Summary for ontology term: atlantic ocean

Number of annotations with term: 97

Annotations:

common ontology terms
term enrichment score
TermScore
atlantic ocean0.591574
bos taurus0.485246
cow0.448839
ireland0.256410
south florida0.224000
rumen0.213018
sea water0.206034
farm0.187793
shark0.184874
state of georgia0.180451
holstein-friesian bull0.141593
surface water0.122867
late timepoints0.115226
ocean0.114558
canada0.113208
portuguese republic0.110092
saline marsh0.110092
coastal water0.110092
spartina alterniflora0.104348
depth 20m0.099174
commonwealth of massachusetts0.094488
30-60 days0.093458
state of florida0.091205
sediment0.081218
saline water0.080321
north america0.076190
age 42 days0.076190
liverpool0.076190
great britain0.076190
chitin beads0.076190
age 100 days0.076190
angus steer0.076190
united states of america0.074130
water0.073661
pasture0.073394
post-weaning0.073394
diet0.072993
lamb0.070796
state of nebraska0.070796
chicken0.062016
gallus gallus0.062016
pacific ocean0.060150
LOWER IN atlantic ocean0.059113
sheep0.058394
nasopharynx0.058394
eunicella labiata0.058252
gorgonian coral0.058252
skin0.058140
rumen liquid0.057416
marine water body0.056604
coral reef0.056604
ovis aries0.055172
gill0.055046
coral0.053571
caecum0.052174
italy0.050209
depth 25cm0.039604
LOWER IN pacific ocean0.039604
trichodesmium0.039604
sargasso sea0.039604
state of south carolina0.039604
florida0.039604
respiratory airway0.039604
exhaled air condensate0.039604
whale blow0.039604
depth 0cm0.039604
anal canal0.039604
biofilm0.039604
depth 200-2000 m0.039604
clavelina oblonga0.039604
sea squirts0.039604
harbor0.039604
inner tunic0.039604
beach0.039604
santa cruz county0.039604
rhizosphere0.039088
megaptera novaeangliae0.038835
humpback whale0.038835
depth 1000m0.038835
sediment depth 0-5cm0.038835
debris0.038835
municipality of beijing0.038835
age 2 years0.038835
LOWER IN early timepoints0.038462
early timepoints0.037736
LOWER IN late timepoints0.037736
dentition0.037500
state of north carolina0.037383
LOWER IN sea water0.037383
ph 6-70.037383
male organism0.036697
child0.036199
commonwealth of pennsylvania0.036036
male0.034783
marine sediment0.031008
age0.028777
state of california0.027972
feces0.027188
research facility0.025751
soil0.022161
Fraction of dbbact annotations with this term covered by the query
TermScore
cow0.900000
atlantic ocean0.888889
ireland0.750000
bos taurus0.666667
LOWER IN atlantic ocean0.666667
canada0.666667
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
north america0.500000
depth 25cm0.500000
LOWER IN cape cod canal0.500000
cape cod canal0.500000
LOWER IN vancouver0.500000
LOWER IN pacific ocean0.500000
trichodesmium0.500000
sargasso sea0.500000
state of south carolina0.500000
florida0.500000
respiratory airway0.500000
exhaled air condensate0.500000
whale blow0.500000
south florida0.500000
shark0.500000
portuguese republic0.500000
eunicella labiata0.500000
gorgonian coral0.500000
LOWER IN marine water body0.500000
LOWER IN coral reef0.500000
LOWER IN coral0.500000
LOWER IN eunicella labiata0.500000
LOWER IN gorgonian coral0.500000
age 42 days0.500000
liverpool0.500000
great britain0.500000
saline marsh0.500000
LOWER IN new zealand0.500000
LOWER IN ireland0.500000
depth 0cm0.500000
anal canal0.500000
biofilm0.500000
depth 200-2000 m0.500000
LOWER IN shark0.500000
coastal water0.500000
chitin beads0.500000
middle timepoints0.500000
age 100 days0.500000
linseed oil food product0.500000
LOWER IN linseed oil food product0.500000
holstein-friesian bull0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
clavelina oblonga0.500000
sea squirts0.500000
harbor0.500000
inner tunic0.500000
LOWER IN brazil0.500000
LOWER IN mediterranean sea0.500000
LOWER IN italy0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
angus steer0.500000
LOWER IN days 14-280.500000
days 14-280.500000
LOWER IN days 1-20.500000
beach0.500000
santa cruz county0.500000
rumen liquid0.400000
state of georgia0.333333
megaptera novaeangliae0.333333
humpback whale0.333333
marine water body0.333333
coral reef0.333333
LOWER IN caecum0.333333
spartina alterniflora0.333333
low salinity0.333333
LOWER IN high salinity0.333333
high salinity0.333333
LOWER IN low salinity0.333333
pasture0.333333
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.505155
atlantic ocean0.443299
bos taurus0.381443
cow0.298969
farm0.206186
sea water0.206186
rumen0.185567
feces0.164948
ireland0.154639
south florida0.144330
state of florida0.144330
state of georgia0.123711
shark0.113402
water0.113402
surface water0.092784
ocean0.082474
sediment0.082474
holstein-friesian bull0.082474
late timepoints0.072165
canada0.061856
depth 20m0.061856
portuguese republic0.061856
research facility0.061856
rhizosphere0.061856
saline marsh0.061856
spartina alterniflora0.061856
coastal water0.061856
commonwealth of massachusetts0.061856
30-60 days0.051546
saline water0.051546
skin0.051546
diet0.051546
north america0.041237
pacific ocean0.041237
age 42 days0.041237
liverpool0.041237
great britain0.041237
chicken0.041237
gallus gallus0.041237
soil0.041237
pasture0.041237
chitin beads0.041237
ovis aries0.041237
sheep0.041237
lamb0.041237
child0.041237
age 100 days0.041237
nasopharynx0.041237
state of nebraska0.041237
post-weaning0.041237
angus steer0.041237
LOWER IN atlantic ocean0.030928
marine water body0.030928
eunicella labiata0.030928
gorgonian coral0.030928
coral0.030928
coral reef0.030928
caecum0.030928
dentition0.030928
gill0.030928
italy0.030928
rumen liquid0.030928
early timepoints0.020619
LOWER IN late timepoints0.020619
LOWER IN early timepoints0.020619
commonwealth of pennsylvania0.020619
depth 25cm0.020619
LOWER IN pacific ocean0.020619
trichodesmium0.020619
sargasso sea0.020619
state of north carolina0.020619
state of south carolina0.020619
florida0.020619
megaptera novaeangliae0.020619
humpback whale0.020619
respiratory airway0.020619
exhaled air condensate0.020619
whale blow0.020619
LOWER IN sea water0.020619
ph 6-70.020619
depth 0cm0.020619
anal canal0.020619
depth 1000m0.020619
sediment depth 0-5cm0.020619
marine sediment0.020619
biofilm0.020619
debris0.020619
depth 200-2000 m0.020619
control0.020619
LOWER IN control0.020619
age0.020619
clavelina oblonga0.020619
sea squirts0.020619
harbor0.020619
inner tunic0.020619
municipality of beijing0.020619
china0.020619
male0.020619
male organism0.020619
age 2 years0.020619
Exp. ID User ID Description Date Region Flag Sequences
491amnonlower in lambs fed linseed oil supplemented diet compared to control diet ( high in control diet compared to linseed oil food product in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / -7
525amnoncow mitochondrial dna (other bos taurus, mitochondrion, cow)2019-07-10v4No1 / -7
491amnonhigher in lambs fed linseed oil supplemented diet compared to control diet ( high in diet linseed oil food product compared to control diet in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / -4
327amnonhigher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in bos taurus cow nasopharynx canada )2018-04-30v4No1 / -4
545amnondominant atlantic ocean, ocean, biofilm, debris, depth 200-2000 m2019-08-04v4No1 / -3
592amnondominant feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / -2
666amnondominant cow, bos taurus, italy, feces2020-09-25v3No1 / -2
545amnondominant sediment, sediment depth 0-5cm, depth 1000m, ocean, atlantic ocean, marine sediment2019-08-04v4No1 / -1
376amnondominant rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora2018-09-11v4No1 / 0
480amnondominant soil, pasture, farm, ireland2019-02-05v4No1 / 0
518amnondominant bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 0
466amnondominant feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 1
701amnondominant municipality of beijing, research facility, china, male, male organism, age 2 years, rumen liquid, rumen, bos taurus, cow2028-04-01v3No1 / 1
136amnondominant sea water, trichodesmium, ocean, sargasso sea, atlantic ocean2017-04-17v4No1 / 3
565amnondominant skin, canada, farm, bos taurus, cow2019-11-21v3No1 / 4
323amnondominant water, atlantic ocean, south florida, state of florida, united states of america, surface water, depth 0cm, sea water2018-04-24v4No1 / 4
323amnonhigh freq. in shark cloaca (dominant atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v4No1 / 4
699amnondominant united states of america, state of north carolina, state of south carolina, florida, atlantic ocean, saline water, sea water2028-04-01v4No1 / 5
323amnonhigh freq. in shark skin (dominant atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v4No1 / 5
461amnondominant water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, sea water2019-01-12v4No1 / 5
280amnondominant atlantic ocean, depth 20m, portuguese republic, eunicella labiata, gorgonian coral, coral, coral reef2018-01-25v4No1 / 6
622amnondominant caecum, age 42 days, research facility, liverpool, great britain, chicken, gallus gallus2020-05-08v4No1 / 6
323amnonhigh freq. in shark gills (dominant atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v4No1 / 7
327amnondominant bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 7
491amnondominant ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 8
83amnondominant bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 8
304amnondominant united states of america, state of california, beach, pacific ocean, water, sea water, santa cruz county2018-03-12v4No1 / 8
466amnonhigh freq. in cow feces left in field for 30-60 days (dominant feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 10
280amnon high in eunicella labiata coral reef gorgonian coral coral compared to saline water sea water marine water body in atlantic ocean depth 20m portuguese republic 2018-01-25v4No1 / 11
323amnonhigh freq. in shark teeth (dominant atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v4No1 / 11
261amnondominant bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 11
480amnon high in new zealand compared to ireland in soil pasture farm ph 6-7 2019-02-05v4No1 / 12
280amnondominant atlantic ocean, saline water, sea water, marine water body, depth 20m, portuguese republic2018-01-25v4No1 / 13
323amnonhigher in teeth compared to skin and gills in sharks ( high in dentition compared to skin gill in atlantic ocean south florida state of florida united states of america shark )2018-04-24v4No1 / 17
622amnon high in ileum compared to caecum in age 42 days research facility liverpool great britain chicken gallus gallus 2020-05-08v4No1 / 21
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 32
327amnonlower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 37
327amnoncommon bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 42
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 59
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 72
136amnoncommon sea water, trichodesmium, ocean, sargasso sea, atlantic ocean2017-04-17v4No1 / 73
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 75
209amnon high in atlantic ocean compared to pacific ocean in north america megaptera novaeangliae humpback whale respiratory airway exhaled air condensate whale blow 2017-10-15v4No1 / 78
480amnon high in ireland compared to new zealand in soil pasture farm ph 6-7 2019-02-05v4No1 / 86
323amnonlower in teeth compared to skin and gills in sharks ( high in gill skin compared to dentition in atlantic ocean south florida state of florida united states of america shark )2018-04-24v4No1 / 90
491amnoncommon ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 97
323amnonhigher in sharks compared to sea water ( high in shark compared to water surface water depth 0m sea water in atlantic ocean south florida state of florida united states of america )2018-04-24v4No1 / 99
461amnonearly colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, middle timepoints, sea water)2019-01-12v4No1 / 100
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 104
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 105
461amnonlate colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, late timepoints, sea water)2019-01-12v4No1 / 112
323amnoncommon freq. in shark teeth (common atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v4No1 / 115
280amnoncommon atlantic ocean, depth 20m, portuguese republic, eunicella labiata, gorgonian coral, coral, coral reef2018-01-25v4No1 / 120
280amnon high in marine water body sea water saline water compared to coral reef coral eunicella labiata gorgonian coral in atlantic ocean depth 20m portuguese republic 2018-01-25v4No1 / 124
461amnonlower in early compared to late timepoints in chitin beads incubated in ocean water ( high in late timepoints compared to early timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 133
209amnon high in pacific ocean vancouver compared to atlantic ocean cape cod canal in sea water ocean north america depth 25cm 2017-10-15v4No1 / 136
461amnonhigher in early compared to late timepoints in chitin beads incubated in ocean water ( high in early timepoints compared to late timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 152
376amnoncommon rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora2018-09-11v4No1 / 153
376amnonappear when transferred from high salinity to low salinity (other rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora)2018-09-11v4No1 / 153
209amnon high in cape cod canal atlantic ocean compared to vancouver pacific ocean in sea water ocean north america depth 25cm 2017-10-15v4No1 / 158
323amnoncommon in shark cloaca (common atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v4No1 / 159
323amnoncommon in shark gills (common atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v4No1 / 162
323amnoncommon in shark skin (common atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v4No1 / 205
699amnon high in mediterranean sea italy kingdom of spain compared to brazil united states of america atlantic ocean in clavelina oblonga sea squirts harbor inner tunic 2028-04-01v4No1 / 209
209amnon high in pacific ocean compared to atlantic ocean in north america megaptera novaeangliae humpback whale respiratory airway exhaled air condensate whale blow 2017-10-15v4No1 / 211
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 213
545amnoncommon atlantic ocean, ocean, biofilm, debris, depth 200-2000 m2019-08-04v4No1 / 219
622amnoncommon caecum, age 42 days, research facility, liverpool, great britain, chicken, gallus gallus2020-05-08v4No1 / 236
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 240
699amnoncommon united states of america, state of north carolina, state of south carolina, florida, atlantic ocean, saline water, sea water2028-04-01v4No1 / 247
280amnoncommon atlantic ocean, saline water, sea water, marine water body, depth 20m, portuguese republic2018-01-25v4No1 / 251
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 258
622amnon high in caecum compared to ileum in age 42 days research facility liverpool great britain chicken gallus gallus 2020-05-08v4No1 / 299
565amnoncommon skin, canada, farm, bos taurus, cow2019-11-21v3No1 / 310
699amnon high in atlantic ocean united states of america brazil compared to mediterranean sea italy kingdom of spain in inner tunic harbor sea squirts clavelina oblonga 2028-04-01v4No1 / 310
461amnoncommon water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, sea water2019-01-12v4No1 / 314
518amnonhigher in beginning of experiment ( high in days 1-2 compared to days 14-28 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 317
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 424
545amnoncommon atlantic ocean, ocean, depth 1000m, sediment depth 0-5cm, sediment, marine sediment2019-08-04v4No1 / 428
666amnoncommon cow, bos taurus, italy, feces2020-09-25v3No1 / 475
376amnondisappear when transferred from high salinity to low salinity (other rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora)2018-09-11v4No1 / 486
518amnoncommon bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 490
323amnoncommon water, atlantic ocean, south florida, state of florida, united states of america, surface water, depth 0cm, sea water2018-04-24v4No1 / 496
376amnonlower in salt marsh with low salinity (11) compared to higher salinity (25-30) ( high in high salinity compared to low salinity in rhizosphere saline marsh united states of america atlantic ocean sediment spartina alterniflora )2018-09-11v4No1 / 525
518amnonhigher in end of experiment (older steers) ( high in days 14-28 compared to days 1-2 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 601
592amnoncommon feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 625
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 654
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 749
466amnoncommon feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 775
480amnoncommon soil, pasture, farm, ireland2019-02-05v4No1 / 808
701amnoncommon municipality of beijing, research facility, china, male, male organism, age 2 years, rumen liquid, rumen, bos taurus, cow2028-04-01v3No1 / 946
323amnonlower in sharks compared to sea water ( high in water surface water depth 0m sea water compared to shark in atlantic ocean south florida state of florida united states of america )2018-04-24v4No1 / 971
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1015
376amnonhigher in salt marsh with low salinity (11) compared to higher salinity (25-30) ( high in low salinity compared to high salinity in rhizosphere saline marsh united states of america atlantic ocean sediment spartina alterniflora )2018-09-11v4No1 / 1030
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1321
304amnoncommon united states of america, state of california, beach, pacific ocean, water, sea water, santa cruz county2018-03-12v4No1 / 1417
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1727

Problems / suggestions? Please email info AT dbbact DOT org