Summary for ontology term: atlantic ocean

Number of annotations with term: 81

Annotations:

common ontology terms
term enrichment score
TermScore
atlantic ocean0.631342
bos taurus0.448454
cow0.395480
ireland0.297030
south florida0.256881
state of georgia0.242424
rumen0.229117
sea water0.214286
shark0.213592
holstein-friesian bull0.164948
farm0.161345
surface water0.153846
late timepoints0.132701
ocean0.129380
portuguese republic0.129032
saline marsh0.129032
spartina alterniflora0.129032
coastal water0.129032
commonwealth of massachusetts0.121212
depth 20m0.114286
30-60 days0.109890
state of florida0.106464
sediment0.092486
north america0.089888
chitin beads0.089888
lamb0.089888
age 100 days0.089888
angus steer0.089888
water0.088117
pasture0.086022
state of nebraska0.086022
post-weaning0.086022
diet0.082645
sheep0.082474
ovis aries0.076190
nasopharynx0.073394
united states of america0.071470
pacific ocean0.069565
eunicella labiata0.068966
gorgonian coral0.068966
marine water body0.066667
coral reef0.066667
gill0.066667
coral0.062500
saline water0.058824
canada0.058394
child0.052288
rhizosphere0.049383
dentition0.047619
trichodesmium0.047059
sargasso sea0.047059
depth 0cm0.047059
anal canal0.047059
depth 200-2000 m0.047059
depth 25cm0.047059
LOWER IN atlantic ocean0.047059
respiratory airway0.047059
exhaled air condensate0.047059
whale blow0.047059
LOWER IN pacific ocean0.047059
beach0.047059
santa cruz county0.047059
depth 1000m0.045977
sediment depth 0-5cm0.045977
debris0.045977
megaptera novaeangliae0.045977
humpback whale0.045977
LOWER IN early timepoints0.045455
LOWER IN sea water0.045455
ph 6-70.044944
early timepoints0.044444
LOWER IN late timepoints0.044444
biofilm0.043011
skin0.039216
marine sediment0.037383
age0.033613
state of california0.033613
soil0.028070
0-2 days0.024096
LOWER IN 30-60 days0.024096
LOWER IN 0-2 days0.024096
unshaded0.024096
sunlight0.024096
LOWER IN shaded0.024096
shaded0.024096
LOWER IN unshaded0.024096
LOWER IN sunlight0.024096
LOWER IN marine water body0.024096
LOWER IN coral reef0.024096
LOWER IN coral0.024096
LOWER IN eunicella labiata0.024096
LOWER IN gorgonian coral0.024096
low salinity0.024096
LOWER IN high salinity0.024096
high salinity0.024096
LOWER IN low salinity0.024096
LOWER IN new zealand0.024096
new zealand0.024096
LOWER IN ireland0.024096
LOWER IN cape cod canal0.024096
Fraction of dbbact annotations with this term covered by the query
TermScore
atlantic ocean0.875000
cow0.833333
ireland0.750000
state of georgia0.666667
bos taurus0.600000
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
trichodesmium0.500000
sargasso sea0.500000
south florida0.500000
shark0.500000
portuguese republic0.500000
eunicella labiata0.500000
gorgonian coral0.500000
LOWER IN marine water body0.500000
LOWER IN coral reef0.500000
LOWER IN coral0.500000
LOWER IN eunicella labiata0.500000
LOWER IN gorgonian coral0.500000
saline marsh0.500000
spartina alterniflora0.500000
low salinity0.500000
LOWER IN high salinity0.500000
high salinity0.500000
LOWER IN low salinity0.500000
LOWER IN new zealand0.500000
new zealand0.500000
LOWER IN ireland0.500000
depth 0cm0.500000
anal canal0.500000
depth 200-2000 m0.500000
north america0.500000
depth 25cm0.500000
LOWER IN atlantic ocean0.500000
LOWER IN cape cod canal0.500000
respiratory airway0.500000
exhaled air condensate0.500000
whale blow0.500000
LOWER IN pacific ocean0.500000
cape cod canal0.500000
LOWER IN vancouver0.500000
coastal water0.500000
chitin beads0.500000
LOWER IN gill0.500000
LOWER IN shark0.500000
middle timepoints0.500000
lamb0.500000
age 100 days0.500000
linseed oil food product0.500000
LOWER IN linseed oil food product0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
rumen liquid0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
angus steer0.500000
LOWER IN days 14-280.500000
days 14-280.500000
LOWER IN days 1-20.500000
beach0.500000
santa cruz county0.500000
marine water body0.333333
coral reef0.333333
LOWER IN saline water0.333333
pasture0.333333
depth 1000m0.333333
sediment depth 0-5cm0.333333
debris0.333333
megaptera novaeangliae0.333333
humpback whale0.333333
commonwealth of massachusetts0.333333
gill0.333333
depth 0m0.333333
state of nebraska0.333333
post-weaning0.333333
days 1-20.333333
late timepoints0.285714
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.543210
atlantic ocean0.493827
bos taurus0.358025
cow0.259259
sea water0.222222
farm0.197531
rumen0.197531
ireland0.185185
south florida0.172840
state of florida0.172840
feces0.148148
state of georgia0.148148
shark0.135802
water0.135802
surface water0.111111
ocean0.098765
sediment0.098765
holstein-friesian bull0.098765
late timepoints0.086420
depth 20m0.074074
portuguese republic0.074074
rhizosphere0.074074
saline marsh0.074074
spartina alterniflora0.074074
coastal water0.074074
commonwealth of massachusetts0.074074
30-60 days0.061728
diet0.061728
soil0.049383
pasture0.049383
north america0.049383
pacific ocean0.049383
chitin beads0.049383
ovis aries0.049383
sheep0.049383
lamb0.049383
child0.049383
age 100 days0.049383
nasopharynx0.049383
canada0.049383
state of nebraska0.049383
post-weaning0.049383
angus steer0.049383
skin0.037037
saline water0.037037
marine water body0.037037
eunicella labiata0.037037
gorgonian coral0.037037
coral0.037037
coral reef0.037037
dentition0.037037
gill0.037037
early timepoints0.024691
LOWER IN late timepoints0.024691
LOWER IN early timepoints0.024691
trichodesmium0.024691
sargasso sea0.024691
LOWER IN sea water0.024691
ph 6-70.024691
depth 0cm0.024691
anal canal0.024691
depth 1000m0.024691
sediment depth 0-5cm0.024691
marine sediment0.024691
biofilm0.024691
debris0.024691
depth 200-2000 m0.024691
depth 25cm0.024691
LOWER IN atlantic ocean0.024691
megaptera novaeangliae0.024691
humpback whale0.024691
respiratory airway0.024691
exhaled air condensate0.024691
whale blow0.024691
LOWER IN pacific ocean0.024691
control0.024691
LOWER IN control0.024691
age0.024691
state of california0.024691
beach0.024691
santa cruz county0.024691
0-2 days0.012346
LOWER IN 30-60 days0.012346
LOWER IN 0-2 days0.012346
unshaded0.012346
sunlight0.012346
LOWER IN shaded0.012346
shaded0.012346
LOWER IN unshaded0.012346
LOWER IN sunlight0.012346
LOWER IN saline water0.012346
LOWER IN marine water body0.012346
LOWER IN coral reef0.012346
LOWER IN coral0.012346
LOWER IN eunicella labiata0.012346
LOWER IN gorgonian coral0.012346
low salinity0.012346
LOWER IN high salinity0.012346
high salinity0.012346
LOWER IN low salinity0.012346
Exp. ID User ID Description Date Region Flag Sequences
491amnonlower in lambs fed linseed oil supplemented diet compared to control diet ( high in control diet compared to linseed oil food product in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 1
525amnoncow mitochondrial dna (other bos taurus, mitochondrion, cow)2019-07-10v4No1 / 1
491amnonhigher in lambs fed linseed oil supplemented diet compared to control diet ( high in diet linseed oil food product compared to control diet in ovis aries sheep lamb child rumen ireland farm age 100 days )2019-02-26v4No1 / 4
327amnonhigher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 4
545amnonhighfreq atlantic ocean, ocean, biofilm, debris, depth 200-2000 m2019-08-04v4No1 / 5
545amnonhighfreq sediment, sediment depth 0-5cm, depth 1000m, ocean, atlantic ocean, marine sediment2019-08-04v4No1 / 7
376amnonhighfreq rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora2018-09-11v4No1 / 8
480amnonhighfreq soil, pasture, farm, ireland2019-02-05v4No1 / 8
518amnonhighfreq bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 8
466amnonhighfreq feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 9
136amnonhighfreq sea water, trichodesmium, ocean, sargasso sea, atlantic ocean2017-04-17v4No1 / 11
323amnonhighfreq water, atlantic ocean, south florida, state of florida, united states of america, surface water, depth 0cm, sea water2018-04-24v4No1 / 12
323amnonhigh freq. in shark cloaca (highfreq atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v4No1 / 12
323amnonhigh freq. in shark skin (highfreq atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v4No1 / 13
461amnonhighfreq water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, sea water2019-01-12v4No1 / 13
280amnonhighfreq atlantic ocean, depth 20m, portuguese republic, eunicella labiata, gorgonian coral, coral, coral reef2018-01-25v4No1 / 14
323amnonhigh freq. in shark gills (highfreq atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v4No1 / 15
327amnonhighfreq bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 15
491amnonhighfreq ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 16
83amnonhighfreq bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 16
304amnonhighfreq united states of america, state of california, beach, pacific ocean, water, sea water, santa cruz county2018-03-12v4No1 / 16
466amnonhigh freq. in cow feces left in field for 30-60 days (highfreq feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 18
280amnon high in eunicella labiata coral reef gorgonian coral coral compared to saline water sea water marine water body in atlantic ocean depth 20m portuguese republic 2018-01-25v4No1 / 19
323amnonhigh freq. in shark teeth (highfreq atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v4No1 / 19
261amnonhighfreq bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 19
480amnon high in new zealand compared to ireland in soil pasture farm ph 6-7 2019-02-05v4No1 / 20
280amnonhighfreq atlantic ocean, saline water, sea water, marine water body, depth 20m, portuguese republic2018-01-25v4No1 / 21
323amnonhigher in teeth compared to skin and gills in sharks ( high in dentition compared to skin gill in atlantic ocean south florida state of florida united states of america shark )2018-04-24v4No1 / 25
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 40
327amnonlower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 45
327amnoncommon bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 50
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 67
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 80
136amnoncommon sea water, trichodesmium, ocean, sargasso sea, atlantic ocean2017-04-17v4No1 / 81
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 83
209amnon high in atlantic ocean compared to pacific ocean in north america megaptera novaeangliae humpback whale respiratory airway exhaled air condensate whale blow 2017-10-15v4No1 / 86
480amnon high in ireland compared to new zealand in soil pasture farm ph 6-7 2019-02-05v4No1 / 94
323amnonlower in teeth compared to skin and gills in sharks ( high in gill skin compared to dentition in atlantic ocean south florida state of florida united states of america shark )2018-04-24v4No1 / 98
491amnoncommon ovis aries, sheep, lamb, child, rumen, ireland, farm, age 100 days2019-02-26v4No1 / 105
323amnonhigher in sharks compared to sea water ( high in shark compared to water surface water depth 0m sea water in atlantic ocean south florida state of florida united states of america )2018-04-24v4No1 / 107
461amnonearly colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, middle timepoints, sea water)2019-01-12v4No1 / 108
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 112
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 113
461amnonlate colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, late timepoints, sea water)2019-01-12v4No1 / 120
323amnoncommon freq. in shark teeth (common atlantic ocean, south florida, state of florida, united states of america, shark, dentition)2018-04-24v4No1 / 123
280amnoncommon atlantic ocean, depth 20m, portuguese republic, eunicella labiata, gorgonian coral, coral, coral reef2018-01-25v4No1 / 128
280amnon high in marine water body sea water saline water compared to coral reef coral eunicella labiata gorgonian coral in atlantic ocean depth 20m portuguese republic 2018-01-25v4No1 / 132
461amnonlower in early compared to late timepoints in chitin beads incubated in ocean water ( high in late timepoints compared to early timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 141
209amnon high in pacific ocean vancouver compared to atlantic ocean cape cod canal in sea water ocean north america depth 25cm 2017-10-15v4No1 / 144
461amnonhigher in early compared to late timepoints in chitin beads incubated in ocean water ( high in early timepoints compared to late timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 160
376amnoncommon rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora2018-09-11v4No1 / 161
376amnonappear when transferred from high salinity to low salinity (other rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora)2018-09-11v4No1 / 161
209amnon high in cape cod canal atlantic ocean compared to vancouver pacific ocean in sea water ocean north america depth 25cm 2017-10-15v4No1 / 166
323amnoncommon in shark cloaca (common atlantic ocean, south florida, state of florida, united states of america, shark, anal canal)2018-04-24v4No1 / 167
323amnoncommon in shark gills (common atlantic ocean, south florida, state of florida, united states of america, shark, gill)2018-04-24v4No1 / 170
323amnoncommon in shark skin (common atlantic ocean, south florida, state of florida, united states of america, shark, skin)2018-04-24v4No1 / 213
209amnon high in pacific ocean compared to atlantic ocean in north america megaptera novaeangliae humpback whale respiratory airway exhaled air condensate whale blow 2017-10-15v4No1 / 219
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 221
545amnoncommon atlantic ocean, ocean, biofilm, debris, depth 200-2000 m2019-08-04v4No1 / 227
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 248
280amnoncommon atlantic ocean, saline water, sea water, marine water body, depth 20m, portuguese republic2018-01-25v4No1 / 259
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 266
461amnoncommon water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, sea water2019-01-12v4No1 / 322
518amnonhigher in beginning of experiment ( high in days 1-2 compared to days 14-28 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 325
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 432
545amnoncommon atlantic ocean, ocean, depth 1000m, sediment depth 0-5cm, sediment, marine sediment2019-08-04v4No1 / 436
376amnondisappear when transferred from high salinity to low salinity (other rhizosphere, saline marsh, united states of america, atlantic ocean, sediment, spartina alterniflora)2018-09-11v4No1 / 494
518amnoncommon bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 498
323amnoncommon water, atlantic ocean, south florida, state of florida, united states of america, surface water, depth 0cm, sea water2018-04-24v4No1 / 504
376amnonlower in salt marsh with low salinity (11) compared to higher salinity (25-30) ( high in high salinity compared to low salinity in rhizosphere saline marsh united states of america atlantic ocean sediment spartina alterniflora )2018-09-11v4No1 / 533
518amnonhigher in end of experiment (older steers) ( high in days 14-28 compared to days 1-2 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 609
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 662
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 757
466amnoncommon feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 783
480amnoncommon soil, pasture, farm, ireland2019-02-05v4No1 / 816
323amnonlower in sharks compared to sea water ( high in water surface water depth 0m sea water compared to shark in atlantic ocean south florida state of florida united states of america )2018-04-24v4No1 / 979
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1023
376amnonhigher in salt marsh with low salinity (11) compared to higher salinity (25-30) ( high in low salinity compared to high salinity in rhizosphere saline marsh united states of america atlantic ocean sediment spartina alterniflora )2018-09-11v4No1 / 1038
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1329
304amnoncommon united states of america, state of california, beach, pacific ocean, water, sea water, santa cruz county2018-03-12v4No1 / 1425
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1735

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