Summary for ontology term: atlanta

Number of annotations with term: 15

Annotations:

common ontology terms
term enrichment score
TermScore
atlanta0.800000
cheek0.400000
age<17 years0.347826
LOWER IN cheek0.210526
LOWER IN dentition0.200000
LOWER IN hiv infection0.160000
hiv infection0.148148
obsolete_juvenile stage0.145455
LOWER IN saliva0.142857
dentition0.106667
mouth0.093617
child0.091954
LOWER IN ulcerative colitis0.090909
ulcerative colitis0.090909
LOWER IN crohn's disease0.083333
crohn's disease0.083333
periodontitis0.083333
LOWER IN periodontitis0.083333
saliva0.061538
LOWER IN control0.031621
control0.031373
homo sapiens0.025478
united states of america0.021739
feces0.009963
Fraction of dbbact annotations with this term covered by the query
TermScore
atlanta0.666667
age<17 years0.500000
LOWER IN cheek0.500000
cheek0.500000
LOWER IN dentition0.200000
LOWER IN hiv infection0.200000
hiv infection0.166667
LOWER IN ulcerative colitis0.142857
ulcerative colitis0.142857
LOWER IN crohn's disease0.111111
crohn's disease0.111111
LOWER IN saliva0.111111
periodontitis0.111111
LOWER IN periodontitis0.111111
obsolete_juvenile stage0.100000
dentition0.066667
child0.055556
mouth0.050000
saliva0.040000
LOWER IN control0.016807
control0.016667
homo sapiens0.012903
united states of america0.010989
feces0.005076
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
united states of america1.000000
atlanta1.000000
mouth0.733333
cheek0.333333
feces0.266667
obsolete_juvenile stage0.266667
age<17 years0.266667
control0.266667
child0.266667
LOWER IN control0.266667
dentition0.266667
LOWER IN dentition0.200000
LOWER IN saliva0.200000
saliva0.133333
LOWER IN cheek0.133333
hiv infection0.133333
LOWER IN hiv infection0.133333
LOWER IN crohn's disease0.066667
LOWER IN ulcerative colitis0.066667
ulcerative colitis0.066667
crohn's disease0.066667
periodontitis0.066667
LOWER IN periodontitis0.066667
Exp. ID User ID Description Date Region Flag Sequences
102amnon high in hiv infection compared to control in homo sapiens mouth atlanta united states of america cheek 2017-04-04v4No1 / 2
102amnon high in hiv infection compared to control in homo sapiens mouth atlanta united states of america dentition 2017-04-04v4No1 / 4
102amnon high in control compared to periodontitis in homo sapiens mouth atlanta united states of america 2017-04-04v4No1 / 7
102amnon high in control compared to hiv infection in homo sapiens mouth atlanta united states of america cheek 2017-04-04v4No1 / 15
102amnon high in control compared to hiv infection in homo sapiens mouth atlanta united states of america dentition 2017-04-04v4No1 / 18
297amnon high in ulcerative colitis crohn's disease compared to control in homo sapiens feces obsolete_juvenile stage age<17 years united states of america atlanta child 2018-02-12v4No1 / 22
297amnonhighfreq homo sapiens, feces, obsolete_juvenile stage, age<17 years, united states of america, atlanta, child2018-02-12v4No1 / 22
102amnonlower in teeth compared to cheeks, saliva ( high in saliva cheek compared to dentition in homo sapiens mouth atlanta united states of america )2017-04-03v4No1 / 37
297amnon high in control compared to crohn's disease ulcerative colitis in homo sapiens feces obsolete_juvenile stage age<17 years united states of america atlanta child 2018-02-12v4No1 / 38
102amnonlower in saliva compared to teeth, cheek ( high in dentition cheek compared to saliva in homo sapiens mouth atlanta united states of america )2017-04-03v4No1 / 39
102amnonhigher in cheeks compared to teeth, saliva ( high in cheek compared to saliva dentition in homo sapiens mouth atlanta united states of america )2017-04-03v4No1 / 41
102amnon high in periodontitis compared to control in homo sapiens mouth atlanta united states of america 2017-04-04v4No1 / 53
102amnonhigher in teeth compared to cheeks, saliva ( high in dentition compared to saliva cheek in homo sapiens mouth atlanta united states of america )2017-04-03v4No1 / 63
102amnonhigher in saliva compared to teeth, cheek ( high in saliva compared to dentition cheek in homo sapiens mouth atlanta united states of america )2017-04-03v4No1 / 65
297amnoncommon homo sapiens, feces, obsolete_juvenile stage, age<17 years, united states of america, atlanta, child2018-02-12v4No1 / 162

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