Summary for ontology term: brazil

Number of annotations with term: 86

Annotations:

common ontology terms
term enrichment score
TermScore
brazil0.962963
minas gerais state0.376812
campos rupestres0.376812
vellozia epidendroides0.218182
subgingival plaque0.192771
barbacenia macrantha0.188679
frog0.187500
mouth0.174757
pond0.152174
intestine0.140515
dentition0.136364
periodontitis0.131148
depth < 3mm0.104167
shallow pocket depth0.104167
adult0.089600
balb/c0.089552
dendropsophus minutus0.086957
lesser foam frog0.085106
leaf endosphere0.081633
cultivated environment0.078431
rhizosphere0.077562
stem0.072727
tadpole0.072727
leaf0.067227
root0.066225
deep pocket depth0.065217
depth > 3mm0.065217
digestive tract0.065217
soil0.063830
fish0.061538
skin0.061350
mucosa0.061224
digestive system0.058537
mouse0.056738
homo sapiens0.056643
plant0.054545
mus musculus0.051613
orchard0.044444
pulpitis0.044444
ph 4-60.044444
calophya0.044444
ph 3.50.044444
leptodactylus latrans0.044444
scinax perereca0.044444
stem endosphere0.044444
lithobates catesbeianus0.044444
lesser treefrog0.044444
rhinella icterica0.044444
yellow cururu toad0.044444
ranatra0.044444
water stick-insect0.044444
scinax fuscovarius0.044444
astyanax paranae0.044444
astyanax0.044444
poecilia reticulata0.044444
guppy0.044444
remartinia0.044444
aeshnidae0.044444
dragonfly0.044444
tooth0.044444
citrus0.043478
soybean0.043478
root endosphere0.043478
leaf surface0.043478
rana catesbeiana0.043478
bullfrog0.043478
toad0.043478
root canal0.043478
glycine max0.042553
pond water0.042553
LOWER IN periodontitis0.042105
rock0.041667
wild0.036364
state of florida0.035714
larval stage0.035714
fresh water0.032787
farm0.030769
caecum0.030769
control0.025575
LOWER IN depth > 3mm0.022727
LOWER IN deep pocket depth0.022727
LOWER IN shallow pocket depth0.022727
LOWER IN depth < 3mm0.022727
LOWER IN digestive tract0.022727
water0.022472
LOWER IN intestine0.022472
LOWER IN mucosa0.022472
systemic lupus erythematosus0.022472
LOWER IN systemic lupus erythematosus0.022472
LOWER IN control0.022430
LOWER IN root0.021053
LOWER IN rhizosphere0.020408
LOWER IN feces0.019802
research facility0.017964
feces0.016992
Fraction of dbbact annotations with this term covered by the query
TermScore
brazil0.928571
dendropsophus minutus0.666667
orchard0.500000
pulpitis0.500000
ph 4-60.500000
depth < 3mm0.500000
LOWER IN depth > 3mm0.500000
LOWER IN deep pocket depth0.500000
shallow pocket depth0.500000
deep pocket depth0.500000
depth > 3mm0.500000
LOWER IN shallow pocket depth0.500000
LOWER IN depth < 3mm0.500000
calophya0.500000
minas gerais state0.500000
campos rupestres0.500000
ph 3.50.500000
vellozia epidendroides0.500000
barbacenia macrantha0.500000
leptodactylus latrans0.500000
lesser foam frog0.500000
scinax perereca0.500000
stem endosphere0.500000
LOWER IN digestive tract0.500000
digestive tract0.500000
lithobates catesbeianus0.500000
lesser treefrog0.500000
rhinella icterica0.500000
yellow cururu toad0.500000
ranatra0.500000
water stick-insect0.500000
scinax fuscovarius0.500000
astyanax paranae0.500000
astyanax0.500000
poecilia reticulata0.500000
guppy0.500000
remartinia0.500000
aeshnidae0.500000
dragonfly0.500000
tooth0.500000
citrus0.333333
soybean0.333333
leaf endosphere0.333333
root endosphere0.333333
leaf surface0.333333
LOWER IN intestine0.333333
LOWER IN mucosa0.333333
rana catesbeiana0.333333
bullfrog0.333333
toad0.333333
root canal0.333333
systemic lupus erythematosus0.333333
LOWER IN systemic lupus erythematosus0.333333
frog0.285714
cultivated environment0.250000
glycine max0.250000
mucosa0.250000
pond water0.250000
periodontitis0.222222
LOWER IN periodontitis0.222222
subgingival plaque0.200000
rock0.200000
stem0.166667
tadpole0.166667
mouth0.150000
pond0.142857
dentition0.133333
plant0.125000
balb/c0.125000
intestine0.117647
LOWER IN root0.111111
fish0.090909
wild0.083333
LOWER IN rhizosphere0.083333
state of florida0.076923
root0.076923
larval stage0.076923
rhizosphere0.074074
LOWER IN feces0.066667
soil0.058824
fresh water0.055556
leaf0.052632
adult0.051948
farm0.045455
caecum0.045455
skin0.041667
mouse0.040816
digestive system0.037037
mus musculus0.035714
homo sapiens0.031847
water0.021739
LOWER IN control0.016529
control0.016393
research facility0.010309
feces0.009950
Fraction of annotations for the query sequences containing the term
TermScore
brazil1.000000
adult0.325581
minas gerais state0.302326
campos rupestres0.302326
homo sapiens0.255814
mouth0.209302
subgingival plaque0.186047
intestine0.174419
pond0.162791
dentition0.139535
vellozia epidendroides0.139535
frog0.139535
digestive system0.139535
barbacenia macrantha0.116279
skin0.116279
periodontitis0.093023
mouse0.093023
mus musculus0.093023
leaf0.093023
rhizosphere0.081395
soil0.069767
research facility0.069767
balb/c0.069767
depth < 3mm0.058140
shallow pocket depth0.058140
control0.058140
root0.058140
feces0.058140
cultivated environment0.046512
leaf endosphere0.046512
stem0.046512
lesser foam frog0.046512
dendropsophus minutus0.046512
tadpole0.046512
fish0.046512
deep pocket depth0.034884
depth > 3mm0.034884
LOWER IN control0.034884
plant0.034884
mucosa0.034884
digestive tract0.034884
citrus0.023256
orchard0.023256
pulpitis0.023256
farm0.023256
glycine max0.023256
soybean0.023256
ph 4-60.023256
LOWER IN periodontitis0.023256
calophya0.023256
state of florida0.023256
ph 3.50.023256
caecum0.023256
wild0.023256
rock0.023256
root endosphere0.023256
leptodactylus latrans0.023256
scinax perereca0.023256
leaf surface0.023256
stem endosphere0.023256
rana catesbeiana0.023256
lithobates catesbeianus0.023256
bullfrog0.023256
lesser treefrog0.023256
rhinella icterica0.023256
toad0.023256
yellow cururu toad0.023256
ranatra0.023256
water stick-insect0.023256
scinax fuscovarius0.023256
astyanax paranae0.023256
astyanax0.023256
water0.023256
pond water0.023256
fresh water0.023256
poecilia reticulata0.023256
guppy0.023256
remartinia0.023256
aeshnidae0.023256
dragonfly0.023256
larval stage0.023256
tooth0.023256
root canal0.023256
LOWER IN depth > 3mm0.011628
LOWER IN deep pocket depth0.011628
LOWER IN shallow pocket depth0.011628
LOWER IN depth < 3mm0.011628
LOWER IN rhizosphere0.011628
LOWER IN root0.011628
LOWER IN digestive tract0.011628
LOWER IN intestine0.011628
LOWER IN mucosa0.011628
LOWER IN feces0.011628
systemic lupus erythematosus0.011628
LOWER IN systemic lupus erythematosus0.011628
Exp. ID User ID Description Date Region Flag Sequences
97amnonhighfreq calophya, adult, brazil, state of florida2017-04-01v4No1 / 5
548amnonhighfreq minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 5
548amnonhighfreq minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 5
96amnon high in control compared to systemic lupus erythematosus in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 5
499amnonhighfreq digestive system, pond, intestine, brazil, remartinia, aeshnidae, dragonfly, larval stage2019-03-05v4No1 / 5
548amnonhigh freq in phosphorus impoverished soil (highfreq soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 6
548amnonhighfreq minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 6
548amnonhighfreq minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 6
378amnon high in periodontitis compared to control in homo sapiens brazil subgingival plaque dentition adult mouth 2018-09-14v4No1 / 7
415amnonhighfreq rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 8
474amnonhighfreq farm, soil, soybean, glycine max, ph 4-6, brazil, cultivated environment2019-01-16v4No1 / 8
378amnon high in control compared to periodontitis in homo sapiens brazil subgingival plaque dentition adult mouth 2018-09-14v4No1 / 10
548amnonhigh freq. in endopytic roots of Vellozia epidendroides (highfreq minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 11
499amnonhighfreq brazil, pond, digestive system, intestine, dendropsophus minutus, frog, tadpole2019-03-05v4No1 / 11
96amnon high in systemic lupus erythematosus compared to control in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 11
548amnonhighfreq minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf endosphere2019-08-17v4No1 / 12
328amnonhighfreq mouse, mus musculus, brazil, research facility, adult, balb/c, feces2018-04-30v4No1 / 12
492amnonhighfreq brazil, skin, frog, dendropsophus minutus, lesser treefrog, adult2019-02-27v4No1 / 13
97amnoncommon calophya, adult, brazil, state of florida2017-04-01v4No1 / 13
492amnonhighfreq brazil, skin, adult, lesser foam frog, scinax perereca, frog2019-02-27v4No1 / 13
499amnonhighfreq ranatra, water stick-insect, brazil, pond, digestive system, intestine2019-03-05v4No1 / 14
499amnonhighfreq brazil, pond, digestive system, intestine, scinax fuscovarius, frog, tadpole2019-03-05v4No1 / 14
499amnonhighfreq brazil, pond, digestive system, intestine, astyanax paranae, fish, astyanax2019-03-05v4No1 / 14
378amnonhighfreq homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, control, mouth2018-09-14v4No1 / 15
548amnonhighfreq minas gerais state, campos rupestres, brazil, barbacenia macrantha, stem, stem endosphere2019-08-17v4No1 / 15
328amnonhighfreq mouse, mus musculus, brazil, research facility, adult, balb/c, intestine, mucosa, digestive tract2018-04-30v4No1 / 15
548amnonhigh freq. in leaf surface of barbacenia macrantha (highfreq minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf surface)2019-08-17v4No1 / 16
492amnonhighfreq skin, adult, rana catesbeiana, lithobates catesbeianus, bullfrog, brazil, frog2019-02-27v4No1 / 16
499amnonhighfreq brazil, pond, water, pond water, fresh water2019-03-05v4No1 / 16
386amnonhighfreq mouse, mus musculus, caecum, wild, brazil2018-10-28v4No1 / 17
548amnonhighfreq minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf, leaf endosphere2019-08-17v4No1 / 17
492amnonhighfreq brazil, skin, adult, leptodactylus latrans, frog, lesser foam frog2019-02-27v4No1 / 17
499amnonhighfreq brazil, pond, poecilia reticulata, digestive system, intestine, fish, guppy2019-03-05v4No1 / 17
548amnonhigh freq. on leaf surface (highfreq minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf)2019-08-17v4No1 / 18
492amnonhighfreq brazil, skin, adult, rhinella icterica, toad, yellow cururu toad2019-02-27v4No1 / 18
95amnonhigh freq. in root canal (highfreq homo sapiens, brazil, tooth, root canal)2017-03-12v4No1 / 18
105amnonhighfreq brazil, homo sapiens, dentition, pulpitis, mouth2017-04-05v4No1 / 20
328amnonlower in feces compared to intestinal mucosa in mice ( high in mucosa intestine digestive tract compared to feces in mouse mus musculus brazil research facility adult balb/c )2018-04-30v4No1 / 20
548amnonhighfreq minas gerais state, campos rupestres, brazil, vellozia epidendroides, stem2019-08-17v4No1 / 21
378amnonhighfreq homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, periodontitis, mouth2018-09-14v4No1 / 22
96amnonhighfreq homo sapiens, subgingival plaque, brazil, mouth2017-03-29v4No1 / 22
120amnonhighfreq homo sapiens, feces, brazil2017-04-12v4No1 / 22
492amnoncommon skin, adult, brazil, rana catesbeiana, bullfrog, lithobates catesbeianus, frog2019-02-27v4No1 / 23
378amnonhighfreq homo sapiens, brazil, subgingival plaque, dentition, adult, depth > 3mm, deep pocket depth, periodontitis, mouth2018-09-14v4No1 / 24
96amnon high in control compared to periodontitis in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 24
499amnoncommon ranatra, water stick-insect, brazil, pond, digestive system, intestine2019-03-05v4No1 / 26
378amnon high in depth < 3mm shallow pocket depth compared to depth > 3mm deep pocket depth in homo sapiens brazil subgingival plaque dentition adult periodontitis mouth 2018-09-13v4No1 / 28
492amnoncommon brazil, skin, adult, lesser foam frog, scinax perereca, frog2019-02-27v4No1 / 30
492amnoncommon brazil, skin, frog, dendropsophus minutus, lesser treefrog, adult2019-02-27v4No1 / 31
492amnoncommon brazil, skin, adult, leptodactylus latrans, frog, lesser foam frog2019-02-27v4No1 / 34
378amnon high in deep pocket depth depth > 3mm compared to shallow pocket depth depth < 3mm in homo sapiens brazil subgingival plaque dentition adult periodontitis mouth 2018-09-13v4No1 / 40
95amnoncommon in root canal (common homo sapiens, brazil, tooth, root canal)2017-03-12v4No1 / 42
96amnon high in periodontitis compared to control in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 48
378amnoncommon homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, control, mouth2018-09-14v4No1 / 69
378amnoncommon homo sapiens, brazil, subgingival plaque, dentition, adult, depth > 3mm, deep pocket depth, periodontitis, mouth2018-09-14v4No1 / 80
378amnoncommon homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, periodontitis, mouth2018-09-14v4No1 / 84
328amnonhigher in feces compared to intestinal mucosa in mice ( high in feces compared to digestive tract intestine mucosa in mouse mus musculus brazil research facility adult balb/c )2018-04-30v4No1 / 94
492amnoncommon brazil, skin, adult, rhinella icterica, toad, yellow cururu toad2019-02-27v4No1 / 95
105amnoncommon brazil, homo sapiens, dentition, pulpitis, mouth2017-04-05v4No1 / 100
548amnon high in plant root compared to rhizosphere in minas gerais state campos rupestres brazil vellozia epidendroides 2019-08-15v4No1 / 100
499amnoncommon brazil, pond, digestive system, intestine, dendropsophus minutus, frog, tadpole2019-03-05v4No1 / 102
499amnoncommon digestive system, pond, intestine, brazil, remartinia, aeshnidae, dragonfly, larval stage2019-03-05v4No1 / 104
328amnoncommon mouse, mus musculus, brazil, research facility, adult, balb/c, intestine, mucosa, digestive tract2018-04-30v4No1 / 109
328amnoncommon mouse, mus musculus, brazil, research facility, adult, balb/c, feces2018-04-30v4No1 / 116
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, stem, stem endosphere2019-08-17v4No1 / 123
96amnoncommon homo sapiens, subgingival plaque, brazil, mouth2017-03-29v4No1 / 158
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf endosphere2019-08-17v4No1 / 164
499amnoncommon brazil, pond, digestive system, intestine, scinax fuscovarius, frog, tadpole2019-03-05v4No1 / 176
386amnoncommon mouse, mus musculus, caecum, wild, brazil2018-10-28v4No1 / 189
548amnon high in rhizosphere compared to root in minas gerais state campos rupestres brazil vellozia epidendroides 2019-08-15v4No1 / 197
120amnoncommon homo sapiens, feces, brazil2017-04-12v4No1 / 208
499amnoncommon brazil, pond, water, pond water, fresh water2019-03-05v4No1 / 228
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf, leaf endosphere2019-08-17v4No1 / 243
499amnoncommon brazil, pond, digestive system, intestine, astyanax paranae, fish, astyanax2019-03-05v4No1 / 273
499amnoncommon brazil, pond, poecilia reticulata, digestive system, intestine, fish, guppy2019-03-05v4No1 / 308
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, stem2019-08-17v4No1 / 431
548amnoncommon on leaf surface (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf)2019-08-17v4No1 / 548
548amnoncommon in leaf surface of barbacenia macrantha (common minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf surface)2019-08-17v4No1 / 550
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 651
548amnoncommon in endopytic roots of Vellozia epidendroides (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 800
548amnoncommon minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 924
474amnoncommon soil, farm, glycine max, soybean, ph 4-6, brazil, cultivated environment2019-01-16v4No1 / 974
548amnoncommon minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 1040
415amnoncommon rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 1091
548amnoncommon in phosphorus impoverished soil (common soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 1483

Problems / suggestions? Please email info AT dbbact DOT org