Summary for ontology term: age 35 days

Number of annotations with term: 14

Top positive-associated sequence

Taxonomy Sequence Recall

Top negative-associated sequence

Taxonomy Sequence Recall

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGGATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGGAGGAAGAAGGTTTTCGGATTGTAAACTCCTGTCGTTGGGGACGATTATGACGGTACCCAACAAGAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGTA0.666667
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGGATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGGAGGAAGAAGGTTTTCGGATTGTAAACTCCTGTCGTTAGGGACGAATCAAGACGGTACCTAACAAGAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGT0.608696
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGGATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGGAGGAAGAAGGTTTTCGGATTGTAAACTCCTGTCGTTGGGGACGAATCATGACGGTACCTAACAAGAAAGCACCGGCTAACTACGTGCCAGCAGCCGCGGT0.608696
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__BlautiaTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGAAGGAAGAAGTATCTCGGTATGTAAACTTCTATCAGCAGGGAAGAAAGTGACGGTACCTGACTAAGAAGCCCCGGCTAATTACGTGCCAGCAGCCGCGGTA0.480000
d__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__ErysipelotrichaceaeTAGGGAATTTTCGTCAATGGGGGGAACCCTGAACGAGCAATGCCGCGTGAGCGAAGAAGGTCTTCGGATCGTAAAGCTCTGTTGTAAGAGAAAAACGAGTGCCATAGGGAATGATGGCGCAGTGATGGTATCTTACCAGAAAGCCACGGC0.476190
d__BacteriaTGGGGGATATTGCACAATGGGCGAAAGCCTGATGCAGCAACGCCGCGTGAGGGAAGACGGCCTTCGGGTTGTAAACCTCTGTTCTAAGTGACGAAGAAGTGACGGTAGCTTAGGAGAAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGG0.476190
d__Bacteria;p__Firmicutes;c__Clostridia;o__ClostridialesTGGGGGATATTGCGCAATGGGGGAAACCCTGACGCAGCAACGCCGCGTGAAGGACGAAGGTTTTCGGATTGTAAACTTCTTTTGTCAGGGACGAAGAAATGACGGTACCTGACGAATAAGCTCCGGCTAACTACGTGCCAGCAGCCGCGG0.476190
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTGGGGAATATTGCACAATGGGGGGAAACCCTGATGCAGCGACGCCGCGTGAGCGAAGAAGTATCTCGGTATGTAAAGCTCTATCAGCAGGGAAGAAGAATGACGGTACCTGACTAAGAAGCTCCGGCTAAATACGTGCCAGCAGCCGCGG0.476190
d__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__ErysipelotrichaceaeTAGGGAATTTTCGTCAATGGGGGGAACCCTGAACGAGCAATGCCGCGTGAGCGAAGAAGGTCTTCGGATCGTAAAGCTCTGTTGTAAGAGAAAAACGGTCATCATAGGGAATGATGATGAAGTGATGGTATCTTACCAGAAAGCCACGGC0.476190
d__Bacteria;p__Firmicutes;c__Clostridia;o__ClostridialesTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCAACGCCGCGTGAAGGAAGAAGGTTTTCGGATCGTAAACTTCTATCAATAGGGACGAAACAAATGACGGTACCTAAATAAGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG0.476190

Annotations:

common ontology terms
term enrichment score
TermScore
age 35 days0.800000
cobb broiler chicken0.631579
lethbridge0.222222
LOWER IN cloaca0.200000
chicken0.181818
gallus gallus0.173913
cloaca0.148148
broiler chicken0.125000
LOWER IN ileum0.090909
ileum0.088889
LOWER IN caecum0.076923
caecum0.074534
canada0.057143
male0.044280
research facility0.022099
Fraction of dbbact annotations with this term covered by the query
TermScore
age 35 days0.666667
cobb broiler chicken0.500000
lethbridge0.500000
LOWER IN cloaca0.333333
broiler chicken0.111111
chicken0.100000
cloaca0.100000
gallus gallus0.095238
LOWER IN ileum0.066667
ileum0.052632
LOWER IN caecum0.052632
caecum0.040816
canada0.035714
male0.022727
research facility0.011173
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
gallus gallus1.000000
chicken1.000000
age 35 days1.000000
male0.857143
cobb broiler chicken0.857143
caecum0.428571
ileum0.285714
cloaca0.285714
LOWER IN caecum0.142857
LOWER IN ileum0.142857
LOWER IN cloaca0.142857
canada0.142857
broiler chicken0.142857
lethbridge0.142857
Number of experiments associating the term to the sequence
TermScore
research facility2.000000
caecum2.000000
gallus gallus2.000000
chicken2.000000
age 35 days2.000000
male1.000000
cobb broiler chicken1.000000
ileum1.000000
cloaca1.000000
LOWER IN caecum1.000000
LOWER IN ileum1.000000
LOWER IN cloaca1.000000
canada1.000000
broiler chicken1.000000
lethbridge1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
744amnondominant research facility, ileum, gallus gallus, male, chicken, cobb broiler chicken, age 35 days2021-02-21v31 / 9approvedNo
744amnondominant research facility, cloaca, gallus gallus, male, chicken, cobb broiler chicken, age 35 days2021-02-21v31 / 18approvedNo
744amnondominant research facility, caecum, gallus gallus, male, chicken, cobb broiler chicken, age 35 days2021-02-21v31 / 21approvedNo
756amnondominant research facility, caecum, gallus gallus, canada, chicken, broiler chicken, lethbridge, age 35 days2021-03-22v41 / 24approvedNo
744amnoncommon research facility, ileum, gallus gallus, male, chicken, cobb broiler chicken, age 35 days2021-02-21v31 / 38approvedNo
744amnon high in ileum compared to cloaca in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v31 / 47approvedNo
744amnon high in cloaca compared to caecum in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v31 / 70approvedNo
744amnoncommon research facility, cloaca, gallus gallus, male, chicken, cobb broiler chicken, age 35 days2021-02-21v31 / 114approvedNo
744amnon high in ileum compared to caecum in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v31 / 121approvedNo
744amnoncommon research facility, caecum, gallus gallus, male, chicken, cobb broiler chicken, age 35 days2021-02-21v31 / 141approvedNo
744amnon high in caecum compared to cloaca in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v31 / 187approvedNo
744amnon high in cloaca compared to ileum in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v31 / 265approvedNo
744amnon high in caecum compared to ileum in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v31 / 286approvedNo
756amnoncommon research facility, caecum, gallus gallus, canada, chicken, broiler chicken, lethbridge, age 35 days2021-03-22v41 / 321approvedNo

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