Summary for ontology term: bos taurus

Number of annotations with term: 39

Annotations:

common ontology terms
term enrichment score
TermScore
bos taurus0.940594
cow0.698734
state of georgia0.421053
rumen0.294737
holstein-friesian bull0.290909
canada0.266667
ireland0.225352
30-60 days0.204082
pair of nares0.181818
farm0.178378
angus steer0.170213
calve0.170213
state of nebraska0.156863
post-weaning0.156863
juvenile organism0.145455
late timepoints0.135135
nasopharynx0.119403
nasal cavity0.106667
diet0.091954
sweden0.072727
age0.051948
united states of america0.051318
LOWER IN control0.050000
control0.049689
0-2 days0.048780
LOWER IN 30-60 days0.048780
LOWER IN 0-2 days0.048780
unshaded0.048780
sunlight0.048780
LOWER IN shaded0.048780
shaded0.048780
LOWER IN unshaded0.048780
LOWER IN sunlight0.048780
restricted feed0.048780
LOWER IN normal feed0.048780
LOWER IN restricted diet0.048780
660 days0.048780
LOWER IN 605 days0.048780
605 days0.048780
LOWER IN 660 days0.048780
rumen liquid0.048780
LOWER IN rumen solids0.048780
rumen solids0.048780
LOWER IN rumen liquid0.048780
LOWER IN bos taurus0.048780
LOWER IN farm0.048780
corn diet0.048780
40mdgs diet0.048780
LOWER IN 27cds diet0.048780
LOWER IN 55cs diet0.048780
27cds diet0.048780
55cs diet0.048780
LOWER IN corn diet0.048780
LOWER IN 40mdgs diet0.048780
LOWER IN days 14-280.048780
days 14-280.048780
LOWER IN days 1-20.048780
low selenium0.048780
LOWER IN low selenium0.048780
days 1-20.047619
LOWER IN selenium0.047619
selenium0.047619
normal diet0.045455
skin0.044944
LOWER IN early timepoints0.043478
early timepoints0.041667
LOWER IN late timepoints0.041667
LOWER IN antibiotic0.041667
antibiotic0.040816
mitochondrion0.040816
feces0.019277
homo sapiens0.011331
Fraction of dbbact annotations with this term covered by the query
TermScore
canada1.000000
bos taurus0.909091
cow0.857143
state of georgia0.666667
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
holstein-friesian bull0.500000
restricted feed0.500000
LOWER IN normal feed0.500000
LOWER IN restricted diet0.500000
660 days0.500000
LOWER IN 605 days0.500000
605 days0.500000
LOWER IN 660 days0.500000
rumen liquid0.500000
LOWER IN rumen solids0.500000
rumen solids0.500000
LOWER IN rumen liquid0.500000
LOWER IN bos taurus0.500000
LOWER IN farm0.500000
corn diet0.500000
40mdgs diet0.500000
LOWER IN 27cds diet0.500000
LOWER IN 55cs diet0.500000
27cds diet0.500000
55cs diet0.500000
LOWER IN corn diet0.500000
LOWER IN 40mdgs diet0.500000
angus steer0.500000
LOWER IN days 14-280.500000
days 14-280.500000
LOWER IN days 1-20.500000
calve0.500000
low selenium0.500000
LOWER IN low selenium0.500000
state of nebraska0.333333
post-weaning0.333333
days 1-20.333333
LOWER IN selenium0.333333
selenium0.333333
rumen0.250000
ireland0.250000
juvenile organism0.250000
pair of nares0.222222
normal diet0.200000
late timepoints0.142857
LOWER IN early timepoints0.142857
nasopharynx0.142857
farm0.130435
sweden0.125000
early timepoints0.111111
LOWER IN late timepoints0.111111
LOWER IN antibiotic0.111111
nasal cavity0.111111
antibiotic0.100000
mitochondrion0.100000
diet0.083333
age0.052632
skin0.040000
LOWER IN control0.033058
control0.032787
united states of america0.026882
feces0.009950
homo sapiens0.006369
Fraction of annotations for the query sequences containing the term
TermScore
bos taurus0.974359
cow0.589744
united states of america0.564103
rumen0.358974
feces0.307692
state of georgia0.307692
farm0.282051
holstein-friesian bull0.205128
ireland0.205128
canada0.153846
pair of nares0.153846
late timepoints0.128205
30-60 days0.128205
nasopharynx0.102564
control0.102564
diet0.102564
LOWER IN control0.102564
state of nebraska0.102564
post-weaning0.102564
angus steer0.102564
nasal cavity0.102564
calve0.102564
juvenile organism0.102564
skin0.051282
sweden0.051282
age0.051282
homo sapiens0.051282
early timepoints0.025641
0-2 days0.025641
LOWER IN late timepoints0.025641
LOWER IN 30-60 days0.025641
LOWER IN early timepoints0.025641
LOWER IN 0-2 days0.025641
unshaded0.025641
sunlight0.025641
LOWER IN shaded0.025641
shaded0.025641
LOWER IN unshaded0.025641
LOWER IN sunlight0.025641
LOWER IN antibiotic0.025641
restricted feed0.025641
LOWER IN normal feed0.025641
LOWER IN restricted diet0.025641
normal diet0.025641
660 days0.025641
LOWER IN 605 days0.025641
605 days0.025641
LOWER IN 660 days0.025641
rumen liquid0.025641
LOWER IN rumen solids0.025641
rumen solids0.025641
LOWER IN rumen liquid0.025641
antibiotic0.025641
LOWER IN bos taurus0.025641
LOWER IN farm0.025641
corn diet0.025641
40mdgs diet0.025641
LOWER IN 27cds diet0.025641
LOWER IN 55cs diet0.025641
27cds diet0.025641
55cs diet0.025641
LOWER IN corn diet0.025641
LOWER IN 40mdgs diet0.025641
days 1-20.025641
LOWER IN days 14-280.025641
days 14-280.025641
LOWER IN days 1-20.025641
mitochondrion0.025641
low selenium0.025641
LOWER IN selenium0.025641
selenium0.025641
LOWER IN low selenium0.025641
Exp. ID User ID Description Date Region Flag Sequences
525amnoncow mitochondrial dna (other bos taurus, mitochondrion, cow)2019-07-10v4No1 / 1
157amnonhigh in nares of calves fed alfalfa not fortified with selenium compared to slenium fortified alfalfa ( high in control low selenium compared to selenium in nasal cavity bos taurus calve united states of america juvenile organism pair of nares )2017-07-04v4No1 / 1
327amnonhigher in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in antibiotic compared to control in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 4
518amnonhighfreq bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 8
466amnonhighfreq feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 9
82amnonhigh freq. in dairy cow rumen fluid (highfreq bos taurus, sweden, rumen)2017-03-05v4No1 / 12
565amnonhighfreq cow, bos taurus, farm, canada, skin2019-11-21v3No1 / 12
157amnonhigh freq. in naers of weened calves (highfreq nasal cavity, bos taurus, calve, united states of america, juvenile organism, pair of nares)2017-07-04v4No1 / 13
327amnonhighfreq bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 15
83amnonhighfreq bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 16
466amnonhigh freq. in cow feces left in field for 30-60 days (highfreq feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 18
261amnonhighfreq bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 19
157amnonlow in nares of calves fed alfalfa not fortified with selenium compared to slenium fortified alfalfa ( high in selenium compared to control low selenium in nasal cavity bos taurus calve united states of america juvenile organism pair of nares )2017-07-04v4No1 / 26
193amnonlower in nares of people working in dairy farms ( high in control compared to bos taurus farm in homo sapiens united states of america pair of nares )2017-09-05v4No1 / 29
83amnonhigher in rumen liquids compared to solids in normal diet cows ( high in rumen liquid compared to rumen solids in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 40
327amnonlower in nasopharynx of antibiotics treated cows compared to cows without antibiotic injection ( high in control compared to antibiotic in bos taurus cow nasopharynx canada )2018-04-30v4No1 / 45
327amnoncommon bos taurus, cow, nasopharynx, canada2018-04-30v4No1 / 50
83amnonhigher in rumen solids compared to liquid in normal diet cows ( high in rumen solids compared to rumen liquid in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 67
83amnonhigher in earlier timepoint (yonger age) in cow rumen normal diet ( high in 605 days age compared to 660 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 80
261amnondiet dependent in cow rumen ( high in diet corn diet 40mdgs diet compared to 27cds diet 55cs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 83
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 112
261amnondiet dependent in cow rumen ( high in diet 27cds diet 55cs diet compared to corn diet 40mdgs diet in bos taurus cow rumen united states of america state of nebraska )2017-12-10v4No1 / 113
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 221
83amnonhigher in later timepoint (older age) in cow rumen normal diet ( high in age 660 days compared to 605 days in bos taurus rumen holstein-friesian bull ireland )2017-03-05v4No1 / 248
261amnoncommon bos taurus, cow, rumen, united states of america, state of nebraska2017-12-10v4No1 / 266
565amnoncommon cow, bos taurus, farm, canada, skin2019-11-21v3No1 / 318
518amnonhigher in beginning of experiment ( high in days 1-2 compared to days 14-28 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 325
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 432
518amnoncommon bos taurus, cow, feces, united states of america, state of georgia, post-weaning, angus steer2019-06-11v4No1 / 498
518amnonhigher in end of experiment (older steers) ( high in days 14-28 compared to days 1-2 in bos taurus cow feces united states of america state of georgia post-weaning angus steer )2019-06-11v4No1 / 609
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 662
83amnoncommon bos taurus, rumen, holstein-friesian bull, ireland2017-03-05v4No1 / 757
157amnoncommon in naers of weened calves (common nasal cavity, bos taurus, calve, united states of america, juvenile organism, pair of nares)2017-07-04v4No1 / 766
466amnoncommon feces, bos taurus, cow, farm, united states of america, state of georgia2019-01-14v4No1 / 783
193amnonhigher in nares of people working in dairy farms ( high in bos taurus farm compared to control in homo sapiens united states of america pair of nares )2017-09-05v4No1 / 992
83amnon high in diet control normal diet compared to restricted diet in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1023
82amnoncommon in dairy cow rumen fluid (common bos taurus, sweden, rumen)2017-03-05v4No1 / 1322
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1329
83amnon high in restricted feed diet compared to control normal feed in bos taurus rumen holstein-friesian bull ireland 2017-03-05v4No1 / 1735

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