Summary for ontology term: atlantic ocean

Number of annotations with term: 91

Annotations:

common ontology terms
term enrichment score
TermScore
atlantic ocean0.585162
bos taurus0.481283
cow0.444902
ireland0.270270
south florida0.235294
state of georgia0.198347
shark0.194690
farm0.193237
rumen0.193159
sea water0.192513
holstein-friesian bull0.149533
surface water0.132353
late timepoints0.121212
canada0.120000
ocean0.119701
portuguese republic0.116505
saline marsh0.116505
coastal water0.116505
spartina alterniflora0.110092
depth 20m0.104348
commonwealth of massachusetts0.099174
30-60 days0.099010
state of florida0.093023
sediment0.085561
north america0.080808
age 42 days0.080808
liverpool0.080808
great britain0.080808
chitin beads0.080808
age 100 days0.080808
angus steer0.080808
pasture0.077670
post-weaning0.077670
diet0.076336
water0.076125
lamb0.074766
state of nebraska0.074766
united states of america0.069316
chicken0.065041
gallus gallus0.065041
sheep0.065041
pacific ocean0.062992
eunicella labiata0.061856
gorgonian coral0.061856
skin0.061162
ovis aries0.061069
nasopharynx0.061069
marine water body0.060000
coral reef0.060000
gill0.058252
coral0.056604
caecum0.056604
saline water0.049587
depth 25cm0.042105
LOWER IN atlantic ocean0.042105
LOWER IN pacific ocean0.042105
trichodesmium0.042105
sargasso sea0.042105
respiratory airway0.042105
exhaled air condensate0.042105
whale blow0.042105
depth 0cm0.042105
anal canal0.042105
biofilm0.042105
depth 200-2000 m0.042105
beach0.042105
santa cruz county0.042105
megaptera novaeangliae0.041237
humpback whale0.041237
depth 1000m0.041237
sediment depth 0-5cm0.041237
debris0.041237
child0.041026
LOWER IN early timepoints0.040816
rhizosphere0.040678
dentition0.040541
ph 6-70.040404
early timepoints0.040000
LOWER IN late timepoints0.040000
LOWER IN sea water0.040000
commonwealth of pennsylvania0.038095
italy0.034188
marine sediment0.033058
age0.030075
state of california0.029630
feces0.028907
soil0.022792
0-2 days0.021505
LOWER IN 30-60 days0.021505
LOWER IN 0-2 days0.021505
unshaded0.021505
sunlight0.021505
LOWER IN shaded0.021505
shaded0.021505
LOWER IN unshaded0.021505
LOWER IN sunlight0.021505
LOWER IN cape cod canal0.021505
cape cod canal0.021505
LOWER IN vancouver0.021505
LOWER IN marine water body0.021505
Fraction of dbbact annotations with this term covered by the query
TermScore
cow0.888889
atlantic ocean0.875000
ireland0.750000
canada0.666667
bos taurus0.642857
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
north america0.500000
depth 25cm0.500000
LOWER IN atlantic ocean0.500000
LOWER IN cape cod canal0.500000
cape cod canal0.500000
LOWER IN vancouver0.500000
LOWER IN pacific ocean0.500000
trichodesmium0.500000
sargasso sea0.500000
respiratory airway0.500000
exhaled air condensate0.500000
whale blow0.500000
south florida0.500000
shark0.500000
portuguese republic0.500000
eunicella labiata0.500000
gorgonian coral0.500000
LOWER IN marine water body0.500000
LOWER IN coral reef0.500000
LOWER IN coral0.500000
LOWER IN eunicella labiata0.500000
LOWER IN gorgonian coral0.500000
age 42 days0.500000
liverpool0.500000
great britain0.500000
LOWER IN caecum0.500000
saline marsh0.500000
LOWER IN new zealand0.500000
LOWER IN ireland0.500000
depth 0cm0.500000
anal canal0.500000
biofilm0.500000
depth 200-2000 m0.500000
LOWER IN shark0.500000
coastal water0.500000
chitin beads0.500000
middle timepoints0.500000
age 100 days0.500000
linseed oil food product0.500000
LOWER IN linseed oil food product0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
angus steer0.500000
LOWER IN days 14-280.500000
days 14-280.500000
LOWER IN days 1-20.500000
beach0.500000
santa cruz county0.500000
state of georgia0.400000
megaptera novaeangliae0.333333
humpback whale0.333333
marine water body0.333333
coral reef0.333333
spartina alterniflora0.333333
low salinity0.333333
LOWER IN high salinity0.333333
high salinity0.333333
LOWER IN low salinity0.333333
pasture0.333333
depth 1000m0.333333
sediment depth 0-5cm0.333333
debris0.333333
LOWER IN gill0.333333
depth 0m0.333333
post-weaning0.333333
days 1-20.333333
late timepoints0.285714
LOWER IN early timepoints0.285714
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.505495
atlantic ocean0.439560
bos taurus0.384615
cow0.296703
farm0.219780
sea water0.197802
feces0.175824
rumen0.175824
ireland0.164835
south florida0.153846
state of florida0.153846
state of georgia0.131868
shark0.120879
water0.120879
surface water0.098901
ocean0.087912
sediment0.087912
holstein-friesian bull0.087912
late timepoints0.076923
canada0.065934
depth 20m0.065934
portuguese republic0.065934
rhizosphere0.065934
saline marsh0.065934
spartina alterniflora0.065934
coastal water0.065934
commonwealth of massachusetts0.065934
30-60 days0.054945
skin0.054945
diet0.054945
north america0.043956
pacific ocean0.043956
age 42 days0.043956
research facility0.043956
liverpool0.043956
great britain0.043956
chicken0.043956
gallus gallus0.043956
soil0.043956
pasture0.043956
chitin beads0.043956
ovis aries0.043956
sheep0.043956
lamb0.043956
child0.043956
age 100 days0.043956
nasopharynx0.043956
state of nebraska0.043956
post-weaning0.043956
angus steer0.043956
saline water0.032967
marine water body0.032967
eunicella labiata0.032967
gorgonian coral0.032967
coral0.032967
coral reef0.032967
caecum0.032967
dentition0.032967
gill0.032967
early timepoints0.021978
LOWER IN late timepoints0.021978
LOWER IN early timepoints0.021978
commonwealth of pennsylvania0.021978
depth 25cm0.021978
LOWER IN atlantic ocean0.021978
LOWER IN pacific ocean0.021978
trichodesmium0.021978
sargasso sea0.021978
megaptera novaeangliae0.021978
humpback whale0.021978
respiratory airway0.021978
exhaled air condensate0.021978
whale blow0.021978
LOWER IN sea water0.021978
ph 6-70.021978
depth 0cm0.021978
anal canal0.021978
depth 1000m0.021978
sediment depth 0-5cm0.021978
marine sediment0.021978
biofilm0.021978
debris0.021978
depth 200-2000 m0.021978
italy0.021978
control0.021978
LOWER IN control0.021978
age0.021978
state of california0.021978
beach0.021978
santa cruz county0.021978
0-2 days0.010989
LOWER IN 30-60 days0.010989
LOWER IN 0-2 days0.010989
unshaded0.010989
sunlight0.010989
LOWER IN shaded0.010989
shaded0.010989
LOWER IN unshaded0.010989
LOWER IN sunlight0.010989
vancouver0.010989
Exp. ID User ID Description Date Region Flag Sequences
491amnonlower in lambs fed linseed oil supplemented diet compared to control diet ( high in control diet compared to linseed oil food product in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 0
525amnoncow mitochondrial dna (other bos taurus, mitochondrion, cow)2019-07-10v4No1 / 0
491amnonhigher in lambs fed linseed oil supplemented diet compared to control diet ( high in diet linseed oil food product compared to control diet in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 3
327amnonhigher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 3
545amnondominant atlantic ocean, ocean, biofilm, debris, depth 200-2000 m2019-08-04v4No1 / 4
592amnondominant feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 5
666amnondominant cow, bos taurus, italy, feces2020-09-25v3No1 / 5
545amnondominant sediment, sediment depth 0-5cm, depth 1000m, ocean, atlantic ocean, marine sediment2019-08-04v4No1 / 6
376amnondominant rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora2018-09-11v4No1 / 7
480amnondominant soil, pasture, farm, ireland2019-02-05v4No1 / 7
518amnondominant bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 7
466amnondominant feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 8
136amnondominant sea water, trichodesmium, ocean, sargasso sea, atlantic ocean2017-04-17v4No1 / 10
565amnondominant skin, canada, farm, bos taurus, cow2019-11-21v3No1 / 11
323amnondominant water, atlantic ocean, south florida, state of florida, united states of america, surface water, depth 0cm, sea water2018-04-24v4No1 / 11
323amnonhigh freq. in shark cloaca (dominant atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v4No1 / 11
323amnonhigh freq. in shark skin (dominant atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v4No1 / 12
461amnondominant water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, sea water2019-01-12v4No1 / 12
280amnondominant atlantic ocean, depth 20m, portuguese republic, eunicella labiata, gorgonian coral, coral, coral reef2018-01-25v4No1 / 13
622amnondominant caecum, age 42 days, research facility, liverpool, great britain, chicken, gallus gallus2020-05-08v4No1 / 13
323amnonhigh freq. in shark gills (dominant atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v4No1 / 14
327amnondominant bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 14
491amnondominant ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 15
83amnondominant bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 15
304amnondominant united states of america, state of california, beach, pacific ocean, water, sea water, santa cruz county2018-03-12v4No1 / 15
466amnonhigh freq. in cow feces left in field for 30-60 days (dominant feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 17
280amnon high in eunicella labiata coral reef gorgonian coral coral compared to saline water sea water marine water body in atlantic ocean depth 20m portuguese republic 2018-01-25v4No1 / 18
323amnonhigh freq. in shark teeth (dominant atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v4No1 / 18
261amnondominant bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 18
480amnon high in new zealand compared to ireland in soil pasture farm ph 6-7 2019-02-05v4No1 / 19
280amnondominant atlantic ocean, saline water, sea water, marine water body, depth 20m, portuguese republic2018-01-25v4No1 / 20
323amnonhigher in teeth compared to skin and gills in sharks ( high in dentition compared to skin gill in atlantic ocean south florida state of florida united states of america shark )2018-04-24v4No1 / 24
622amnon high in ileum compared to caecum in age 42 days research facility liverpool great britain chicken gallus gallus 2020-05-08v4No1 / 28
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 39
327amnonlower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 44
327amnoncommon bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 49
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 66
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 79
136amnoncommon sea water, trichodesmium, ocean, sargasso sea, atlantic ocean2017-04-17v4No1 / 80
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 82
209amnon high in atlantic ocean compared to pacific ocean in north america megaptera novaeangliae humpback whale respiratory airway exhaled air condensate whale blow 2017-10-15v4No1 / 85
480amnon high in ireland compared to new zealand in soil pasture farm ph 6-7 2019-02-05v4No1 / 93
323amnonlower in teeth compared to skin and gills in sharks ( high in gill skin compared to dentition in atlantic ocean south florida state of florida united states of america shark )2018-04-24v4No1 / 97
491amnoncommon ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 104
323amnonhigher in sharks compared to sea water ( high in shark compared to water surface water depth 0m sea water in atlantic ocean south florida state of florida united states of america )2018-04-24v4No1 / 106
461amnonearly colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, middle timepoints, sea water)2019-01-12v4No1 / 107
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 111
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 112
461amnonlate colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, late timepoints, sea water)2019-01-12v4No1 / 119
323amnoncommon freq. in shark teeth (common atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v4No1 / 122
280amnoncommon atlantic ocean, depth 20m, portuguese republic, eunicella labiata, gorgonian coral, coral, coral reef2018-01-25v4No1 / 127
280amnon high in marine water body sea water saline water compared to coral reef coral eunicella labiata gorgonian coral in atlantic ocean depth 20m portuguese republic 2018-01-25v4No1 / 131
461amnonlower in early compared to late timepoints in chitin beads incubated in ocean water ( high in late timepoints compared to early timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 140
209amnon high in pacific ocean vancouver compared to atlantic ocean cape cod canal in sea water ocean north america depth 25cm 2017-10-15v4No1 / 143
461amnonhigher in early compared to late timepoints in chitin beads incubated in ocean water ( high in early timepoints compared to late timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 159
376amnoncommon rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora2018-09-11v4No1 / 160
376amnonappear when transferred from high salinity to low salinity (other rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora)2018-09-11v4No1 / 160
209amnon high in cape cod canal atlantic ocean compared to vancouver pacific ocean in sea water ocean north america depth 25cm 2017-10-15v4No1 / 165
323amnoncommon in shark cloaca (common atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v4No1 / 166
323amnoncommon in shark gills (common atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v4No1 / 169
323amnoncommon in shark skin (common atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v4No1 / 212
209amnon high in pacific ocean compared to atlantic ocean in north america megaptera novaeangliae humpback whale respiratory airway exhaled air condensate whale blow 2017-10-15v4No1 / 218
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 220
545amnoncommon atlantic ocean, ocean, biofilm, debris, depth 200-2000 m2019-08-04v4No1 / 226
622amnoncommon caecum, age 42 days, research facility, liverpool, great britain, chicken, gallus gallus2020-05-08v4No1 / 243
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 247
280amnoncommon atlantic ocean, saline water, sea water, marine water body, depth 20m, portuguese republic2018-01-25v4No1 / 258
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 265
622amnon high in caecum compared to ileum in age 42 days research facility liverpool great britain chicken gallus gallus 2020-05-08v4No1 / 306
565amnoncommon skin, canada, farm, bos taurus, cow2019-11-21v3No1 / 317
461amnoncommon water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, sea water2019-01-12v4No1 / 321
518amnonhigher in beginning of experiment ( high in days 1-2 compared to days 14-28 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 324
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 431
545amnoncommon atlantic ocean, ocean, depth 1000m, sediment depth 0-5cm, sediment, marine sediment2019-08-04v4No1 / 435
666amnoncommon cow, bos taurus, italy, feces2020-09-25v3No1 / 482
376amnondisappear when transferred from high salinity to low salinity (other rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora)2018-09-11v4No1 / 493
518amnoncommon bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 497
323amnoncommon water, atlantic ocean, south florida, state of florida, united states of america, surface water, depth 0cm, sea water2018-04-24v4No1 / 503
376amnonlower in salt marsh with low salinity (11) compared to higher salinity (25-30) ( high in high salinity compared to low salinity in rhizosphere saline marsh united states of america atlantic ocean sediment spartina alterniflora )2018-09-11v4No1 / 532
518amnonhigher in end of experiment (older steers) ( high in days 14-28 compared to days 1-2 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 608
592amnoncommon feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 632
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 661
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 756
466amnoncommon feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 782
480amnoncommon soil, pasture, farm, ireland2019-02-05v4No1 / 815
323amnonlower in sharks compared to sea water ( high in water surface water depth 0m sea water compared to shark in atlantic ocean south florida state of florida united states of america )2018-04-24v4No1 / 978
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1022
376amnonhigher in salt marsh with low salinity (11) compared to higher salinity (25-30) ( high in low salinity compared to high salinity in rhizosphere saline marsh united states of america atlantic ocean sediment spartina alterniflora )2018-09-11v4No1 / 1037
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1328
304amnoncommon united states of america, state of california, beach, pacific ocean, water, sea water, santa cruz county2018-03-12v4No1 / 1424
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1734

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