Summary for ontology term: brazil

Number of annotations with term: 106

Annotations:

common ontology terms
term enrichment score
TermScore
brazil0.965517
minas gerais state0.329114
campos rupestres0.329114
campinas0.273973
greenhouse0.240964
saccharum0.225000
sugarcane0.225000
pond0.208955
vellozia epidendroides0.184615
subgingival plaque0.172043
barbacenia macrantha0.158730
frog0.155844
mouth0.155172
stem0.119403
intestine0.117188
leaf endosphere0.116667
leaf0.113821
periodontitis0.112676
endosphere0.110236
dentition0.109091
exosphere0.101695
rhizosphere0.096916
root0.096386
leaf surface0.086207
depth < 3mm0.086207
shallow pocket depth0.086207
balb/c0.077922
soil0.072654
dendropsophus minutus0.071429
upper stem0.070175
lesser foam frog0.070175
cultivated environment0.065574
adult0.064442
tadpole0.061538
stem endosphere0.054299
digestive system0.054299
stem surface0.053571
deep pocket depth0.053571
depth > 3mm0.053571
digestive tract0.053571
mouse0.050955
mucosa0.050847
skin0.050505
fish0.049383
LOWER IN rhizosphere0.047244
mus musculus0.046784
plant0.046154
homo sapiens0.045852
orchard0.036364
pulpitis0.036364
LOWER IN upper stem0.036364
calophya0.036364
leptodactylus latrans0.036364
ph 3.50.036364
scinax perereca0.036364
lithobates catesbeianus0.036364
lesser treefrog0.036364
rhinella icterica0.036364
yellow cururu toad0.036364
ranatra0.036364
water stick-insect0.036364
scinax fuscovarius0.036364
astyanax paranae0.036364
astyanax0.036364
poecilia reticulata0.036364
guppy0.036364
remartinia0.036364
aeshnidae0.036364
dragonfly0.036364
tooth0.036364
citrus0.035714
soybean0.035714
ph 4-60.035714
LOWER IN stem0.035714
rana catesbeiana0.035714
bullfrog0.035714
toad0.035714
root canal0.035714
glycine max0.035088
caecum0.035088
root endosphere0.035088
LOWER IN periodontitis0.034783
rock0.034483
pond water0.034483
LOWER IN root0.034188
LOWER IN leaf0.033333
larval stage0.030303
state of florida0.029412
wild0.028169
fresh water0.027778
farm0.024691
control0.021459
water0.019048
LOWER IN control0.018721
LOWER IN leaf endosphere0.018519
LOWER IN endosphere0.018519
LOWER IN stem surface0.018519
LOWER IN depth &gt; 3mm0.018519
LOWER IN deep pocket depth0.018519
LOWER IN shallow pocket depth0.018519
Fraction of dbbact annotations with this term covered by the query
TermScore
brazil0.933333
stem endosphere0.666667
dendropsophus minutus0.666667
orchard0.500000
LOWER IN leaf endosphere0.500000
upper stem0.500000
campinas0.500000
LOWER IN endosphere0.500000
exosphere0.500000
leaf surface0.500000
pulpitis0.500000
stem surface0.500000
LOWER IN stem surface0.500000
LOWER IN upper stem0.500000
leaf endosphere0.500000
depth < 3mm0.500000
LOWER IN depth &gt; 3mm0.500000
LOWER IN deep pocket depth0.500000
shallow pocket depth0.500000
deep pocket depth0.500000
depth > 3mm0.500000
LOWER IN shallow pocket depth0.500000
LOWER IN depth &lt; 3mm0.500000
LOWER IN stem endosphere0.500000
calophya0.500000
leptodactylus latrans0.500000
lesser foam frog0.500000
minas gerais state0.500000
campos rupestres0.500000
ph 3.50.500000
vellozia epidendroides0.500000
barbacenia macrantha0.500000
scinax perereca0.500000
LOWER IN digestive tract0.500000
digestive tract0.500000
lithobates catesbeianus0.500000
lesser treefrog0.500000
rhinella icterica0.500000
yellow cururu toad0.500000
ranatra0.500000
water stick-insect0.500000
pond0.500000
scinax fuscovarius0.500000
astyanax paranae0.500000
astyanax0.500000
poecilia reticulata0.500000
guppy0.500000
remartinia0.500000
aeshnidae0.500000
dragonfly0.500000
tooth0.500000
citrus0.333333
endosphere0.333333
saccharum0.333333
sugarcane0.333333
greenhouse0.333333
soybean0.333333
ph 4-60.333333
LOWER IN leaf surface0.333333
LOWER IN stem0.333333
LOWER IN mucosa0.333333
rana catesbeiana0.333333
bullfrog0.333333
toad0.333333
root canal0.333333
systemic lupus erythematosus0.333333
LOWER IN systemic lupus erythematosus0.333333
stem0.285714
cultivated environment0.250000
glycine max0.250000
frog0.250000
caecum0.250000
root endosphere0.250000
LOWER IN intestine0.250000
mucosa0.250000
periodontitis0.222222
LOWER IN periodontitis0.222222
subgingival plaque0.200000
rock0.200000
pond water0.200000
LOWER IN root0.181818
tadpole0.166667
LOWER IN leaf0.142857
LOWER IN rhizosphere0.142857
mouth0.142857
root0.133333
plant0.125000
balb/c0.125000
dentition0.105263
leaf0.100000
intestine0.100000
rhizosphere0.090909
LOWER IN soil0.083333
larval stage0.076923
fish0.071429
state of florida0.066667
soil0.063492
wild0.055556
LOWER IN feces0.055556
fresh water0.052632
Fraction of annotations for the query sequences containing the term
TermScore
brazil1.000000
adult0.264151
minas gerais state0.245283
campos rupestres0.245283
homo sapiens0.207547
campinas0.188679
greenhouse0.188679
saccharum0.169811
sugarcane0.169811
mouth0.169811
subgingival plaque0.150943
intestine0.141509
leaf0.132075
pond0.132075
dentition0.113208
frog0.113208
vellozia epidendroides0.113208
digestive system0.113208
rhizosphere0.103774
skin0.094340
barbacenia macrantha0.094340
soil0.084906
stem0.075472
root0.075472
periodontitis0.075472
mouse0.075472
mus musculus0.075472
endosphere0.066038
leaf endosphere0.066038
exosphere0.056604
research facility0.056604
balb/c0.056604
leaf surface0.047170
depth < 3mm0.047170
shallow pocket depth0.047170
control0.047170
feces0.047170
cultivated environment0.037736
upper stem0.037736
lesser foam frog0.037736
dendropsophus minutus0.037736
tadpole0.037736
fish0.037736
stem endosphere0.028302
LOWER IN rhizosphere0.028302
stem surface0.028302
deep pocket depth0.028302
depth > 3mm0.028302
LOWER IN control0.028302
plant0.028302
mucosa0.028302
digestive tract0.028302
citrus0.018868
orchard0.018868
LOWER IN leaf0.018868
LOWER IN root0.018868
pulpitis0.018868
farm0.018868
glycine max0.018868
soybean0.018868
ph 4-60.018868
LOWER IN upper stem0.018868
LOWER IN stem0.018868
LOWER IN periodontitis0.018868
calophya0.018868
state of florida0.018868
leptodactylus latrans0.018868
ph 3.50.018868
caecum0.018868
wild0.018868
rock0.018868
root endosphere0.018868
scinax perereca0.018868
rana catesbeiana0.018868
lithobates catesbeianus0.018868
bullfrog0.018868
lesser treefrog0.018868
rhinella icterica0.018868
toad0.018868
yellow cururu toad0.018868
ranatra0.018868
water stick-insect0.018868
scinax fuscovarius0.018868
astyanax paranae0.018868
astyanax0.018868
water0.018868
pond water0.018868
fresh water0.018868
poecilia reticulata0.018868
guppy0.018868
remartinia0.018868
aeshnidae0.018868
dragonfly0.018868
larval stage0.018868
tooth0.018868
root canal0.018868
LOWER IN leaf endosphere0.009434
LOWER IN endosphere0.009434
LOWER IN soil0.009434
LOWER IN leaf surface0.009434
Exp. ID User ID Description Date Region Flag Sequences
615amnondominant saccharum, sugarcane, rhizosphere, campinas, brazil, greenhouse2020-04-27v4No1 / 3
97amnondominant calophya, adult, brazil, state of florida2017-04-01v4No1 / 5
548amnondominant minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 5
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 5
96amnon high in control compared to systemic lupus erythematosus in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 5
499amnondominant digestive system, pond, intestine, brazil, remartinia, aeshnidae, dragonfly, larval stage2019-03-05v4No1 / 5
615amnondominant endosphere, root, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 6
548amnonhigh freq in phosphorus impoverished soil (dominant soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 6
548amnondominant minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 6
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 6
378amnon high in periodontitis compared to control in homo sapiens brazil subgingival plaque dentition adult mouth 2018-09-14v4No1 / 7
415amnondominant rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 8
474amnondominant farm, soil, soybean, glycine max, ph 4-6, brazil, cultivated environment2019-01-16v4No1 / 8
615amnondominant in control soil with no sugarcane (dominant campinas, brazil, greenhouse, soil)2020-04-27v4No1 / 8
378amnon high in control compared to periodontitis in homo sapiens brazil subgingival plaque dentition adult mouth 2018-09-14v4No1 / 10
548amnonhigh freq. in endopytic roots of Vellozia epidendroides (dominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 11
499amnondominant brazil, pond, digestive system, intestine, dendropsophus minutus, frog, tadpole2019-03-05v4No1 / 11
96amnon high in systemic lupus erythematosus compared to control in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 11
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf endosphere2019-08-17v4No1 / 12
328amnondominant mouse, mus musculus, brazil, research facility, adult, balb/c, feces2018-04-30v4No1 / 12
492amnondominant brazil, skin, adult, lesser foam frog, scinax perereca, frog2019-02-27v4No1 / 13
492amnondominant brazil, skin, frog, dendropsophus minutus, lesser treefrog, adult2019-02-27v4No1 / 13
97amnoncommon calophya, adult, brazil, state of florida2017-04-01v4No1 / 13
615amnondominant leaf endosphere, leaf, endosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 13
499amnondominant ranatra, water stick-insect, brazil, pond, digestive system, intestine2019-03-05v4No1 / 14
499amnondominant brazil, pond, digestive system, intestine, scinax fuscovarius, frog, tadpole2019-03-05v4No1 / 14
499amnondominant brazil, pond, digestive system, intestine, astyanax paranae, fish, astyanax2019-03-05v4No1 / 14
378amnondominant homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, control, mouth2018-09-14v4No1 / 15
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, stem, stem endosphere2019-08-17v4No1 / 15
328amnondominant mouse, mus musculus, brazil, research facility, adult, balb/c, intestine, mucosa, digestive tract2018-04-30v4No1 / 15
548amnonhigh freq. in leaf surface of barbacenia macrantha (dominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf surface)2019-08-17v4No1 / 16
492amnondominant skin, adult, rana catesbeiana, lithobates catesbeianus, bullfrog, brazil, frog2019-02-27v4No1 / 16
499amnondominant brazil, pond, water, pond water, fresh water2019-03-05v4No1 / 16
386amnondominant mouse, mus musculus, caecum, wild, brazil2018-10-28v4No1 / 17
548amnondominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf, leaf endosphere2019-08-17v4No1 / 17
492amnondominant brazil, skin, adult, leptodactylus latrans, frog, lesser foam frog2019-02-27v4No1 / 17
499amnondominant brazil, pond, poecilia reticulata, digestive system, intestine, fish, guppy2019-03-05v4No1 / 17
615amnondominant stem surface, upper stem, stem, exosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 18
548amnonhigh freq. on leaf surface (dominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf)2019-08-17v4No1 / 18
492amnondominant brazil, skin, adult, rhinella icterica, toad, yellow cururu toad2019-02-27v4No1 / 18
95amnonhigh freq. in root canal (dominant homo sapiens, brazil, tooth, root canal)2017-03-12v4No1 / 18
615amnondominant exosphere, leaf surface, leaf, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 19
105amnondominant brazil, homo sapiens, dentition, pulpitis, mouth2017-04-05v4No1 / 20
328amnonlower in feces compared to intestinal mucosa in mice ( high in mucosa intestine digestive tract compared to feces in mouse mus musculus brazil research facility adult balb/c )2018-04-30v4No1 / 20
548amnondominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, stem2019-08-17v4No1 / 21
378amnondominant homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, periodontitis, mouth2018-09-14v4No1 / 22
96amnondominant homo sapiens, subgingival plaque, brazil, mouth2017-03-29v4No1 / 22
120amnondominant homo sapiens, feces, brazil2017-04-12v4No1 / 22
492amnoncommon skin, adult, brazil, rana catesbeiana, bullfrog, lithobates catesbeianus, frog2019-02-27v4No1 / 23
378amnondominant homo sapiens, brazil, subgingival plaque, dentition, adult, depth > 3mm, deep pocket depth, periodontitis, mouth2018-09-14v4No1 / 24
96amnon high in control compared to periodontitis in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 24
499amnoncommon ranatra, water stick-insect, brazil, pond, digestive system, intestine2019-03-05v4No1 / 26
378amnon high in depth < 3mm shallow pocket depth compared to depth > 3mm deep pocket depth in homo sapiens brazil subgingival plaque dentition adult periodontitis mouth 2018-09-13v4No1 / 28
492amnoncommon brazil, skin, adult, lesser foam frog, scinax perereca, frog2019-02-27v4No1 / 30
492amnoncommon brazil, skin, frog, dendropsophus minutus, lesser treefrog, adult2019-02-27v4No1 / 31
492amnoncommon brazil, skin, adult, leptodactylus latrans, frog, lesser foam frog2019-02-27v4No1 / 34
378amnon high in deep pocket depth depth > 3mm compared to shallow pocket depth depth < 3mm in homo sapiens brazil subgingival plaque dentition adult periodontitis mouth 2018-09-13v4No1 / 40
95amnoncommon in root canal (common homo sapiens, brazil, tooth, root canal)2017-03-12v4No1 / 42
96amnon high in periodontitis compared to control in homo sapiens subgingival plaque brazil mouth 2017-03-29v4No1 / 48
378amnoncommon homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, control, mouth2018-09-14v4No1 / 69
378amnoncommon homo sapiens, brazil, subgingival plaque, dentition, adult, depth > 3mm, deep pocket depth, periodontitis, mouth2018-09-14v4No1 / 80
378amnoncommon homo sapiens, brazil, subgingival plaque, dentition, adult, shallow pocket depth, depth < 3mm, periodontitis, mouth2018-09-14v4No1 / 84
328amnonhigher in feces compared to intestinal mucosa in mice ( high in feces compared to digestive tract intestine mucosa in mouse mus musculus brazil research facility adult balb/c )2018-04-30v4No1 / 94
492amnoncommon brazil, skin, adult, rhinella icterica, toad, yellow cururu toad2019-02-27v4No1 / 95
105amnoncommon brazil, homo sapiens, dentition, pulpitis, mouth2017-04-05v4No1 / 100
548amnon high in plant root compared to rhizosphere in minas gerais state campos rupestres brazil vellozia epidendroides 2019-08-15v4No1 / 100
499amnoncommon brazil, pond, digestive system, intestine, dendropsophus minutus, frog, tadpole2019-03-05v4No1 / 102
499amnoncommon digestive system, pond, intestine, brazil, remartinia, aeshnidae, dragonfly, larval stage2019-03-05v4No1 / 104
328amnoncommon mouse, mus musculus, brazil, research facility, adult, balb/c, intestine, mucosa, digestive tract2018-04-30v4No1 / 109
328amnoncommon mouse, mus musculus, brazil, research facility, adult, balb/c, feces2018-04-30v4No1 / 116
615amnon high in leaf endosphere leaf compared to upper stem stem endosphere stem in endosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 118
615amnoncommon leaf endosphere, leaf, endosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 122
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, stem, stem endosphere2019-08-17v4No1 / 123
615amnoncommon stem surface, upper stem, stem, exosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 129
615amnoncommon exosphere, leaf surface, leaf, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 143
615amnon high in stem surface upper stem stem compared to leaf surface leaf in exosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 143
615amnon high in stem endosphere upper stem stem compared to leaf endosphere leaf in endosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 153
96amnoncommon homo sapiens, subgingival plaque, brazil, mouth2017-03-29v4No1 / 158
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf endosphere2019-08-17v4No1 / 164
499amnoncommon brazil, pond, digestive system, intestine, scinax fuscovarius, frog, tadpole2019-03-05v4No1 / 176
386amnoncommon mouse, mus musculus, caecum, wild, brazil2018-10-28v4No1 / 189
548amnon high in rhizosphere compared to root in minas gerais state campos rupestres brazil vellozia epidendroides 2019-08-15v4No1 / 197
120amnoncommon homo sapiens, feces, brazil2017-04-12v4No1 / 208
499amnoncommon brazil, pond, water, pond water, fresh water2019-03-05v4No1 / 228
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf, leaf endosphere2019-08-17v4No1 / 243
499amnoncommon brazil, pond, digestive system, intestine, astyanax paranae, fish, astyanax2019-03-05v4No1 / 273
615amnon high in soil compared to rhizosphere in saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 306
499amnoncommon brazil, pond, poecilia reticulata, digestive system, intestine, fish, guppy2019-03-05v4No1 / 308
615amnon high in leaf surface leaf compared to stem surface upper stem stem in exosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 321
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, stem2019-08-17v4No1 / 431
615amnon high in endosphere root compared to rhizosphere in saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 529
548amnoncommon on leaf surface (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf)2019-08-17v4No1 / 548
548amnoncommon in leaf surface of barbacenia macrantha (common minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf surface)2019-08-17v4No1 / 550
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 651
615amnoncommon endosphere, root, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 776
615amnoncommon in control soil with no sugarcane (common campinas, brazil, greenhouse, soil)2020-04-27v4No1 / 780
548amnoncommon in endopytic roots of Vellozia epidendroides (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 800
615amnon high in rhizosphere compared to endosphere root in saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 913
548amnoncommon minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 924
474amnoncommon soil, farm, glycine max, soybean, ph 4-6, brazil, cultivated environment2019-01-16v4No1 / 974
615amnoncommon saccharum, sugarcane, rhizosphere, campinas, brazil, greenhouse2020-04-27v4No1 / 974
548amnoncommon minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 1040
415amnoncommon rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 1091
615amnon high in rhizosphere compared to soil in saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 1181
548amnoncommon in phosphorus impoverished soil (common soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 1483

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