Summary for ontology term: american diet

Number of annotations with term: 6

Annotations:

common ontology terms

term enrichment score

Term	Score
american diet	0.666667
LOWER IN american diet	0.444444
humanized mouse	0.333333
LOWER IN bangladesh diet	0.250000
LOWER IN cron diet	0.250000
cron diet	0.250000
bangladesh diet	0.250000
LOWER IN caloric restriction diet	0.222222
caloric restriction diet	0.222222
diet	0.148148
mouse	0.038462
mus musculus	0.033898
adult	0.025478
research facility	0.020000
feces	0.019900
homo sapiens	0.012780
united states of america	0.010724

Fraction of dbbact annotations with this term covered by the query

Term	Score
american diet	0.666667
LOWER IN american diet	0.666667
LOWER IN bangladesh diet	0.500000
LOWER IN cron diet	0.500000
cron diet	0.500000
bangladesh diet	0.500000
humanized mouse	0.333333
LOWER IN caloric restriction diet	0.333333
caloric restriction diet	0.333333
diet	0.083333
mouse	0.020408
mus musculus	0.017857
adult	0.012987
research facility	0.010309
feces	0.010050
homo sapiens	0.006452
united states of america	0.005405

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
american diet	0.666667
diet	0.666667
homo sapiens	0.666667
adult	0.666667
united states of america	0.666667
mouse	0.333333
mus musculus	0.333333
humanized mouse	0.333333
research facility	0.333333
LOWER IN american diet	0.333333
LOWER IN bangladesh diet	0.166667
LOWER IN cron diet	0.166667
LOWER IN caloric restriction diet	0.166667
cron diet	0.166667
caloric restriction diet	0.166667
bangladesh diet	0.166667

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
210	amnon	higher in american diet compared to bangladeshi diet in mice with bangladeshi human FMT ( high in american diet diet compared to bangladesh diet in mouse mus musculus humanized mouse feces research facility )	2017-10-21	v4	No	1 / 4
210	amnon	higher in bangladeshi diet compared to american diet in mice with american human FMT ( high in bangladesh diet diet compared to american diet in feces research facility mus musculus mouse humanized mouse )	2017-10-21	v4	No	1 / 13
293	amnon	highfreq homo sapiens, feces, adult, united states of america, american diet	2018-02-07	v4	No	1 / 22
293	amnon	lower in caloric restriction (CRON) diet compared to american diet ( high in american diet diet compared to cron diet caloric restriction diet in homo sapiens adult feces united states of america )	2018-02-07	v4	No	1 / 61
293	amnon	common homo sapiens, feces, adult, united states of america, american diet	2018-02-07	v4	No	1 / 89
293	amnon	higher in caloric restriction (CRON) diet compared to american diet ( high in cron diet caloric restriction diet diet compared to american diet in homo sapiens adult feces united states of america )	2018-02-07	v4	No	1 / 381

Problems / suggestions? Please email info AT dbbact DOT org