGCTCAACCCCGGGACTGCTTTGGAAACTGTAGAGCTAGAGTGCTGGAGAGGCAAGCGGAATTCCTAG	0.375000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Roseburia	TACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCAGGCGGTGCGGCAAGTCTGATGTGAAAGCCCGGGGCTCAACCCCGGTACTGCATTGGAAACTGTCGTACTAGAGTGTCGGAGGGGTAAGCGGAATTCCTAG	0.375000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__Streptococcus	TACGTAGGTCCCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGT	0.375000

Taxonomy	Sequence	Recall
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__Peptostreptococcus	TACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGCGTAAAGGGTGCGTAGGTGGTCCTTCAAGTCGGTGGTTAAAGGCTACGGCTCAACCGTAGTAAGCCGCCGAAACTGGAGGACTTGAGTGCAGGAGAGGAAAGTGGAATTCCCAGT	0.500000
d__Bacteria	TACGTAGGGAGCAAGCGTTATCCGGATTTATTGGGTGTAAAGGGTGCGTAGACGGGAAAATAAGTTAGTTGTGAAATCCCCATGCTTAACATGGGAACTGCAACTAAAACTGTTTTTCTTGAGTGCTGGAGAGGAAAGTGGAATTCCTAG	0.500000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillales_Incertae Sedis XI;g__Gemella	TACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGTGGTTTAATAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGTTAAACTTGAGTGCAGGAGAGAAAAGTGGAATTCCTAG	0.333333
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Actinomycetales;f__Corynebacteriaceae;g__Corynebacterium	TACGTAGGGTGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCTCGTAGGTGGTGTGTCGCGTCGTCTGTGAAATTCCGGGGCTTAACTCCGGGCGTGCAGGCGATACGGGCACGACTAGAGTGCTGTAGGGGTAACTGGAATTCCTG	0.333333
d__Bacteria;p__"Bacteroidetes"	TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGATTATTAAGTCAGTGGTGAAAGACGGTGGCTCAACCATCGTTAGCCATTGAAACTGGTAGTCTTGAGTGCAGACAGGGATGCTGGAACTCGTGGT	0.333333
d__Bacteria;p__Firmicutes	TACGTAGGTGGCAAGCGTTATCCGGAATCATTGGGCGTAAAGGGTGCGTAGGTGGCGTACTAAGTCTGTAGTAAAAGGCAATGGCTCAACCATTGTAAGCTATGGAAACTGGTAGGCTAGAGTGCAGAAGAGGGCGATGGAATTCCATGT	0.333333
d__Bacteria;p__"Bacteroidetes"	TACGGAAGGTCCAGGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGCGGATTGTTAAGTCAGCGGTTAAAGGGTGTGGCTCAACCATACATTGCCGTTGAAACTGGCGATCTTGAGTGCAGACAGGGATGCCGGAATTCGTGGT	0.333333
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae 1;g__Clostridium sensu stricto	TACGTAGGTGGCGAGCGTTGTCCGGATTTACTGGGCGTAAAGGGAGCGTAGGCGGATTTTTAAGTGAGATGTGAAATACTCGGGCTTAACCTGAGTGCTGCATTTCAAACTGGAAGTCTAGAGTGCAGGAGAGGAGAAGGGAATTCCTAG	0.333333
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae	TACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTAGGCGGGGATGCAAGTTGAATGTTTAAACTATCGGCTCAACTGATAGTCGCGTTCAAAACTGCAACTCTTGAGTGAAGTAGAGGTAGGCGGAATTCCTAGT	0.333333
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptoniphilaceae;g__Peptoniphilus	TACGTAGGGGGCTAGCGTTGTCCGGAATCACTGGGCGTAAAGGGTTCGCAGGCGGCAATGCAAGTCAGATGTAAAAGGCAAAGGCTCAACCTTTGTAAGCATCTGAAACTGTATAGCTTGAGAAGTGTAGAGGCAAGTGGAATTTTTAGT	0.333333

Taxonomy	Sequence	F-Score
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__Streptophyta	TACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTTAAGTTCTCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGAAAACTACCAAGCTAGAGTACGGTAGGGGCAGAGGGAATTTCCGG	0.500000
d__Bacteria	TACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTTAAAGTCGCCAAAAACTGGTGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTG	0.500000
d__Bacteria;p__"Bacteroidetes"	TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGCAGGCTGCGAGGCAAGTCAGCGGTCAAATGTCGGGGCTCAACCCCGGCCTGCCGTTGAAACTGTCTTGCTAGAGTTCGAGTGAGGTATGCGGAATGTGTTGT	0.500000
d__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Veillonellaceae;g__Dialister	TACGTAGGTGACAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGCTTTCTAAGTCCATCTTAAAAGTGCGGGGCTTAACCCCGTGATGGGATGGAAACTGGAAAGCTGGAGTATCGGAGAGGAAAGTGGAATTCCTAGT	0.500000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae	TACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTAGGCGGCTTTGCAAGTCAGATGTGAAATCTATGGGCTTAACCCATAAACTGCATTTGAAACTGTAGAGCTTGAGTGAAGTAGAGGCAGGCGGAATTCCCCG	0.500000
d__Bacteria;p__"Synergistetes";c__Synergistia;o__Synergistales;f__Synergistaceae;g__Cloacibacillus	TACGTAGGGGGCGAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGCAGGCTGGCCGTTAAGTCTGTCGTCAAAGGCGGAGGCTCAACCTCCGTTCTACGATAGATACTGTCGGTCTAGAGTATGTGAGAGGGAAGTGGAATTCCCGG	0.500000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__Ruminococcus	TACGTAGGGAGCGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCAGGCGGGATGGCAAGTCAGATGTGAAAACTATGGGCTCAACCCATAGACTGCATTTGAAACTGTTGTTCTTGAGTGAGGTAGAGGTAAGCGGAATTCCTGG	0.500000
d__Bacteria	TACGTAGGGGGCGAGCGTTATCCGGATTTATTGGGCGTAAAGCGTGTGTAGGCGGTTTATTAAGTTTAAGATTAAAGTCCGGGGCTCAACTCCGGTAAGTCTTAAAAACTGGTAGACTTGAGTACGGTAGAGGCAAACGGAATTTCTAGT	0.461538
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae 1;g__Clostridium sensu stricto	TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGGGAGCGTAGGCGGACTTTTAAGTGAGATGTGAAATACCCGAGCTCAACTTGGGTGCTGCATTTCAAACTGGAAGTCTAGAGTGCAGGAGAGGAGAATGGAATTCCTAG	0.461538
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae	TACGTATGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGGCGGTCTTATAAGTCTGATGTGAAAGCCCAGGGCTCAACCCCGGGACTGCATTGGAAACTGTAGGACTAGAGTGTCGGAGGGGTAAGTGGAATTCCTAG	0.461538

term enrichment score

Term	Score
65-79 year-old human stage	0.656250
LOWER IN 65-79 year-old human stage	0.535714
LOWER IN fourth decade human stage	0.363636
LOWER IN fifth decade human stage	0.285714
fourth decade human stage	0.285714
LOWER IN age >94	0.250000
LOWER IN tenth decade human stage	0.250000
age >94	0.250000
fifth decade human stage	0.250000
tenth decade human stage	0.250000
oesophageal brush	0.250000
LOWER IN ninth decade human stage	0.222222
ninth decade human stage	0.222222
esophagus	0.200000
jiangsu province	0.142857
oral wash	0.142857
soldiers	0.142857
LOWER IN soldiers	0.142857
LOWER IN young adult stage	0.142857
age 3-6	0.142857
age 8-12	0.142857
LOWER IN age 3-6	0.142857
LOWER IN age 8-12	0.142857
LOWER IN 6-12 year-old child stage	0.142857
LOWER IN third decade human stage	0.133333
young adult stage	0.125000
6-12 year-old child stage	0.125000
LOWER IN 2-5 year-old child stage	0.125000
25-44 year-old human stage	0.125000
LOWER IN 25-44 year-old human stage	0.125000
third decade human stage	0.111111
2-5 year-old child stage	0.100000
oral cavity	0.080000
LOWER IN child	0.076923
LOWER IN adult	0.064516
australia	0.055556
child	0.034483
adult	0.028417
homo sapiens	0.018405
china	0.010283
united states of america	0.006944
feces	0.005202

Fraction of dbbact annotations with this term covered by the query

Term	Score
LOWER IN 65-79 year-old human stage	0.750000
65-79 year-old human stage	0.750000
soldiers	0.500000
LOWER IN age >94	0.500000
LOWER IN tenth decade human stage	0.500000
age >94	0.500000
tenth decade human stage	0.500000
LOWER IN soldiers	0.500000
LOWER IN young adult stage	0.500000
age 3-6	0.500000
age 8-12	0.500000
LOWER IN age 3-6	0.500000
LOWER IN age 8-12	0.500000
LOWER IN 6-12 year-old child stage	0.500000
oesophageal brush	0.500000
LOWER IN fourth decade human stage	0.400000
LOWER IN fifth decade human stage	0.333333
LOWER IN ninth decade human stage	0.333333
ninth decade human stage	0.333333
LOWER IN third decade human stage	0.333333
young adult stage	0.250000
fourth decade human stage	0.250000
fifth decade human stage	0.250000
6-12 year-old child stage	0.250000
LOWER IN 2-5 year-old child stage	0.250000
esophagus	0.250000
25-44 year-old human stage	0.250000
LOWER IN 25-44 year-old human stage	0.250000
third decade human stage	0.166667
2-5 year-old child stage	0.125000
jiangsu province	0.125000
oral wash	0.125000
LOWER IN child	0.071429
oral cavity	0.052632
LOWER IN adult	0.040000
australia	0.033333
child	0.021739
adult	0.014563
homo sapiens	0.009288
china	0.005181
united states of america	0.003546
feces	0.002611

Fraction of annotations for the query sequences containing the term

Term	Score
homo sapiens	1.000000
feces	0.666667
china	0.666667
65-79 year-old human stage	0.583333
adult	0.583333
LOWER IN 65-79 year-old human stage	0.416667
LOWER IN fourth decade human stage	0.333333
fourth decade human stage	0.333333
LOWER IN fifth decade human stage	0.250000
fifth decade human stage	0.250000
LOWER IN adult	0.166667
LOWER IN age >94	0.166667
LOWER IN ninth decade human stage	0.166667
LOWER IN tenth decade human stage	0.166667
age >94	0.166667
ninth decade human stage	0.166667
tenth decade human stage	0.166667
esophagus	0.166667
australia	0.166667
oesophageal brush	0.166667
jiangsu province	0.166667
united states of america	0.166667
oral cavity	0.166667
oral wash	0.166667
soldiers	0.083333
young adult stage	0.083333
LOWER IN soldiers	0.083333
LOWER IN young adult stage	0.083333
child	0.083333
age 3-6	0.083333
age 8-12	0.083333
2-5 year-old child stage	0.083333
6-12 year-old child stage	0.083333
LOWER IN child	0.083333
LOWER IN age 3-6	0.083333
LOWER IN age 8-12	0.083333
LOWER IN 2-5 year-old child stage	0.083333
LOWER IN 6-12 year-old child stage	0.083333
third decade human stage	0.083333
25-44 year-old human stage	0.083333
LOWER IN 25-44 year-old human stage	0.083333
LOWER IN third decade human stage	0.083333

Number of experiments associating the term to the sequence

Term	Score
LOWER IN 65-79 year-old human stage	3.000000
homo sapiens	3.000000
65-79 year-old human stage	3.000000
adult	3.000000
LOWER IN fourth decade human stage	2.000000
fourth decade human stage	2.000000
soldiers	1.000000
young adult stage	1.000000
LOWER IN adult	1.000000
LOWER IN age >94	1.000000
LOWER IN fifth decade human stage	1.000000
LOWER IN ninth decade human stage	1.000000
LOWER IN tenth decade human stage	1.000000
feces	1.000000
china	1.000000
age >94	1.000000
fifth decade human stage	1.000000
ninth decade human stage	1.000000
tenth decade human stage	1.000000
LOWER IN soldiers	1.000000
LOWER IN young adult stage	1.000000
child	1.000000
age 3-6	1.000000
age 8-12	1.000000
2-5 year-old child stage	1.000000
6-12 year-old child stage	1.000000
LOWER IN child	1.000000
LOWER IN age 3-6	1.000000
LOWER IN age 8-12	1.000000
LOWER IN 2-5 year-old child stage	1.000000
LOWER IN 6-12 year-old child stage	1.000000
third decade human stage	1.000000
esophagus	1.000000
australia	1.000000
oesophageal brush	1.000000
jiangsu province	1.000000
25-44 year-old human stage	1.000000
united states of america	1.000000
oral cavity	1.000000
oral wash	1.000000
LOWER IN 25-44 year-old human stage	1.000000
LOWER IN third decade human stage	1.000000

Exp. ID	User ID	Description	Date	Region	Sequences	Status	Flag
715	amnon	high in 65-79 year-old human stage compared to third decade human stage fourth decade human stage in homo sapiens esophagus adult australia oesophageal brush	2028-05-22	v4	1 / 4	approved	No
438	amnon	dominant feces, homo sapiens, adult, jiangsu province, china, 65-79 year-old human stage	2018-12-30	v4	1 / 19	approved	No
715	amnon	high in third decade human stage fourth decade human stage compared to 65-79 year-old human stage in homo sapiens esophagus adult australia oesophageal brush	2028-05-22	v4	1 / 22	approved	No
945	amnon	high in 65-79 year-old human stage compared to 25-44 year-old human stage in homo sapiens united states of america oral cavity adult oral wash	2022-11-29	v4	1 / 63	approved	No
438	amnon	common feces, homo sapiens, adult, jiangsu province, china, 65-79 year-old human stage	2018-12-30	v4	1 / 111	approved	No
945	amnon	high in 25-44 year-old human stage compared to 65-79 year-old human stage in homo sapiens united states of america oral cavity adult oral wash	2022-11-29	v4	1 / 142	approved	No
438	amnon	lower in centenarians compared to adults ( high in 65-79 year-old human stage fourth decade human stage fifth decade human stage compared to age >94 ninth decade human stage tenth decade human stage in feces homo sapiens china )	2018-12-30	v4	1 / 203	approved	No
438	amnon	higher in students and soldiers age 19-24 compared to older adults ( high in soldiers young adult stage compared to adult age >94 65-79 year-old human stage fourth decade human stage fifth decade human stage ninth decade human stage tenth decade human stage in feces homo sapiens china )	2018-12-30	v4	1 / 238	approved	No
438	amnon	high in child age 3-6 age 8-12 2-5 year-old child stage 6-12 year-old child stage compared to adult 65-79 year-old human stage fourth decade human stage fifth decade human stage in feces homo sapiens china	2018-12-30	v4	1 / 279	approved	No
438	amnon	higher in centenarians compared to adults ( high in age >94 ninth decade human stage tenth decade human stage compared to 65-79 year-old human stage fourth decade human stage fifth decade human stage in feces homo sapiens china )	2018-12-30	v4	1 / 474	approved	No
438	amnon	high in adult 65-79 year-old human stage fourth decade human stage fifth decade human stage compared to child age 3-6 age 8-12 2-5 year-old child stage 6-12 year-old child stage in feces homo sapiens china	2018-12-30	v4	1 / 486	approved	No
438	amnon	lower in students and soldiers age 19-24 compared to older adults ( high in age >94 65-79 year-old human stage fourth decade human stage fifth decade human stage ninth decade human stage tenth decade human stage compared to soldiers young adult stage in feces homo sapiens china )	2018-12-30	v4	1 / 617	approved	No

Summary for ontology term: 65-79 year-old human stage

Top positive-associated sequence

Top negative-associated sequence

Top COMMON/DOMINANT/HIGH sequence

Annotations: