Summary for ontology term: bos taurus

Number of annotations with term: 57

Annotations:

common ontology terms
term enrichment score
TermScore
bos taurus0.948860
cow0.650062
rumen liquid0.365854
rumen0.354880
shandong province0.296296
state of georgia0.258065
holstein-friesian bull0.219178
canada0.181818
ireland0.179775
farm0.168285
30-60 days0.149254
pair of nares0.125000
angus steer0.123077
chinese bohai black beef cattle0.123077
chinese luxi yellow beef cattle0.123077
holstein dairy cow0.123077
calve0.123077
post-weaning0.115942
state of nebraska0.109589
late timepoints0.108696
juvenile organism0.103896
nasopharynx0.082474
nasal cavity0.079208
diet0.076190
LOWER IN bos taurus0.066667
LOWER IN chinese luxi yellow beef cattle0.065574
LOWER IN chinese bohai black beef cattle0.065574
municipality of beijing0.063492
age 2 years0.063492
commonwealth of pennsylvania0.056338
male organism0.056338
male0.053333
sweden0.050633
united states of america0.049948
italy0.044944
age0.040404
LOWER IN control0.036866
control0.036697
skin0.034188
0-2 days0.033898
LOWER IN 30-60 days0.033898
LOWER IN 0-2 days0.033898
unshaded0.033898
sunlight0.033898
LOWER IN shaded0.033898
shaded0.033898
LOWER IN unshaded0.033898
LOWER IN sunlight0.033898
LOWER IN normal feed0.033898
LOWER IN restricted diet0.033898
660 days0.033898
LOWER IN 605 days0.033898
605 days0.033898
LOWER IN 660 days0.033898
LOWER IN rumen solids0.033898
rumen solids0.033898
LOWER IN rumen liquid0.033898
LOWER IN farm0.033898
corn diet0.033898
40mdgs diet0.033898
LOWER IN 27cds diet0.033898
LOWER IN 55cs diet0.033898
27cds diet0.033898
55cs diet0.033898
LOWER IN corn diet0.033898
LOWER IN 40mdgs diet0.033898
LOWER IN days 14-280.033898
days 14-280.033898
LOWER IN days 1-20.033898
LOWER IN high milk yield0.033898
low milk yield0.033898
LOWER IN low milk yield0.033898
high milk yield0.033898
LOWER IN chinese laoshan milk goat0.033898
LOWER IN goat0.033898
LOWER IN capra hircus0.033898
chinese laoshan milk goat0.033898
low selenium0.033898
LOWER IN low selenium0.033898
restricted feed0.033333
days 1-20.033333
LOWER IN selenium0.033333
selenium0.033333
normal diet0.032258
goat0.032258
capra hircus0.032258
LOWER IN early timepoints0.031250
early timepoints0.030303
LOWER IN late timepoints0.030303
research facility0.029598
china0.029598
mitochondrion0.028986
LOWER IN antibiotic0.028571
antibiotic0.028169
feces0.027754
homo sapiens0.007590
Fraction of dbbact annotations with this term covered by the query
TermScore
bos taurus0.933333
cow0.900000
canada0.666667
LOWER IN bos taurus0.666667
rumen liquid0.600000
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
holstein-friesian bull0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
LOWER IN farm0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
angus steer0.500000
LOWER IN days 14-280.500000
days 14-280.500000
LOWER IN days 1-20.500000
shandong province0.500000
chinese bohai black beef cattle0.500000
chinese luxi yellow beef cattle0.500000
holstein dairy cow0.500000
LOWER IN high milk yield0.500000
low milk yield0.500000
LOWER IN low milk yield0.500000
high milk yield0.500000
LOWER IN chinese luxi yellow beef cattle0.500000
LOWER IN chinese bohai black beef cattle0.500000
LOWER IN chinese laoshan milk goat0.500000
LOWER IN goat0.500000
LOWER IN capra hircus0.500000
chinese laoshan milk goat0.500000
calve0.500000
low selenium0.500000
LOWER IN low selenium0.500000
state of georgia0.333333
restricted feed0.333333
municipality of beijing0.333333
age 2 years0.333333
post-weaning0.333333
days 1-20.333333
LOWER IN selenium0.333333
selenium0.333333
rumen0.277778
ireland0.250000
state of nebraska0.250000
normal diet0.200000
goat0.200000
capra hircus0.200000
juvenile organism0.200000
pair of nares0.153846
late timepoints0.142857
LOWER IN early timepoints0.142857
commonwealth of pennsylvania0.142857
male organism0.142857
farm0.133333
early timepoints0.111111
LOWER IN late timepoints0.111111
male0.111111
nasopharynx0.100000
sweden0.090909
nasal cavity0.090909
diet0.083333
mitochondrion0.083333
LOWER IN antibiotic0.076923
antibiotic0.071429
italy0.062500
age0.047619
skin0.033333
united states of america0.026549
LOWER IN control0.025000
control0.024845
research facility0.015748
china0.015748
feces0.014599
homo sapiens0.004255
Fraction of annotations for the query sequences containing the term
TermScore
bos taurus0.964912
cow0.508772
rumen0.491228
united states of america0.421053
feces0.280702
rumen liquid0.263158
research facility0.245614
china0.245614
farm0.228070
state of georgia0.210526
shandong province0.210526
holstein-friesian bull0.140351
ireland0.140351
canada0.105263
pair of nares0.105263
late timepoints0.087719
30-60 days0.087719
nasopharynx0.070175
control0.070175
diet0.070175
LOWER IN control0.070175
state of nebraska0.070175
post-weaning0.070175
angus steer0.070175
chinese bohai black beef cattle0.070175
chinese luxi yellow beef cattle0.070175
holstein dairy cow0.070175
nasal cavity0.070175
calve0.070175
juvenile organism0.070175
commonwealth of pennsylvania0.035088
italy0.035088
skin0.035088
sweden0.035088
age0.035088
municipality of beijing0.035088
male0.035088
male organism0.035088
age 2 years0.035088
homo sapiens0.035088
LOWER IN bos taurus0.035088
LOWER IN chinese luxi yellow beef cattle0.035088
LOWER IN chinese bohai black beef cattle0.035088
early timepoints0.017544
0-2 days0.017544
LOWER IN late timepoints0.017544
LOWER IN 30-60 days0.017544
LOWER IN early timepoints0.017544
LOWER IN 0-2 days0.017544
unshaded0.017544
sunlight0.017544
LOWER IN shaded0.017544
shaded0.017544
LOWER IN unshaded0.017544
LOWER IN sunlight0.017544
LOWER IN antibiotic0.017544
restricted feed0.017544
LOWER IN normal feed0.017544
LOWER IN restricted diet0.017544
normal diet0.017544
660 days0.017544
LOWER IN 605 days0.017544
605 days0.017544
LOWER IN 660 days0.017544
LOWER IN rumen solids0.017544
rumen solids0.017544
LOWER IN rumen liquid0.017544
antibiotic0.017544
LOWER IN farm0.017544
corn diet0.017544
40mdgs diet0.017544
LOWER IN 27cds diet0.017544
LOWER IN 55cs diet0.017544
27cds diet0.017544
55cs diet0.017544
LOWER IN corn diet0.017544
LOWER IN 40mdgs diet0.017544
days 1-20.017544
LOWER IN days 14-280.017544
days 14-280.017544
LOWER IN days 1-20.017544
LOWER IN high milk yield0.017544
low milk yield0.017544
LOWER IN low milk yield0.017544
high milk yield0.017544
LOWER IN chinese laoshan milk goat0.017544
LOWER IN goat0.017544
LOWER IN capra hircus0.017544
mitochondrion0.017544
chinese laoshan milk goat0.017544
goat0.017544
capra hircus0.017544
low selenium0.017544
LOWER IN selenium0.017544
selenium0.017544
LOWER IN low selenium0.017544
Exp. ID User ID Description Date Region Flag Sequences
525amnoncow mitochondrial dna (other bos taurus, mitochondrion, cow)2019-07-10v4No1 / -7
157amnonhigh in nares of calves fed alfalfa not fortified with selenium compared to slenium fortified alfalfa ( high in control low selenium compared to selenium in nasal cavity bos taurus calve united states of america juvenile organism pair of nares )2017-07-04v4No1 / -7
327amnonhigher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in bos taurus cow nasopharynx canada )2018-04-30v4No1 / -4
592amnondominant feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / -2
666amnondominant cow, bos taurus, italy, feces2020-09-25v3No1 / -2
518amnondominant bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 0
466amnondominant feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 1
701amnondominant municipality of beijing, research facility, china, male, male organism, age 2 years, rumen liquid, rumen, bos taurus, cow2028-04-01v3No1 / 1
687amnondominant shandong province, bos taurus, chinese bohai black beef cattle, research facility, china, rumen liquid, rumen2028-03-09v4No1 / 1
687amnondominant chinese luxi yellow beef cattle, bos taurus, shandong province, research facility, china, rumen liquid, rumen2028-03-09v4No1 / 2
687amnon high in chinese bohai black beef cattle compared to chinese luxi yellow beef cattle in bos taurus shandong province research facility china rumen liquid rumen 2028-03-09v4No1 / 3
82amnonhigh freq. in dairy cow rumen fluid (dominant bos taurus, sweden, rumen)2017-03-05v4No1 / 4
565amnondominant skin, canada, farm, bos taurus, cow2019-11-21v3No1 / 4
157amnonhigh freq. in naers of weened calves (dominant nasal cavity, bos taurus, calve, united states of america, juvenile organism, pair of nares)2017-07-04v4No1 / 5
327amnondominant bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 7
687amnondominant holstein dairy cow, bos taurus, shandong province, research facility, china, rumen liquid, rumen2028-03-09v4No1 / 7
83amnondominant bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 8
466amnonhigh freq. in cow feces left in field for 30-60 days (dominant feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 10
261amnondominant bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 11
157amnonlow in nares of calves fed alfalfa not fortified with selenium compared to slenium fortified alfalfa ( high in selenium compared to control low selenium in nasal cavity bos taurus calve united states of america juvenile organism pair of nares )2017-07-04v4No1 / 18
193amnonlower in nares of people working in dairy farms ( high in control compared to bos taurus farm in homo sapiens united states of america pair of nares )2017-09-05v4No1 / 21
687amnon high in chinese luxi yellow beef cattle compared to chinese bohai black beef cattle in bos taurus shandong province research facility china rumen liquid rumen 2028-03-09v4No1 / 27
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 32
687amnon high in high milk yield compared to low milk yield in holstein dairy cow bos taurus shandong province research facility china rumen liquid rumen 2028-03-09v4No1 / 33
327amnonlower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 37
327amnoncommon bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 42
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 59
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 72
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 75
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 104
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 105
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 213
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 240
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 258
565amnoncommon skin, canada, farm, bos taurus, cow2019-11-21v3No1 / 310
687amnon high in chinese laoshan milk goat goat capra hircus compared to chinese bohai black beef cattle chinese luxi yellow beef cattle bos taurus in shandong province research facility china rumen liquid rumen 2028-03-09v4No1 / 311
518amnonhigher in beginning of experiment ( high in days 1-2 compared to days 14-28 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 317
687amnon high in low milk yield compared to high milk yield in holstein dairy cow bos taurus shandong province research facility china rumen liquid rumen 2028-03-09v4No1 / 368
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 424
666amnoncommon cow, bos taurus, italy, feces2020-09-25v3No1 / 475
518amnoncommon bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 490
687amnoncommon holstein dairy cow, bos taurus, shandong province, research facility, china, rumen liquid, rumen2028-03-09v4No1 / 586
518amnonhigher in end of experiment (older steers) ( high in days 14-28 compared to days 1-2 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 601
592amnoncommon feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 625
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 654
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 749
157amnoncommon in naers of weened calves (common nasal cavity, bos taurus, calve, united states of america, juvenile organism, pair of nares)2017-07-04v4No1 / 758
466amnoncommon feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 775
701amnoncommon municipality of beijing, research facility, china, male, male organism, age 2 years, rumen liquid, rumen, bos taurus, cow2028-04-01v3No1 / 946
193amnonhigher in nares of people working in dairy farms ( high in bos taurus farm compared to control in homo sapiens united states of america pair of nares )2017-09-05v4No1 / 984
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1015
687amnon high in chinese bohai black beef cattle chinese luxi yellow beef cattle bos taurus compared to chinese laoshan milk goat goat capra hircus in shandong province research facility china rumen liquid rumen 2028-03-09v4No1 / 1015
687amnoncommon chinese luxi yellow beef cattle, bos taurus, shandong province, research facility, china, rumen liquid, rumen2028-03-09v4No1 / 1032
687amnoncommon shandong province, bos taurus, chinese bohai black beef cattle, research facility, china, rumen liquid, rumen2028-03-09v4No1 / 1140
82amnoncommon in dairy cow rumen fluid (common bos taurus, sweden, rumen)2017-03-05v4No1 / 1314
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1321
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1727

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