Summary for ontology term: atlanta

Number of annotations with term: 15

Annotations:

common ontology terms
term enrichment score
TermScore
atlanta0.800000
cheek0.400000
age<17 years0.347826
LOWER IN cheek0.210526
obsolete_juvenile stage0.145455
LOWER IN dentition0.133333
LOWER IN hiv infection0.121212
hiv infection0.114286
LOWER IN saliva0.095238
LOWER IN ulcerative colitis0.086957
ulcerative colitis0.083333
LOWER IN periodontitis0.080000
LOWER IN crohn&#39;s disease0.076923
mouth0.075862
dentition0.074766
crohn's disease0.074074
periodontitis0.074074
child0.050314
saliva0.039604
LOWER IN control0.022535
control0.022284
united states of america0.016461
homo sapiens0.015209
feces0.006520
Fraction of dbbact annotations with this term covered by the query
TermScore
atlanta0.666667
age<17 years0.500000
LOWER IN cheek0.500000
cheek0.500000
LOWER IN ulcerative colitis0.125000
ulcerative colitis0.111111
LOWER IN hiv infection0.111111
obsolete_juvenile stage0.100000
LOWER IN dentition0.100000
hiv infection0.100000
LOWER IN periodontitis0.100000
LOWER IN crohn&#39;s disease0.090909
crohn's disease0.083333
periodontitis0.083333
LOWER IN saliva0.062500
dentition0.043478
mouth0.040000
child0.027778
saliva0.023256
LOWER IN control0.011765
control0.011628
united states of america0.008299
homo sapiens0.007663
feces0.003300
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
united states of america1.000000
atlanta1.000000
mouth0.733333
cheek0.333333
feces0.266667
obsolete_juvenile stage0.266667
age<17 years0.266667
control0.266667
child0.266667
LOWER IN control0.266667
dentition0.266667
LOWER IN dentition0.200000
LOWER IN saliva0.200000
saliva0.133333
LOWER IN cheek0.133333
hiv infection0.133333
LOWER IN hiv infection0.133333
LOWER IN crohn&#39;s disease0.066667
LOWER IN ulcerative colitis0.066667
crohn's disease0.066667
ulcerative colitis0.066667
periodontitis0.066667
LOWER IN periodontitis0.066667
Exp. ID User ID Description Date Region Flag Sequences
102amnon high in hiv infection compared to control in homo sapiens atlanta united states of america cheek mouth 2017-04-04v4No1 / 2
102amnon high in hiv infection compared to control in homo sapiens atlanta united states of america dentition mouth 2017-04-04v4No1 / 4
102amnon high in control compared to periodontitis in homo sapiens atlanta united states of america mouth 2017-04-04v4No1 / 7
102amnon high in control compared to hiv infection in homo sapiens atlanta united states of america cheek mouth 2017-04-04v4No1 / 15
102amnon high in control compared to hiv infection in homo sapiens atlanta united states of america dentition mouth 2017-04-04v4No1 / 18
297amnon high in crohn's disease ulcerative colitis compared to control in homo sapiens feces obsolete_juvenile stage age<17 years united states of america atlanta child 2018-02-12v4No1 / 22
297amnondominant homo sapiens, feces, obsolete_juvenile stage, age<17 years, united states of america, atlanta, child2018-02-12v4No1 / 22
102amnonlower in teeth compared to cheeks, saliva ( high in saliva cheek compared to dentition in homo sapiens atlanta united states of america mouth )2017-04-03v4No1 / 37
297amnon high in control compared to crohn's disease ulcerative colitis in homo sapiens feces obsolete_juvenile stage age<17 years united states of america atlanta child 2018-02-12v4No1 / 38
102amnonlower in saliva compared to teeth, cheek ( high in dentition cheek compared to saliva in homo sapiens atlanta united states of america mouth )2017-04-03v4No1 / 39
102amnonhigher in cheeks compared to teeth, saliva ( high in cheek compared to saliva dentition in homo sapiens atlanta united states of america mouth )2017-04-03v4No1 / 41
102amnon high in periodontitis compared to control in homo sapiens atlanta united states of america mouth 2017-04-04v4No1 / 53
102amnonhigher in teeth compared to cheeks, saliva ( high in dentition compared to saliva cheek in homo sapiens atlanta united states of america mouth )2017-04-03v4No1 / 63
102amnonhigher in saliva compared to teeth, cheek ( high in saliva compared to dentition cheek in homo sapiens atlanta united states of america mouth )2017-04-03v4No1 / 65
297amnoncommon homo sapiens, feces, obsolete_juvenile stage, age<17 years, united states of america, atlanta, child2018-02-12v4No1 / 162

Problems / suggestions? Please email info AT dbbact DOT org