Summary for ontology term: bos taurus

Number of annotations with term: 41

Annotations:

common ontology terms
term enrichment score
TermScore
bos taurus0.945220
cow0.718686
state of georgia0.369231
rumen0.288660
holstein-friesian bull0.280702
canada0.255319
ireland0.219178
farm0.207171
30-60 days0.196078
angus steer0.163265
calve0.163265
pair of nares0.162162
state of nebraska0.150943
post-weaning0.150943
juvenile organism0.140351
late timepoints0.131579
nasopharynx0.103896
nasal cavity0.103896
diet0.089888
commonwealth of pennsylvania0.081633
sweden0.065574
united states of america0.059333
age0.050633
0-2 days0.046512
LOWER IN 30-60 days0.046512
LOWER IN 0-2 days0.046512
unshaded0.046512
sunlight0.046512
LOWER IN shaded0.046512
shaded0.046512
LOWER IN unshaded0.046512
LOWER IN sunlight0.046512
restricted feed0.046512
LOWER IN normal feed0.046512
LOWER IN restricted diet0.046512
660 days0.046512
LOWER IN 605 days0.046512
605 days0.046512
LOWER IN 660 days0.046512
rumen liquid0.046512
LOWER IN rumen solids0.046512
rumen solids0.046512
LOWER IN rumen liquid0.046512
LOWER IN bos taurus0.046512
LOWER IN farm0.046512
corn diet0.046512
40mdgs diet0.046512
LOWER IN 27cds diet0.046512
LOWER IN 55cs diet0.046512
27cds diet0.046512
55cs diet0.046512
LOWER IN corn diet0.046512
LOWER IN 40mdgs diet0.046512
LOWER IN days 14-280.046512
days 14-280.046512
LOWER IN days 1-20.046512
low selenium0.046512
LOWER IN low selenium0.046512
LOWER IN control0.045455
days 1-20.045455
LOWER IN selenium0.045455
selenium0.045455
control0.045198
skin0.043956
normal diet0.043478
LOWER IN early timepoints0.041667
early timepoints0.040000
LOWER IN late timepoints0.040000
LOWER IN antibiotic0.040000
mitochondrion0.039216
antibiotic0.038462
feces0.026457
homo sapiens0.010283
Fraction of dbbact annotations with this term covered by the query
TermScore
canada1.000000
bos taurus0.916667
cow0.875000
state of georgia0.500000
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
rumen liquid0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
LOWER IN bos taurus0.500000
LOWER IN farm0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
angus steer0.500000
LOWER IN days 14-280.500000
days 14-280.500000
LOWER IN days 1-20.500000
calve0.500000
low selenium0.500000
LOWER IN low selenium0.500000
state of nebraska0.333333
post-weaning0.333333
days 1-20.333333
LOWER IN selenium0.333333
selenium0.333333
commonwealth of pennsylvania0.250000
rumen0.250000
ireland0.250000
juvenile organism0.250000
normal diet0.200000
pair of nares0.181818
farm0.153846
late timepoints0.142857
LOWER IN early timepoints0.142857
early timepoints0.111111
LOWER IN late timepoints0.111111
nasopharynx0.111111
LOWER IN antibiotic0.111111
nasal cavity0.111111
sweden0.100000
mitochondrion0.100000
antibiotic0.090909
diet0.083333
age0.052632
skin0.040000
united states of america0.031250
LOWER IN control0.029630
control0.029412
feces0.013761
homo sapiens0.005747
Fraction of annotations for the query sequences containing the term
TermScore
bos taurus0.975610
cow0.609756
united states of america0.585366
feces0.341463
rumen0.341463
farm0.317073
state of georgia0.292683
holstein-friesian bull0.195122
ireland0.195122
canada0.146341
pair of nares0.146341
late timepoints0.121951
30-60 days0.121951
nasopharynx0.097561
control0.097561
diet0.097561
LOWER IN control0.097561
state of nebraska0.097561
post-weaning0.097561
angus steer0.097561
nasal cavity0.097561
calve0.097561
juvenile organism0.097561
commonwealth of pennsylvania0.048780
skin0.048780
sweden0.048780
age0.048780
homo sapiens0.048780
early timepoints0.024390
0-2 days0.024390
LOWER IN late timepoints0.024390
LOWER IN 30-60 days0.024390
LOWER IN early timepoints0.024390
LOWER IN 0-2 days0.024390
unshaded0.024390
sunlight0.024390
LOWER IN shaded0.024390
shaded0.024390
LOWER IN unshaded0.024390
LOWER IN sunlight0.024390
LOWER IN antibiotic0.024390
restricted feed0.024390
LOWER IN normal feed0.024390
LOWER IN restricted diet0.024390
normal diet0.024390
660 days0.024390
LOWER IN 605 days0.024390
605 days0.024390
LOWER IN 660 days0.024390
rumen liquid0.024390
LOWER IN rumen solids0.024390
rumen solids0.024390
LOWER IN rumen liquid0.024390
antibiotic0.024390
LOWER IN bos taurus0.024390
LOWER IN farm0.024390
corn diet0.024390
40mdgs diet0.024390
LOWER IN 27cds diet0.024390
LOWER IN 55cs diet0.024390
27cds diet0.024390
55cs diet0.024390
LOWER IN corn diet0.024390
LOWER IN 40mdgs diet0.024390
days 1-20.024390
LOWER IN days 14-280.024390
days 14-280.024390
LOWER IN days 1-20.024390
mitochondrion0.024390
low selenium0.024390
LOWER IN selenium0.024390
selenium0.024390
LOWER IN low selenium0.024390
Exp. ID User ID Description Date Region Flag Sequences
525amnoncow mitochondrial dna (other bos taurus, mitochondrion, cow)2019-07-10v4No1 / 1
157amnonhigh in nares of calves fed alfalfa not fortified with selenium compared to slenium fortified alfalfa ( high in control low selenium compared to selenium in nasal cavity bos taurus calve united states of america juvenile organism pair of nares )2017-07-04v4No1 / 1
327amnonhigher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 4
592amnondominant commonwealth of pennsylvania, farm, cow, bos taurus, united states of america, feces2020-02-18v1No1 / 6
518amnondominant bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 8
466amnondominant feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 9
82amnonhigh freq. in dairy cow rumen fluid (dominant bos taurus, sweden, rumen)2017-03-05v4No1 / 12
565amnondominant cow, bos taurus, farm, canada, skin2019-11-21v3No1 / 12
157amnonhigh freq. in naers of weened calves (dominant nasal cavity, bos taurus, calve, united states of america, juvenile organism, pair of nares)2017-07-04v4No1 / 13
327amnondominant bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 15
83amnondominant bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 16
466amnonhigh freq. in cow feces left in field for 30-60 days (dominant feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 18
261amnondominant bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 19
157amnonlow in nares of calves fed alfalfa not fortified with selenium compared to slenium fortified alfalfa ( high in selenium compared to control low selenium in nasal cavity bos taurus calve united states of america juvenile organism pair of nares )2017-07-04v4No1 / 26
193amnonlower in nares of people working in dairy farms ( high in control compared to bos taurus farm in homo sapiens united states of america pair of nares )2017-09-05v4No1 / 29
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 40
327amnonlower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 45
327amnoncommon bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 50
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 67
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 80
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 83
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 112
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 113
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 221
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 248
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 266
565amnoncommon cow, bos taurus, farm, canada, skin2019-11-21v3No1 / 318
518amnonhigher in beginning of experiment ( high in days 1-2 compared to days 14-28 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 325
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 432
518amnoncommon bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 498
518amnonhigher in end of experiment (older steers) ( high in days 14-28 compared to days 1-2 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 609
592amnoncommon commonwealth of pennsylvania, farm, cow, bos taurus, united states of america, feces2020-02-18v1No1 / 633
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 662
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 757
157amnoncommon in naers of weened calves (common nasal cavity, bos taurus, calve, united states of america, juvenile organism, pair of nares)2017-07-04v4No1 / 766
466amnoncommon feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 783
193amnonhigher in nares of people working in dairy farms ( high in bos taurus farm compared to control in homo sapiens united states of america pair of nares )2017-09-05v4No1 / 992
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1023
82amnoncommon in dairy cow rumen fluid (common bos taurus, sweden, rumen)2017-03-05v4No1 / 1322
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1329
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1735

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