Summary for ontology term: broiler chicken

Number of annotations with term: 26

Annotations:

common ontology terms
term enrichment score
TermScore
broiler chicken0.875912
chicken0.476190
gallus gallus0.476190
age 2 weeks0.235294
age 4 weeks0.222222
age 5 weeks0.187500
hawaii0.173913
viet nam0.171429
caecum0.154341
austria0.148148
LOWER IN broiler chicken0.137931
thailand0.136364
age 3 days0.133333
lethbridge0.133333
age 35 days0.125000
age 3 weeks0.125000
age 6 weeks0.111111
farm0.103321
kingdom of spain0.088496
captive0.077922
LOWER IN age 5 weeks0.071429
feral0.071429
age 15-20 weeks0.071429
LOWER IN free range chicken0.071429
free range chicken0.071429
LOWER IN viet nam0.071429
LOWER IN feral0.071429
LOWER IN age 15-20 weeks0.071429
LOWER IN thailand0.068966
LOWER IN research facility0.060606
LOWER IN captive0.060606
canada0.058824
LOWER IN wild0.051282
wild0.040000
research facility0.026076
feces0.012979
Fraction of dbbact annotations with this term covered by the query
TermScore
broiler chicken0.833333
LOWER IN broiler chicken0.666667
LOWER IN age 5 weeks0.500000
feral0.500000
age 15-20 weeks0.500000
age 5 weeks0.500000
age 3 days0.500000
age 2 weeks0.500000
lethbridge0.500000
LOWER IN free range chicken0.500000
free range chicken0.500000
LOWER IN viet nam0.500000
LOWER IN feral0.500000
LOWER IN age 15-20 weeks0.500000
age 4 weeks0.400000
age 35 days0.333333
age 3 weeks0.333333
viet nam0.333333
LOWER IN thailand0.333333
chicken0.312500
gallus gallus0.312500
hawaii0.200000
age 6 weeks0.200000
thailand0.166667
LOWER IN research facility0.142857
LOWER IN captive0.142857
austria0.142857
caecum0.088235
LOWER IN wild0.076923
captive0.058824
farm0.057143
kingdom of spain0.050000
canada0.047619
wild0.041667
research facility0.013986
feces0.006601
Fraction of annotations for the query sequences containing the term
TermScore
chicken1.000000
gallus gallus1.000000
broiler chicken0.923077
caecum0.615385
farm0.538462
kingdom of spain0.384615
feces0.384615
research facility0.192308
hawaii0.153846
age 2 weeks0.153846
age 4 weeks0.153846
austria0.153846
captive0.115385
age 5 weeks0.115385
viet nam0.115385
thailand0.115385
LOWER IN broiler chicken0.076923
age 3 days0.076923
age 6 weeks0.076923
lethbridge0.076923
age 35 days0.076923
canada0.076923
age 3 weeks0.076923
LOWER IN age 5 weeks0.038462
feral0.038462
wild0.038462
age 15-20 weeks0.038462
LOWER IN research facility0.038462
LOWER IN captive0.038462
LOWER IN free range chicken0.038462
free range chicken0.038462
LOWER IN thailand0.038462
LOWER IN viet nam0.038462
LOWER IN wild0.038462
LOWER IN feral0.038462
LOWER IN age 15-20 weeks0.038462
Exp. ID User ID Description Date Region Flag Sequences
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, age 3 days, kingdom of spain, farm2019-03-03v4No1 / 4
495amnondominant gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 6 weeks2019-03-03v4No1 / 6
497amnondominant chicken, gallus gallus, broiler chicken, austria, farm, feces, age 2 weeks2019-03-04v4No1 / 9
497amnondominant chicken, gallus gallus, broiler chicken, austria, farm, feces, age 4 weeks2019-03-04v4No1 / 10
495amnondominant gallus gallus, chicken, caecum, broiler chicken, age 3 days, kingdom of spain, farm2019-03-03v4No1 / 12
568amnondominant gallus gallus, chicken, feces, broiler chicken, viet nam2019-12-08v3No1 / 15
776amnondominant caecum, broiler chicken, research facility, captive, age 5 weeks, gallus gallus, chicken, hawaii2021-04-25v3No1 / 17
495amnondominant gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 4 weeks2019-03-03v4No1 / 19
497amnoncommon chicken, gallus gallus, broiler chicken, austria, farm, feces, age 4 weeks2019-03-04v4No1 / 21
568amnondominant gallus gallus, chicken, feces, broiler chicken, thailand2019-12-08v3No1 / 23
756amnondominant caecum, lethbridge, age 35 days, canada, broiler chicken, research facility, gallus gallus, chicken2021-03-22v4No1 / 24
495amnondominant gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 2 weeks2019-03-03v4No1 / 28
497amnoncommon chicken, gallus gallus, broiler chicken, austria, farm, feces, age 2 weeks2019-03-04v4No1 / 39
495amnon high in broiler chicken compared to free range chicken in gallus gallus chicken caecum kingdom of spain farm age 3 weeks 2019-03-03v4No1 / 90
776amnon high in feral wild age 15-20 weeks compared to age 5 weeks research facility broiler chicken captive in caecum hawaii chicken gallus gallus 2021-04-25v3No1 / 107
568amnon high in viet nam compared to thailand in gallus gallus chicken feces broiler chicken 2019-12-08v3No1 / 119
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 2 weeks2019-03-03v4No1 / 134
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 4 weeks2019-03-03v4No1 / 185
495amnon high in free range chicken compared to broiler chicken in gallus gallus chicken caecum kingdom of spain farm age 3 weeks 2019-03-03v4No1 / 199
568amnon high in thailand compared to viet nam in gallus gallus chicken feces broiler chicken 2019-12-08v3No1 / 206
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 6 weeks2019-03-03v4No1 / 210
776amnon high in broiler chicken captive research facility age 5 weeks compared to wild feral age 15-20 weeks in caecum gallus gallus chicken hawaii 2021-04-25v3No1 / 252
568amnoncommon gallus gallus, chicken, feces, broiler chicken, viet nam2019-12-08v3No1 / 272
568amnoncommon gallus gallus, chicken, feces, broiler chicken, thailand2019-12-08v3No1 / 320
756amnoncommon caecum, lethbridge, age 35 days, canada, broiler chicken, research facility, gallus gallus, chicken2021-03-22v4No1 / 321
776amnoncommon caecum, broiler chicken, research facility, captive, age 5 weeks, gallus gallus, chicken, hawaii2021-04-25v3No1 / 343

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