Summary for ontology term: bos taurus

Number of annotations with term: 37

Annotations:

common ontology terms
term enrichment score
TermScore
bos taurus0.935065
cow0.675241
state of georgia0.436364
rumen0.316981
holstein-friesian bull0.301887
ireland0.231884
30-60 days0.212766
pair of nares0.187500
angus steer0.177778
calve0.177778
state of nebraska0.163265
post-weaning0.163265
juvenile organism0.150943
late timepoints0.138889
farm0.132353
nasopharynx0.123077
nasal cavity0.109589
diet0.094118
canada0.086022
sweden0.075472
age0.053333
united states of america0.052244
0-2 days0.051282
LOWER IN 30-60 days0.051282
LOWER IN 0-2 days0.051282
unshaded0.051282
sunlight0.051282
LOWER IN shaded0.051282
shaded0.051282
LOWER IN unshaded0.051282
LOWER IN sunlight0.051282
restricted feed0.051282
LOWER IN normal feed0.051282
LOWER IN restricted diet0.051282
660 days0.051282
LOWER IN 605 days0.051282
605 days0.051282
LOWER IN 660 days0.051282
rumen liquid0.051282
LOWER IN rumen solids0.051282
rumen solids0.051282
LOWER IN rumen liquid0.051282
LOWER IN bos taurus0.051282
LOWER IN farm0.051282
corn diet0.051282
40mdgs diet0.051282
LOWER IN 27cds diet0.051282
LOWER IN 55cs diet0.051282
27cds diet0.051282
55cs diet0.051282
LOWER IN corn diet0.051282
LOWER IN 40mdgs diet0.051282
LOWER IN days 14-280.051282
LOWER IN days 1-20.051282
days 14-280.051282
low selenium0.051282
LOWER IN low selenium0.051282
LOWER IN control0.051282
control0.050955
days 1-20.050000
LOWER IN selenium0.050000
selenium0.050000
normal diet0.047619
LOWER IN early timepoints0.045455
early timepoints0.043478
LOWER IN late timepoints0.043478
LOWER IN antibiotic0.043478
antibiotic0.042553
mitochondrion0.042553
feces0.019688
homo sapiens0.011527
Fraction of dbbact annotations with this term covered by the query
TermScore
bos taurus0.900000
cow0.833333
state of georgia0.666667
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
rumen liquid0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
LOWER IN bos taurus0.500000
LOWER IN farm0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
angus steer0.500000
LOWER IN days 14-280.500000
LOWER IN days 1-20.500000
days 14-280.500000
calve0.500000
low selenium0.500000
LOWER IN low selenium0.500000
state of nebraska0.333333
post-weaning0.333333
days 1-20.333333
LOWER IN selenium0.333333
selenium0.333333
rumen0.272727
ireland0.250000
juvenile organism0.250000
pair of nares0.222222
normal diet0.200000
late timepoints0.142857
LOWER IN early timepoints0.142857
nasopharynx0.142857
sweden0.125000
early timepoints0.111111
LOWER IN late timepoints0.111111
LOWER IN antibiotic0.111111
nasal cavity0.111111
antibiotic0.100000
mitochondrion0.100000
farm0.090909
diet0.083333
canada0.071429
age0.052632
LOWER IN control0.033613
control0.033333
united states of america0.027322
feces0.010152
homo sapiens0.006452
Fraction of annotations for the query sequences containing the term
TermScore
bos taurus0.972973
united states of america0.594595
cow0.567568
rumen0.378378
feces0.324324
state of georgia0.324324
farm0.243243
holstein-friesian bull0.216216
ireland0.216216
pair of nares0.162162
late timepoints0.135135
30-60 days0.135135
nasopharynx0.108108
canada0.108108
control0.108108
diet0.108108
LOWER IN control0.108108
state of nebraska0.108108
angus steer0.108108
post-weaning0.108108
nasal cavity0.108108
calve0.108108
juvenile organism0.108108
sweden0.054054
age0.054054
homo sapiens0.054054
early timepoints0.027027
0-2 days0.027027
LOWER IN late timepoints0.027027
LOWER IN 30-60 days0.027027
LOWER IN early timepoints0.027027
LOWER IN 0-2 days0.027027
unshaded0.027027
sunlight0.027027
LOWER IN shaded0.027027
shaded0.027027
LOWER IN unshaded0.027027
LOWER IN sunlight0.027027
LOWER IN antibiotic0.027027
restricted feed0.027027
LOWER IN normal feed0.027027
LOWER IN restricted diet0.027027
normal diet0.027027
660 days0.027027
LOWER IN 605 days0.027027
605 days0.027027
LOWER IN 660 days0.027027
rumen liquid0.027027
LOWER IN rumen solids0.027027
rumen solids0.027027
LOWER IN rumen liquid0.027027
antibiotic0.027027
LOWER IN bos taurus0.027027
LOWER IN farm0.027027
corn diet0.027027
40mdgs diet0.027027
LOWER IN 27cds diet0.027027
LOWER IN 55cs diet0.027027
27cds diet0.027027
55cs diet0.027027
LOWER IN corn diet0.027027
LOWER IN 40mdgs diet0.027027
LOWER IN days 14-280.027027
days 1-20.027027
LOWER IN days 1-20.027027
days 14-280.027027
mitochondrion0.027027
low selenium0.027027
LOWER IN selenium0.027027
selenium0.027027
LOWER IN low selenium0.027027
Exp. ID User ID Description Date Region Flag Sequences
525amnoncow mitochondrial dna (other cow, mitochondrion, bos taurus)2019-07-10v4No1 / 1
157amnonhigh in nares of calves fed alfalfa not fortified with selenium compared to slenium fortified alfalfa ( high in control low selenium compared to selenium in nasal cavity bos taurus calve united states of america juvenile organism pair of nares )2017-07-04v4No1 / 1
327amnonhigher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 4
518amnonhighfreq angus steer, post-weaning, state of georgia, united states of america, feces, cow, bos taurus2019-06-11v4No1 / 8
466amnonhighfreq feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 9
82amnonhigh freq. in dairy cow rumen fluid (highfreq bos taurus, sweden, rumen)2017-03-05v4No1 / 12
157amnonhigh freq. in naers of weened calves (highfreq nasal cavity, bos taurus, calve, united states of america, juvenile organism, pair of nares)2017-07-04v4No1 / 13
327amnonhighfreq bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 15
83amnonhighfreq bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 16
466amnonhigh freq. in cow feces left in field for 30-60 days (highfreq feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 18
261amnonhighfreq bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 19
157amnonlow in nares of calves fed alfalfa not fortified with selenium compared to slenium fortified alfalfa ( high in selenium compared to control low selenium in nasal cavity bos taurus calve united states of america juvenile organism pair of nares )2017-07-04v4No1 / 26
193amnonlower in nares of people working in dairy farms ( high in control compared to bos taurus farm in homo sapiens united states of america pair of nares )2017-09-05v4No1 / 29
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 40
327amnonlower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 45
327amnoncommon bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 50
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 67
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 80
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 83
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 112
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 113
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 221
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 248
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 266
518amnonhigher in beginning of experiment ( high in days 1-2 compared to days 14-28 in angus steer post-weaning state of georgia united states of america feces cow bos taurus )2019-06-11v4No1 / 325
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 432
518amnoncommon angus steer, post-weaning, state of georgia, united states of america, feces, cow, bos taurus2019-06-11v4No1 / 498
518amnonhigher in end of experiment (older steers) ( high in days 14-28 compared to days 1-2 in angus steer post-weaning state of georgia united states of america feces cow bos taurus )2019-06-11v4No1 / 609
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 662
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 757
157amnoncommon in naers of weened calves (common nasal cavity, bos taurus, calve, united states of america, juvenile organism, pair of nares)2017-07-04v4No1 / 766
466amnoncommon feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 783
193amnonhigher in nares of people working in dairy farms ( high in bos taurus farm compared to control in homo sapiens united states of america pair of nares )2017-09-05v4No1 / 992
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1023
82amnoncommon in dairy cow rumen fluid (common bos taurus, sweden, rumen)2017-03-05v4No1 / 1322
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1329
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1735

Problems / suggestions? Please email info AT dbbact DOT org