Summary for ontology term: antibiotic

Number of annotations with term: 48

Annotations:

common ontology terms
term enrichment score
TermScore
antibiotic0.684211
LOWER IN antibiotic0.612529
mus musculoides0.250000
nyulmc0.250000
nod/shiltj (no. 001976, jackson labs)0.250000
neomycin0.214286
metronidazole0.210526
ampicillin0.184332
LOWER IN metronidazole0.181818
caecum0.166667
male0.160000
c57bl/6j0.153846
vancomycin0.148148
research facility0.143567
colon0.133333
rex rabbit0.133333
LOWER IN control0.128906
rattus norvegicus0.121212
mouse0.120674
control0.118189
sprague dawley0.117647
LOWER IN ampicillin0.115385
LOWER IN vancomycin0.115385
age 2 months0.111111
mus musculus0.109149
oryctolagus cuniculus0.105263
rat0.102564
belgium0.100000
sichuan province0.100000
israel0.085106
sus scrofa0.080000
pig0.080000
LOWER IN neomycin0.078431
state of louisiana0.076923
pulsed antibiotic treatment, macrolide tylosin tartrate0.076923
LOWER IN pulsed antibiotic treatment, macrolide tylosin tartrate0.076923
sub-therapeutic antibiotic treatment, penicillin v potassium salt0.076923
LOWER IN sub-therapeutic antibiotic treatment, penicillin v potassium salt0.076923
tylosin phosphate0.076923
LOWER IN tylosin phosphate0.076923
zebrafish0.076923
larvae0.076923
age 15d0.076923
canada0.074074
feces0.069606
danio rerio0.066667
switzerland0.064516
united states of america0.059197
cow0.058824
nasopharynx0.058824
state of california0.057143
fish0.052632
bos taurus0.051282
dog0.048780
canis lupus familiaris0.044444
LOWER IN cefoperazone0.040000
cefoperazone0.040000
LOWER IN ciprofloxacin0.040000
ciprofloxacin0.040000
LOWER IN clindamycin0.040000
clindamycin0.040000
LOWER IN streptomycin0.040000
streptomycin0.040000
LOWER IN doxycycline0.040000
LOWER IN amoxicillin0.040000
before antibiotics0.040000
ulcerative colitis0.040000
acute severe colitis0.040000
probiotic0.039216
female0.028986
child0.025000
homo sapiens0.015736
adult0.012987
Fraction of dbbact annotations with this term covered by the query
TermScore
antibiotic0.928571
LOWER IN antibiotic0.923077
ampicillin0.800000
LOWER IN ampicillin0.750000
LOWER IN vancomycin0.750000
neomycin0.750000
LOWER IN metronidazole0.714286
metronidazole0.666667
vancomycin0.666667
LOWER IN neomycin0.666667
state of louisiana0.500000
pulsed antibiotic treatment, macrolide tylosin tartrate0.500000
mus musculoides0.500000
nyulmc0.500000
nod/shiltj (no. 001976, jackson labs)0.500000
LOWER IN pulsed antibiotic treatment, macrolide tylosin tartrate0.500000
sub-therapeutic antibiotic treatment, penicillin v potassium salt0.500000
LOWER IN sub-therapeutic antibiotic treatment, penicillin v potassium salt0.500000
LOWER IN cefoperazone0.500000
cefoperazone0.500000
tylosin phosphate0.500000
LOWER IN tylosin phosphate0.500000
LOWER IN ciprofloxacin0.500000
ciprofloxacin0.500000
LOWER IN clindamycin0.500000
clindamycin0.500000
zebrafish0.500000
larvae0.500000
age 15d0.500000
LOWER IN streptomycin0.500000
streptomycin0.500000
LOWER IN doxycycline0.500000
LOWER IN amoxicillin0.500000
before antibiotics0.500000
ulcerative colitis0.500000
acute severe colitis0.500000
probiotic0.333333
canada0.333333
colon0.333333
rex rabbit0.333333
caecum0.250000
male0.222222
rattus norvegicus0.222222
c57bl/6j0.200000
sprague dawley0.200000
age 2 months0.166667
danio rerio0.166667
oryctolagus cuniculus0.142857
switzerland0.142857
israel0.133333
rat0.133333
belgium0.125000
sichuan province0.125000
cow0.100000
nasopharynx0.100000
research facility0.078740
sus scrofa0.076923
pig0.076923
LOWER IN control0.075000
mouse0.072727
fish0.071429
control0.068323
bos taurus0.066667
mus musculus0.064516
dog0.058824
canis lupus familiaris0.047619
state of california0.043478
feces0.036496
child0.031250
united states of america0.030973
female0.017544
homo sapiens0.008511
adult0.007042
Fraction of annotations for the query sequences containing the term
TermScore
research facility0.812500
feces0.750000
united states of america0.666667
antibiotic0.541667
LOWER IN control0.458333
LOWER IN antibiotic0.458333
control0.437500
mus musculus0.354167
mouse0.354167
mus musculoides0.166667
nyulmc0.166667
nod/shiltj (no. 001976, jackson labs)0.166667
metronidazole0.125000
c57bl/6j0.125000
male0.125000
caecum0.125000
neomycin0.125000
LOWER IN metronidazole0.104167
ampicillin0.104167
homo sapiens0.104167
female0.083333
colon0.083333
age 2 months0.083333
belgium0.083333
sus scrofa0.083333
pig0.083333
vancomycin0.083333
oryctolagus cuniculus0.083333
rex rabbit0.083333
sichuan province0.083333
state of california0.083333
adult0.083333
rat0.083333
rattus norvegicus0.083333
sprague dawley0.083333
LOWER IN ampicillin0.062500
israel0.062500
LOWER IN vancomycin0.062500
dog0.041667
canis lupus familiaris0.041667
state of louisiana0.041667
pulsed antibiotic treatment, macrolide tylosin tartrate0.041667
LOWER IN pulsed antibiotic treatment, macrolide tylosin tartrate0.041667
sub-therapeutic antibiotic treatment, penicillin v potassium salt0.041667
LOWER IN sub-therapeutic antibiotic treatment, penicillin v potassium salt0.041667
bos taurus0.041667
cow0.041667
nasopharynx0.041667
canada0.041667
tylosin phosphate0.041667
LOWER IN tylosin phosphate0.041667
fish0.041667
zebrafish0.041667
danio rerio0.041667
larvae0.041667
age 15d0.041667
LOWER IN neomycin0.041667
switzerland0.041667
probiotic0.020833
LOWER IN cefoperazone0.020833
cefoperazone0.020833
LOWER IN ciprofloxacin0.020833
ciprofloxacin0.020833
LOWER IN clindamycin0.020833
clindamycin0.020833
LOWER IN streptomycin0.020833
streptomycin0.020833
LOWER IN doxycycline0.020833
LOWER IN amoxicillin0.020833
before antibiotics0.020833
ulcerative colitis0.020833
acute severe colitis0.020833
child0.020833
Exp. ID User ID Description Date Region Flag Sequences
385amnoncolonize probiotic supplemented mice following antibiotics treatment ( high in probiotic compared to control in israel research facility mouse mus musculus feces antibiotic )2018-10-23v4No1 / -5
46amnonsmj: higher in female mice feces treated with antibiotics ( high in sub-therapeutic antibiotic treatment, penicillin v potassium salt antibiotic compared to control in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility female )2017-01-12v4No1 / -5
327amnonhigher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in bos taurus cow nasopharynx canada )2018-04-30v4No1 / -4
446amnonhigher in zebrafish larvae exposed to subclinical concentration of streptomycin compared to controls ( high in antibiotic streptomycin compared to control in fish zebrafish danio rerio research facility larvae age 15d united states of america )2019-01-08v4No1 / -4
399amnonhigher in clindamycin treated mice compared to controls ( high in clindamycin antibiotic compared to control in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / -3
399amnonhigher in metronidazole treated mice compared to controls ( high in antibiotic metronidazole compared to control in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / -3
399amnonhigher in vancomycin treated mice compared to controls ( high in antibiotic vancomycin compared to control in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / -3
25amnon high in antibiotic compared to control in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / -3
700amnon high in tylosin phosphate antibiotic compared to control in colon age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / -1
399amnonhigher in ampicillin treated mice compared to controls ( high in ampicillin antibiotic compared to control in feces united states of america research facility mus musculus mouse )2018-11-18v4No1 / 0
46amnonsmj: lower in female mice feces than treated with antibiotics ( high in control compared to sub-therapeutic antibiotic treatment, penicillin v potassium salt antibiotic in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility female )2017-01-12v4No1 / 2
700amnon high in tylosin phosphate antibiotic compared to control in colon age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 3
648amnon high in antibiotic metronidazole compared to control in united states of america dog canis lupus familiaris feces state of louisiana 2020-09-06v4No1 / 6
25amnon high in control compared to antibiotic in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 7
586amnoncommon rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, antibiotic, ampicillin, neomycin2020-02-09v4No1 / 7
46amnonsmj: higher in female mice feces treated with antibiotics ( high in antibiotic pulsed antibiotic treatment, macrolide tylosin tartrate compared to control in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility female )2017-01-12v4No1 / 8
659amnon high in before antibiotics compared to doxycycline metronidazole amoxicillin vancomycin antibiotic in ulcerative colitis acute severe colitis homo sapiens child feces 2020-09-19v4No1 / 8
586amnondominant rattus norvegicus, rat, sprague dawley, research facility, male, israel, feces, antibiotic, ampicillin, neomycin2020-02-09v4No1 / 8
683amnondominant during antibiotics treatment in feces (dominant metronidazole, vancomycin, neomycin, antibiotic, state of california, united states of america, adult, feces, homo sapiens)2028-03-04v4No1 / 9
46amnonsmj: higher in mice feces with antiobiotics ( high in sub-therapeutic antibiotic treatment, penicillin v potassium salt antibiotic compared to control in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility male )2017-01-12v4No1 / 12
446amnonlower in zebrafish larvae exposed to subclinical concentration of streptomycin compared to controls ( high in control compared to antibiotic streptomycin in fish zebrafish danio rerio research facility larvae age 15d united states of america )2019-01-08v4No1 / 17
46amnonsmj: lower in control mice feces than treated with antibiotics ( high in control compared to sub-therapeutic antibiotic treatment, penicillin v potassium salt antibiotic in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility male )2017-01-12v4No1 / 18
683amnoncommon during antibiotics treatment in feces (common metronidazole, vancomycin, neomycin, antibiotic, state of california, united states of america, adult, feces, homo sapiens)2028-03-04v4No1 / 18
700amnon high in control compared to antibiotic tylosin phosphate in colon age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 18
46amnonsmj: higher in mice feces treated with antibiotics ( high in pulsed antibiotic treatment, macrolide tylosin tartrate antibiotic compared to control in feces male mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility )2017-01-12v4No1 / 20
700amnon high in control compared to tylosin phosphate antibiotic in colon age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 33
321amnonhigher in mice treated with Metronidazole compared to untreated mice ( high in antibiotic metronidazole compared to control in mus musculus mouse c57bl/6j feces united states of america research facility )2018-04-22v4No1 / 36
327amnonlower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 37
441amnonhigher after antibiotic treatment ( high in antibiotic cefoperazone compared to control in mus musculus mouse c57bl/6j feces research facility united states of america )2019-01-06v4No1 / 42
321amnonhigher in mice treated with ampicillin compared to untreated mice ( high in ampicillin antibiotic compared to control in mus musculus mouse c57bl/6j feces united states of america research facility )2018-04-22v4No1 / 44
648amnon high in control compared to antibiotic metronidazole in united states of america dog canis lupus familiaris feces state of louisiana 2020-09-06v4No1 / 48
683amnonhigher in antibiotic treatment (combined 3 antibiotics) compared to pre-treatment ( high in metronidazole vancomycin neomycin antibiotic compared to control in state of california united states of america adult feces homo sapiens )2028-03-04v4No1 / 48
399amnonhigher in ciprofloxacin treated mice compared to controls ( high in ciprofloxacin antibiotic compared to control in feces united states of america research facility mus musculus mouse )2018-11-18v4No1 / 52
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic neomycin ampicillin compared to control in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 72
46amnonsmj: lower in control female mice than treated with antiobiotics ( high in control compared to antibiotic pulsed antibiotic treatment, macrolide tylosin tartrate in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility female )2017-01-12v4No1 / 86
399amnonlower in metronidazole treated mice compared to controls ( high in control compared to antibiotic metronidazole in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 119
46amnonsmj: lower in mice feces controls than antibiotics ( high in control compared to antibiotic pulsed antibiotic treatment, macrolide tylosin tartrate in feces male mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility )2017-01-12v4No1 / 126
399amnonlower in ciprofloxacin treated mice compared to controls ( high in control compared to ciprofloxacin antibiotic in feces united states of america research facility mus musculus mouse )2018-11-18v4No1 / 128
25amnon high in control compared to antibiotic in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 155
321amnonlower in mice treated with Metronidazole compared to untreated mice ( high in control compared to antibiotic metronidazole in mus musculus mouse c57bl/6j feces united states of america research facility )2018-04-22v4No1 / 185
399amnonlower in vancomycin treated mice compared to controls ( high in control compared to antibiotic vancomycin in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 217
25amnon high in antibiotic compared to control in oryctolagus cuniculus caecum rex rabbit sichuan province research facility 2016-12-01v4No1 / 223
434amnonlower in antibiotics treated rats compared to controls ( high in control compared to antibiotic neomycin ampicillin in rat rattus norvegicus sprague dawley feces caecum research facility switzerland )2018-12-20v4No1 / 230
321amnonlower in mice treated with ampicillin compared to untreated mice ( high in control compared to ampicillin antibiotic in mus musculus mouse c57bl/6j feces united states of america research facility )2018-04-22v4No1 / 247
399amnonlower in ampicillin treated mice compared to controls ( high in control compared to ampicillin antibiotic in feces united states of america research facility mus musculus mouse )2018-11-18v4No1 / 255
441amnonhigher before antibiotic treatment ( high in control compared to antibiotic cefoperazone in mus musculus mouse c57bl/6j feces research facility united states of america )2019-01-06v4No1 / 267
683amnonlower in antibiotic treatment (combined 3 antibiotics) compared to pre-treatment ( high in control compared to metronidazole neomycin vancomycin antibiotic in state of california united states of america adult feces homo sapiens )2028-03-04v4No1 / 294
399amnonlower in clindamycin treated mice compared to controls ( high in control compared to clindamycin antibiotic in feces united states of america research facility mouse mus musculus )2018-11-18v4No1 / 386

Problems / suggestions? Please email info AT dbbact DOT org