Summary for ontology term: biopsy site

Number of annotations with term: 16

Annotations:

common ontology terms
term enrichment score
TermScore
biopsy site0.780000
biopsy0.561151
LOWER IN biopsy0.300000
LOWER IN biopsy site0.300000
ulcerative colitis0.272727
left colon0.214286
right colon0.193548
colon0.181818
LOWER IN feces0.171429
rectum0.130435
LOWER IN luminal content0.111111
luminal content0.111111
severe0.111111
LOWER IN mild0.111111
mild0.111111
LOWER IN severe0.111111
LOWER IN left colon0.100000
LOWER IN right colon0.095238
LOWER IN rectum0.086957
LOWER IN ulcerative colitis0.086957
child0.055556
united states of america0.026201
homo sapiens0.025210
feces0.020690
adult0.013699
Fraction of dbbact annotations with this term covered by the query
TermScore
biopsy site0.750000
LOWER IN biopsy0.750000
LOWER IN biopsy site0.750000
LOWER IN luminal content0.500000
luminal content0.500000
ulcerative colitis0.500000
severe0.500000
LOWER IN mild0.500000
mild0.500000
LOWER IN severe0.500000
biopsy0.428571
colon0.333333
left colon0.250000
LOWER IN left colon0.250000
LOWER IN right colon0.200000
right colon0.200000
LOWER IN feces0.157895
LOWER IN rectum0.142857
LOWER IN ulcerative colitis0.142857
rectum0.100000
child0.031250
united states of america0.013274
homo sapiens0.012766
feces0.010949
adult0.007042
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens1.000000
united states of america1.000000
biopsy0.812500
biopsy site0.812500
adult0.250000
child0.250000
LOWER IN feces0.187500
feces0.187500
LOWER IN biopsy0.187500
LOWER IN biopsy site0.187500
left colon0.187500
right colon0.187500
ulcerative colitis0.187500
rectum0.187500
colon0.125000
LOWER IN luminal content0.062500
luminal content0.062500
LOWER IN right colon0.062500
LOWER IN left colon0.062500
LOWER IN rectum0.062500
severe0.062500
LOWER IN mild0.062500
mild0.062500
LOWER IN severe0.062500
LOWER IN ulcerative colitis0.062500
Exp. ID User ID Description Date Region Flag Sequences
409amnon high in right colon compared to left colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / -7
410amnonhigher in biopsies of severe treatment naive ulcerative colitis patients compared to mild ( high in severe ulcerative colitis compared to mild in homo sapiens child united states of america biopsy biopsy site rectum )2018-11-22v4No1 / -3
51amnonlower in stool compared to biopsies ( high in biopsy site biopsy compared to feces in homo sapiens united states of america )2017-01-19v4No1 / 6
409amnon high in left colon compared to right colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / 7
409amnondominant homo sapiens, united states of america, adult, left colon, biopsy, biopsy site2018-11-22v4No1 / 7
51amnondominant homo sapiens, biopsy site, biopsy, united states of america2017-01-19v4No1 / 8
409amnondominant homo sapiens, united states of america, adult, biopsy, biopsy site, right colon2018-11-22v4No1 / 12
410amnonlower in biopsies of severe treatment naive ulcerative colitis patients compared to mild ( high in mild compared to severe ulcerative colitis in homo sapiens child united states of america biopsy biopsy site rectum )2018-11-22v4No1 / 18
51amnonhigher in stool compared to biopsies ( high in feces compared to biopsy site biopsy in homo sapiens united states of america )2017-01-19v4No1 / 29
409amnonhigher in colon biopsies compared to stool and luminal content ( high in biopsy biopsy site compared to feces luminal content in homo sapiens united states of america )2018-11-22v4No1 / 30
51amnoncommon homo sapiens, biopsy site, biopsy, united states of america2017-01-19v4No1 / 30
409amnonlower in colon biopsies compared to stool and luminal content ( high in feces luminal content compared to biopsy biopsy site in homo sapiens united states of america )2018-11-22v4No1 / 34
409amnoncommon homo sapiens, united states of america, adult, biopsy, biopsy site, right colon2018-11-22v4No1 / 89
409amnoncommon homo sapiens, united states of america, adult, left colon, biopsy, biopsy site2018-11-22v4No1 / 110
410amnonlower in feces compared to rectal biopsies in children with treatment naive uc ( high in rectum biopsy biopsy site compared to feces in homo sapiens child united states of america ulcerative colitis )2018-11-22v4No1 / 110
410amnonhigher in feces compared to rectal biopsies in children with treatment naive uc ( high in feces compared to biopsy rectum biopsy site in homo sapiens child united states of america ulcerative colitis )2018-11-22v4No1 / 118

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