Summary for ontology term: caecum

Number of annotations with term: 235

Top positive-associated sequence

Taxonomy Sequence Recall
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGGTGGCATGGTAAGCCAGAAGTGAAAACCCGGGGCTCAACCCCGCGGATTGCTTTTGGAACTATCAGGCTGGAGTGCTGGAGGGGTAAGCGGAATTCCTA0.028708
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGGCGGTCTGACAAGTCAGAAGTGAAAGCCCGGGGCTCAACTCCGGGACTGCTTTTGAAACTGCCGGACTAGATTGCAGGAGAGGTAAGTGGAATTCCTAG0.028708
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGAGTGAAGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAAGAAAATGACGGTACCTGACTAAGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTA0.023923
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__Bacteroidaceae;g__BacteroidesTACGGAGGATCCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGAGCGTAGGTGGATTGTTAAGTCAGTTGTGAAAGTTTGCGGCTCAACCGTAAAATTGCAGTTGAAACTGGCAGTCTTGAGTACAGTAGAGGTGGGCGGAATTCGTGG0.023923
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTACGTAGGTGGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGTAGGCGGGGAGACAAGTTGAATGTCTAAACTATCGGCTTAACTGATAGTCGCGTTCAAAACTATCACTCTTGAGTGCAGTAGAGGTAGGCGGAATTCCTAGT0.023923
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTAGGCGGGATTGCAAGTCAGATGTGAAAACCACGGGCTCAACCTGTGGCCTGCATTTGAAACTGTAGTTCTTGAGTACTGGAGAGGCAGACGGAATTCCTAG0.023923
d__BacteriaTACGTAGGGGGCGAGCGTTGTCCGGAATGACTGGGCGTAAAGGGCGCGTAGGCGGCTGTGTAAGTCTGGAGTGAAAGTCCTGCTTTTAAGGTGGGAATTGCTTTGGAGACTGCATGGCTTGAGTGCGGAAGAGGCAAGTGGAATTCCCAG0.019139
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGAATATTGGGCAATGGGCGCAAGCCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCTTTCGGGTTGTAAACTTCTTTTGTCAGGGAAGATGAACAGACTGTACCTGACGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCGG0.019139
d__BacteriaGGGGGAATATTGGGCAATGGGGGAAACCCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCCTTCGGGTTGTAAACTTCTGTGACAGGGGACGAAGGAAGTGACGGTACCCTGAGAGGAAGCTCCGGCAAACTACGTGCCAGCAGCCGCG0.019139
d__BacteriaTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCAACGCCGCGTGAGGGAAGAAGGTTTTCGGATTGTAAACCTCTGTCCTTGGTGACGAAGGAAGTGACGGTAGCCAAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG0.019139

Top negative-associated sequence

Taxonomy Sequence Recall
d__BacteriaGACGGGGGGGGCAAGTGTTCTTCGGAATGACTGGGCGTAAAGGGCACGTAGGCGGTGAATCGGGTTGAAAGTGAAAGTCGCCAAAAAGTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCGTGTG0.280000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__StreptococcusTACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGT0.240000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__StreptococcusTACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTTGATAAGTCTGAAGTTAAAGGCTGTGGCTCAACCATAGTTCGCTTTGGAAACTGTCAAACTTGAGTGCAGAAGGGGAGAGTGGAATTCCATGT0.240000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__StaphylococcusTACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATG0.240000
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.240000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__StreptococcusTAGGGAATCTTCGGCAATGGGGGCAACCCTGACCGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTGTTGTAAGAGAAGAACGTGTGTGAGAGTGGAAAGTTCACACAGTGACGGTAACTTACCAGAAAGGGACGG0.200000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__RomboutsiaTACGTAGGGGGCTAGCGTTATCCGGAATTACTGGGCGTAAAGGGTGCGTAGGTGGTTTCTTAAGTCAGAGGTGAAAGGCTACGGCTCAACCGTAGTAAGCCTTTGAAACTGGGAAACTTGAGTGCAGGAGAGGAGAGTGGAATTCCTAGT0.200000
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__"Enterobacteriales";f__Enterobacteriaceae;g__Escherichia/ShigellaTACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCTGATACTGGCAAGCTTGAGTCTCGTAGAGGGGGGTAGAATTCCAGG0.200000
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__Pasteurellales;f__PasteurellaceaeTACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCAGGCGGTGACTTAAGTGAGGTGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATTTCATACTGGGTCGCTAGAGTACTTTAGGGAGGGGTAGAATTCCACG0.160000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillales_Incertae Sedis XI;g__GemellaTACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGTGGTTTAATAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGTTAAACTTGAGTGCAGGAGAGAAAAGTGGAATTCCTAG0.160000

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGACTTGCAAGTCTGAAGTGAAAGCCCGGGGCTCAACCCCGGGACTGCTTTGGAAACTGTAGGTCTAGAGTGCTGGAGAGGTAAGTGGAATTCCTAG0.213992
d__Bacteria;p__Firmicutes;c__Clostridia;o__ClostridialesTACGTAGGGAGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGCGCAGGCGGGCCGGCAAGTTGGGAGTGAAATCCGGGGGCTTAACCCCCGAACTGCTTTCAAAACTGCTGGTCTTGAGTGATGGAGAGGCAGGCGGAATTCCGTG0.209302
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGATAGGCAAGTCTGGAGTGAAAGCCCGGGGCTCAACCCCGGGACTGCTTTGGAAACTGTTTATCTAGAGTGCTGGAGAGGTAAGTGGAATTCCTAG0.209302
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__FaecalibacteriumAACGTAGGTCACGAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCAGGCGGGTATGCAAGTTGGGAGTGAAATACATGGGCTCAACCCATGAACTGCTCTCAAAACTGTGTATCTTGAGTAGTGCAGAGGTAGGCGGAATTCCCGG0.204082
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTACGTAGGTGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGCGTGTAGGCGGGATTGCAAGTCAGATGTGAAAACCACGGGCTCAACCTGTGGCCTGCATTTGAAACTGCAGTTCTTGAGTACTGGAGAGGCAGACGGAATTCCTAG0.201550
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__OscillibacterTACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGCAGCCGGGCCGGCAAGTCAGATGTGAAATCTGGAGGCTTAACCTCCAAACTGCATTTGAAACTGTTGGTCTTGAGTACCGGAGAGGTTATCGGAATTCCTTG0.192469
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGCGCGGCAAGTCTGAAGTGAAAGCCCGGGGCTTAACCCCGGGACTGCTTTGGAAACTGCCATGCTGGAGTGCTGGAGAGGTAAGTGGAATTCCTAG0.190871
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__RoseburiaTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGAGCGAAGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAAGAAACTGACGGTACCTGACTAAGAAGCACCGGCTAAATACGTGCCAGCAGCCGCGGTA0.179592
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGGTGGCATGGTAAGCCAGAAGTGAAAACCCGGGGCTCAACCCCGCGGATTGCTTTTGGAACTATCAGGCTGGAGTGCTGGAGGGGTAAGCGGAATTCCTA0.178439
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTATGGTGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGAGCAGCAAGTCTGGAGTGAAAACCCGGGGCTCAACCCCGGGACTGCTTTGGAAACTGTTGTTCTAGAGTGCTGGAGAGGTAAGTGGAATTCCTAG0.174274

Annotations:

common ontology terms
term enrichment score
TermScore
caecum0.976811
chicken0.476283
gallus gallus0.467015
research facility0.254267
cecal content0.227774
LOWER IN caecum0.179274
colon0.173554
mus musculus0.154039
sus scrofa0.136223
pig0.136223
state of texas0.136223
mouse0.130081
broiler chicken0.128423
oryctolagus cuniculus0.127208
male0.125000
canada0.118121
age 6 weeks0.103704
ileum0.100732
free range chicken0.099617
rat0.096677
ovis aries0.096220
hen0.094862
LOWER IN colon0.092002
united states of america0.089457
wild0.084507
rectum0.082941
age 5 weeks0.080000
LOWER IN ileum0.079121
united kingdom0.078978
province of alberta0.078431
hyplus rabbit0.078431
farm0.075778
juvenile0.075472
age 35 weeks0.075472
rattus norvegicus0.075235
control0.073620
rabbit0.072727
age 30 days0.072435
ascending colon0.071146
sprague dawley0.070175
rex rabbit0.064777
age 35 days0.064777
australia0.064343
age 9 months0.063745
kingdom of spain0.063128
age 4 weeks0.062745
LOWER IN control0.061567
male organism0.061538
c57bl/60.061538
china0.059506
ovariectomy0.057026
age 3 weeks0.056225
exclusive breastmilk diet0.056225
french republic0.054795
female0.051181
adelaide0.049793
western australia0.049793
state of wyoming0.048583
centrocercus urophasianus0.048583
greater sage-grouse0.048583
cobb broiler chicken0.048583
state of maryland0.048583
nile tilapia0.048583
quail0.048583
coturnix coturnix0.048583
age 38 weeks0.048583
LOWER IN duodenum0.048348
right colon0.048000
tibet autonomous region0.047431
fasting0.047431
oreochromis niloticus0.047431
gastrointestinal system0.046875
age 1 year0.046332
charles river laboratories0.046332
hawaii0.045283
switzerland0.041522
LOWER IN jejunum0.041451
sichuan province0.040678
mucosa0.040678
sheep0.040678
c57bl/6j0.040678
duodenum0.040650
age 1 week0.039216
bird0.038339
germany0.038095
digesta0.037037
jejunum0.033333
dairy0.032922
LOWER IN left colon0.032922
left colon0.032922
jinzhou city prefecture0.032922
children0.032922
salmonella enterica subsp. enterica serovar typhimurium0.032922
salmonellosis0.032922
great britain0.032922
liverpool0.032922
age 42 days0.032922
mongolian sheep0.032922
pika0.032389
LOWER IN fasting0.032389
Fraction of dbbact annotations with this term covered by the query
TermScore
colon3.000000
LOWER IN colon2.666667
caecum1.083333
crohn's disease1.000000
LOWER IN crohn's disease1.000000
adelaide1.000000
edmonton1.000000
canis latrans1.000000
western australia1.000000
cecal content0.833333
jejunum0.800000
LOWER IN jejunum0.800000
chicken0.750000
gallus gallus0.705882
LOWER IN age 5 weeks0.666667
age 5 weeks0.666667
age 30 days0.666667
rex rabbit0.666667
age 35 days0.666667
ovariectomy0.666667
hen0.666667
broiler chicken0.571429
ileum0.562500
LOWER IN ileum0.562500
age 15-20 weeks0.500000
feral0.500000
dairy0.500000
ruminant reticulum0.500000
omasum0.500000
LOWER IN ruminant reticulum0.500000
LOWER IN omasum0.500000
LOWER IN transverse colon0.500000
LOWER IN left colon0.500000
transverse colon0.500000
left colon0.500000
jinzhou city prefecture0.500000
children0.500000
LOWER IN tibetan pig0.500000
LOWER IN tibetan swine0.500000
tibetan pig0.500000
tibetan swine0.500000
LOWER IN bronchitis0.500000
LOWER IN infectious bronchitis virus0.500000
bronchitis0.500000
infectious bronchitis virus0.500000
age 9 months0.500000
lethbridge0.500000
ovariectomized female0.500000
LOWER IN ovariectomized female0.500000
age 3 days0.500000
meleagris gallopavo0.500000
wild turkey0.500000
free range chicken0.500000
age 4 days0.500000
age 3 weeks0.500000
age 12 weeks0.500000
LOWER IN typhlitis0.500000
typhlitis0.500000
LOWER IN free range chicken0.500000
state of wyoming0.500000
centrocercus urophasianus0.500000
greater sage-grouse0.500000
LOWER IN high wellfare feed0.500000
high wellfare feed0.500000
cobb broiler chicken0.500000
LOWER IN salmonellosis0.500000
LOWER IN salmonella enterica subsp. enterica serovar typhimurium0.500000
ascending colon0.500000
province of alberta0.500000
salmonella enterica subsp. enterica serovar typhimurium0.500000
salmonellosis0.500000
LOWER IN ascending colon0.500000
LOWER IN abomasum0.500000
abomasum0.500000
hyplus rabbit0.500000
exclusive breastmilk diet0.500000
LOWER IN soild food supplemented diet0.500000
LOWER IN solid food diet0.500000
soild food supplemented diet0.500000
solid food diet0.500000
LOWER IN exclusive breastmilk diet0.500000
LOWER IN every other day fasting0.500000
state of maryland0.500000
every other day fasting0.500000
great britain0.500000
liverpool0.500000
age 42 days0.500000
nile tilapia0.500000
quail0.500000
coturnix coturnix0.500000
mongolian sheep0.500000
high capacity running strain0.500000
LOWER IN low capacity running strain0.500000
age 38 weeks0.500000
low capacity running strain0.500000
LOWER IN high capacity running strain0.500000
LOWER IN exercise0.500000
exercise0.500000
interferon gamma knockout0.500000
glucose tolerance0.500000
Fraction of annotations for the query sequences containing the term
TermScore
caecum0.889362
research facility0.574468
gallus gallus0.348936
chicken0.348936
united states of america0.297872
mus musculus0.195745
mouse0.170213
cecal content0.131915
farm0.119149
LOWER IN caecum0.110638
china0.110638
male0.106383
sus scrofa0.093617
pig0.093617
canada0.093617
kingdom of spain0.093617
state of texas0.093617
colon0.089362
control0.085106
oryctolagus cuniculus0.076596
broiler chicken0.072340
feces0.072340
united kingdom0.072340
rat0.068085
wild0.063830
LOWER IN control0.063830
ovis aries0.059574
age 6 weeks0.059574
ileum0.055319
female0.055319
free range chicken0.055319
australia0.051064
hen0.051064
rattus norvegicus0.051064
rectum0.046809
LOWER IN colon0.046809
age 5 weeks0.042553
LOWER IN ileum0.042553
sprague dawley0.042553
male organism0.042553
province of alberta0.042553
french republic0.042553
rabbit0.042553
juvenile0.042553
hyplus rabbit0.042553
c57bl/60.042553
germany0.042553
age 35 weeks0.042553
age 30 days0.038298
ascending colon0.038298
rex rabbit0.034043
age 4 weeks0.034043
age 9 months0.034043
age 35 days0.034043
ovariectomy0.029787
age 3 weeks0.029787
exclusive breastmilk diet0.029787
hawaii0.025532
gastrointestinal system0.025532
LOWER IN duodenum0.025532
right colon0.025532
sichuan province0.025532
tibet autonomous region0.025532
adelaide0.025532
mucosa0.025532
age 1 year0.025532
sheep0.025532
western australia0.025532
state of wyoming0.025532
bird0.025532
centrocercus urophasianus0.025532
greater sage-grouse0.025532
switzerland0.025532
cobb broiler chicken0.025532
state of maryland0.025532
charles river laboratories0.025532
fasting0.025532
oreochromis niloticus0.025532
nile tilapia0.025532
quail0.025532
coturnix coturnix0.025532
age 38 weeks0.025532
c57bl/6j0.025532
duodenum0.021277
LOWER IN feces0.021277
LOWER IN jejunum0.021277
age 1 week0.021277
digesta0.021277
dairy0.017021
italy0.017021
obsolete_juvenile stage0.017021
jejunum0.017021
LOWER IN left colon0.017021
left colon0.017021
jinzhou city prefecture0.017021
homo sapiens0.017021
sigmoid colon0.017021
terminal ileum0.017021
biopsy0.017021
children0.017021
Exp. ID User ID Description Date Region Flag Sequences
14amnonhighest in the right colon ( high in right colon compared to caecum in united states of america gastrointestinal system mus musculus )2016-11-08v4No1 / 1
14amnonmuch higher in right and transverse colon compared to other GI tract ( high in transverse colon right colon compared to caecum left colon in united states of america gastrointestinal system mus musculus )2016-11-08v4No1 / 1
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to caecum duodenum jejunum left colon right colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 1
434amnon high in control diet compared to fructose diet fructose in feces research facility caecum rattus norvegicus sprague dawley switzerland rat 2018-12-20v4No1 / 1
124amnonhigher in interferon gamma knockout mice ( high in interferon gamma knockout compared to control united states of america in feces caecum mus musculus c57bl/6j mouse )2017-04-14v4No1 / 1
124amnonassociated with glucose tolerance (other feces, caecum, mus musculus, c57bl/6j, mouse, glucose tolerance)2017-04-14v4No1 / 1
604amnon high in bronchitis infectious bronchitis virus compared to control in research facility caecum gallus gallus chicken cecal content china 2020-04-06v3No1 / 2
186amnonlower in rats chronically infected with helminth ( high in control compared to parasitic helminthiasis infectious disease hymenolepis diminuta in united states of america research facility caecum sprague dawley rattus rat )2017-08-23v4No1 / 3
127amnonhigh in young (0-3 days) compared to old (28 day) chickens ( high in age young age compared to old age in united states of america caecum gallus gallus chicken )2017-04-14v4No1 / 3
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, broiler chicken, age 3 days2019-03-03v4No1 / 4
25amnon high in antibiotic compared to control in research facility caecum oryctolagus cuniculus rex rabbit sichuan province 2016-12-01v4No1 / 5
186amnonhigher in rats chronically infected with helminth ( high in parasitic helminthiasis infectious disease hymenolepis diminuta compared to control in united states of america research facility caecum sprague dawley rattus rat )2017-08-23v4No1 / 5
300amnon high in exercise high physical activity compared to sedentary low physical activity in united states of america female research facility caecum rattus norvegicus rat ovariectomy age 38 weeks low capacity running strain 2018-02-27v4No1 / 5
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, broiler chicken, age 6 weeks2019-03-03v4No1 / 6
632amnondominant united states of america, research facility, caecum, adult, equus caballus, state of texas, cecal content, horse2020-06-10v4No1 / 7
108amnondominant united states of america, research facility, caecum, oreochromis niloticus, state of texas, nile tilapia2017-04-07v4No1 / 9
905amnondominant research facility, caecum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v3No1 / 10
279amnondominant caecum, colon, ochotonidae, pika, china2018-01-24v4No1 / 10
808amnondominant research facility, caecum, gallus gallus, germany, digesta, chicken, age 35 weeks, hen2021-06-20v1No1 / 10
700amnon high in caecum compared to colon in control research facility sus scrofa belgium pig age 2 months 2028-04-01v3No1 / 10
386amnondominant caecum, mus musculus, bolivia, mouse, wild2018-10-28v4No1 / 11
264amnondominant research facility, caecum, oryctolagus cuniculus, rex rabbit, jiangsu province, china2017-12-11v4No1 / 11
808amnondominant research facility, mucosa, caecum, gallus gallus, germany, chicken, age 35 weeks, hen2021-06-20v1No1 / 11
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, broiler chicken, age 3 days2019-03-03v4No1 / 12
108amnoncommon united states of america, research facility, caecum, oreochromis niloticus, state of texas, nile tilapia2017-04-07v4No1 / 12
604amnondominant research facility, caecum, gallus gallus, chicken, cecal content, china2020-04-06v3No1 / 13
611amnon high in male compared to female in research facility caecum mus musculus mouse cecal content canada age 9 months 2020-04-21v4No1 / 13
108amnon high in colon compared to caecum in united states of america research facility mus musculus state of texas mouse 2017-04-07v4No1 / 13
111amnondominant rectum, caecum, colon, ileum, ovis aries, mongolian sheep, china2017-04-09v4No1 / 13
386amnondominant caecum, mus musculus, ecuador, mouse, wild2018-10-28v4No1 / 14
186amnondominant united states of america, research facility, caecum, sprague dawley, rattus, rat2017-08-23v4No1 / 14
622amnondominant research facility, caecum, gallus gallus, chicken, great britain, liverpool, age 42 days2020-05-08v4No1 / 14
456amnon high in tongue compared to caecum in united states of america female research facility mus musculus c57bl/6 mouse 2019-01-10v4No1 / 14
25amnon high in compared to in research facility caecum oryctolagus cuniculus rex rabbit sichuan province 2016-12-01v4No1 / 15
25amnon high in control compared to antibiotic in research facility caecum oryctolagus cuniculus rex rabbit sichuan province 2016-12-01v4No1 / 15
456amnondominant united states of america, female, research facility, caecum, mus musculus, c57bl/6, mouse2019-01-10v4No1 / 15
300amnondominant united states of america, female, research facility, caecum, rattus norvegicus, rat, ovariectomy, age 38 weeks2018-02-27v4No1 / 15
363amnondominant dairy, rectum, caecum, colon, ovis aries, italy, obsolete_juvenile stage, age 30 days2018-08-29v4No1 / 16
19amnonhigh freq in biopsies of children (IBD study) (dominant homo sapiens, united states of america, rectum, caecum, colon, sigmoid colon, terminal ileum, biopsy, children)2016-11-14v4No1 / 16
314amnondominant farm, caecum, tibet autonomous region, cecal content, tibetan pig, tibetan swine, china2018-04-10v4No1 / 16
604amnon high in control compared to bronchitis infectious bronchitis virus in research facility caecum gallus gallus chicken cecal content china 2020-04-06v3No1 / 16
904amnondominant research facility, caecum, gallus gallus, chicken, china, hen, jinghong-1, age 42 weeks2022-05-18v3No1 / 16
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, age 6 weeks, free range chicken2019-03-03v4No1 / 16
738amnon high in high wellfare feed compared to standard feed in caecum gallus gallus age 1 week chicken united kingdom 2021-01-30v3No1 / 16
434amnon high in fructose diet fructose compared to control diet in feces research facility caecum rattus norvegicus sprague dawley switzerland rat 2018-12-20v4No1 / 16
776amnondominant research facility, caecum, gallus gallus, hawaii, chicken, captive, broiler chicken, age 5 weeks2021-04-25v3No1 / 17
897amnondominant research facility, caecum, gallus gallus, male, australia, chicken, age 4 weeks, broiler chicken, adelaide2022-04-18v3No1 / 17
897amnondominant research facility, caecum, gallus gallus, male, australia, chicken, age 4 weeks, adelaide, layer chicken, isa brown2022-04-18v3No1 / 17
386amnondominant caecum, mus musculus, brazil, mouse, wild2018-10-28v4No1 / 17
611amnondominant research facility, caecum, mus musculus, mouse, cecal content, canada, age 9 months2020-04-21v4No1 / 17
673amnondominant research facility, caecum, sus scrofa, male, canada, pig, age 6 weeks, ascending colon, male organism, salmonella enterica subsp. enterica serovar typhimurium, salmonellosis, province of alberta2020-09-28v4No1 / 17
108amnonincreases during fasting in nile tilapia caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum oreochromis niloticus state of texas nile tilapia )2017-04-07v4No1 / 17
300amnon high in sedentary low physical activity compared to exercise high physical activity in united states of america female research facility caecum rattus norvegicus rat ovariectomy age 38 weeks low capacity running strain 2018-02-27v4No1 / 17
780amnondominant research facility, caecum, gallus gallus, chicken, china, jinzhou city prefecture2021-04-28v3No1 / 18
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, free range chicken, age 8 weeks2019-03-03v4No1 / 18
898amnondominant caecum, male, canada, wild, anatomical space, adult organism, edmonton, canis latrans, coyote2022-04-19v4No1 / 19
256amnondominant caecum, left colon, right colon, sus scrofa, pig, united kingdom2017-11-26v4No1 / 19
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, age 4 weeks, broiler chicken2019-03-03v4No1 / 19
738amnondominant caecum, gallus gallus, chicken, age 30 days, united kingdom2021-01-30v3No1 / 19
108amnonincreases during fasting in mouse caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum mus musculus state of texas mouse )2017-04-07v4No1 / 19
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, free range chicken, age 4 days2019-03-03v4No1 / 20
434amnondominant feces, research facility, caecum, rattus norvegicus, sprague dawley, switzerland, rat2018-12-20v4No1 / 20
744amnondominant research facility, caecum, gallus gallus, male, chicken, cobb broiler chicken, age 35 days2021-02-21v3No1 / 21
853amnondominant research facility, oryctolagus cuniculus, french republic, cecal content, rabbit, caecum, juvenile, age 5 weeks, hyplus rabbit, soild food supplemented diet, solid food diet2021-12-20v3No1 / 21
108amnondominant united states of america, research facility, caecum, mus musculus, state of texas, mouse2017-04-07v4No1 / 21
108amnondominant united states of america, research facility, caecum, state of texas, quail, coturnix coturnix2017-04-07v4No1 / 21
124amnondominant feces, united states of america, caecum, mus musculus, c57bl/6j, mouse2017-04-14v4No1 / 21
611amnon high in ovariectomy ovariectomized female compared to control in female research facility caecum mus musculus mouse cecal content canada age 9 months 2020-04-21v4No1 / 22
611amnon high in control compared to ovariectomy ovariectomized female in female research facility caecum mus musculus mouse cecal content canada age 9 months 2020-04-21v4No1 / 22
673amnondominant control, research facility, caecum, sus scrofa, male, canada, pig, age 6 weeks, ascending colon, male organism, province of alberta2020-09-28v4No1 / 22
314amnondominant farm, caecum, sus scrofa, tibet autonomous region, pig, cecal content, china2018-04-10v4No1 / 23
738amnondominant caecum, gallus gallus, age 1 week, chicken, united kingdom2021-01-30v3No1 / 23
853amnon high in age 3 weeks compared to age 5 weeks in research facility caecum oryctolagus cuniculus french republic cecal content rabbit juvenile hyplus rabbit exclusive breastmilk diet 2021-12-18v3No1 / 23
853amnondominant research facility, caecum, oryctolagus cuniculus, french republic, cecal content, rabbit, age 3 weeks, juvenile, hyplus rabbit, exclusive breastmilk diet2021-12-18v3No1 / 24
853amnondominant research facility, caecum, oryctolagus cuniculus, french republic, cecal content, rabbit, juvenile, age 5 weeks, hyplus rabbit, exclusive breastmilk diet2021-12-20v3No1 / 24
447amnondominant united states of america, research facility, caecum, mus musculus, c57bl/6, state of maryland, mouse, charles river laboratories2019-01-08v4No1 / 24
447amnondominant united states of america, research facility, caecum, mus musculus, fasting, c57bl/6, state of maryland, mouse, charles river laboratories, every other day fasting2019-01-08v4No1 / 24
756amnondominant research facility, caecum, gallus gallus, canada, chicken, broiler chicken, lethbridge, age 35 days2021-03-22v4No1 / 24
13amnon high in stomach esophagus duodenum ileum mouth compared to feces rectum caecum colon in united states of america gastrointestinal system mus musculus 2016-11-08v4No1 / 25
673amnon high in salmonella enterica subsp. enterica serovar typhimurium salmonellosis compared to control in research facility caecum sus scrofa male canada pig age 6 weeks ascending colon male organism province of alberta 2020-09-28v4No1 / 25
776amnondominant caecum, gallus gallus, hawaii, chicken, wild, age 15-20 weeks, feral2021-04-25v3No1 / 26
558amnondominant united states of america, caecum, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v4No1 / 26
838amnondominant united states of america, research facility, caecum, state of ohio, meleagris gallopavo, wild turkey2021-10-13v4No1 / 27
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, age 3 weeks, free range chicken2019-03-03v4No1 / 27
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, free range chicken, age 12 weeks2019-03-03v4No1 / 27
495amnondominant farm, caecum, gallus gallus, kingdom of spain, chicken, broiler chicken, age 2 weeks2019-03-03v4No1 / 28
738amnon high in high wellfare feed compared to standard feed in caecum gallus gallus chicken age 30 days united kingdom 2021-01-30v3No1 / 28
127amnondominant united states of america, caecum, gallus gallus, chicken, age 14-28 days2017-04-14v4No1 / 28
673amnon high in salmonella enterica subsp. enterica serovar typhimurium salmonellosis compared to control in research facility caecum sus scrofa male canada pig age 6 weeks ascending colon male organism province of alberta 2020-09-28v4No1 / 29
622amnon high in ileum compared to caecum in research facility gallus gallus chicken great britain liverpool age 42 days 2020-05-08v4No1 / 29
108amnondecreases during fasting in mouse caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum mus musculus state of texas mouse )2017-04-07v4No1 / 29
673amnon high in ileum compared to caecum ascending colon in control research facility sus scrofa male canada pig age 6 weeks male organism province of alberta 2020-09-28v4No1 / 31
611amnon high in female compared to male in research facility caecum mus musculus mouse cecal content canada age 9 months 2020-04-21v4No1 / 33
108amnonincreases during fasting in quail caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum state of texas quail coturnix coturnix )2017-04-07v4No1 / 33
19amnonhigher in CD compared to control in biopsies ( high in crohn's disease compared to control in homo sapiens united states of america rectum caecum colon sigmoid colon terminal ileum biopsy children )2016-11-14v4No1 / 34
127amnonhigher in vaccinated chickens ( high in vaccination salmune vaccination compared to control in united states of america caecum gallus gallus chicken )2017-04-14v4No1 / 34
897amnon high in broiler chicken compared to layer chicken isa brown in research facility caecum gallus gallus male australia chicken age 4 weeks adelaide 2022-04-18v3No1 / 35
19amnoncommon in biopsies of children (IBD study) (common homo sapiens, united states of america, rectum, caecum, colon, sigmoid colon, terminal ileum, biopsy, children)2016-11-14v4No1 / 40
14amnon high in stomach duodenum jejunum ileum compared to feces caecum transverse colon left colon right colon in united states of america gastrointestinal system mus musculus 2016-11-08v4No1 / 42
738amnon high in standard feed compared to high wellfare feed in caecum gallus gallus age 1 week chicken united kingdom 2021-01-30v3No1 / 43
738amnon high in standard feed compared to high wellfare feed in caecum gallus gallus chicken age 30 days united kingdom 2021-01-30v3No1 / 45
611amnonhigher in feces of mice exposed to cigarette smoke for 6 months compared to controls ( high in nicotine dependence compared to control in research facility caecum mus musculus mouse cecal content canada age 9 months )2020-04-21v4No1 / 45
300amnon high in high capacity running strain compared to low capacity running strain in united states of america female research facility caecum rattus norvegicus rat ovariectomy age 38 weeks 2018-02-27v4No1 / 45
853amnon high in exclusive breastmilk diet compared to soild food supplemented diet solid food diet in research facility caecum oryctolagus cuniculus french republic cecal content rabbit juvenile age 5 weeks hyplus rabbit 2021-12-20v3No1 / 47
495amnon high in typhlitis disease intestinal disease compared to control in farm caecum gallus gallus kingdom of spain chicken free range chicken 2019-03-03v4No1 / 48
853amnon high in age 5 weeks compared to age 3 weeks in research facility caecum oryctolagus cuniculus french republic cecal content rabbit juvenile hyplus rabbit exclusive breastmilk diet 2021-12-18v3No1 / 49
256amnonlower in intestinal contents compared to mucosal scraping in pig caecum ( high in mucosa compared to intestinal contents in caecum sus scrofa pig united kingdom )2017-11-26v4No1 / 50
14amnon high in feces caecum transverse colon left colon right colon compared to stomach duodenum jejunum ileum in united states of america gastrointestinal system mus musculus 2016-11-08v4No1 / 51
127amnoncommon united states of america, caecum, gallus gallus, chicken, age 14-28 days2017-04-14v4No1 / 51
897amnon high in layer chicken isa brown compared to broiler chicken in research facility caecum gallus gallus male australia chicken age 4 weeks adelaide 2022-04-18v3No1 / 52
300amnon high in low capacity running strain compared to high capacity running strain in united states of america female research facility caecum rattus norvegicus rat ovariectomy age 38 weeks 2018-02-27v4No1 / 52
279amnon high in stomach small intestine compared to caecum colon in ochotonidae pika china 2018-01-24v4No1 / 53
898amnoncommon caecum, male, canada, wild, anatomical space, adult organism, edmonton, canis latrans, coyote2022-04-19v4No1 / 55
700amnon high in colon compared to caecum in control research facility sus scrofa belgium pig age 2 months 2028-04-01v3No1 / 59
558amnon high in duodenum compared to caecum in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v4No1 / 64
738amnoncommon caecum, gallus gallus, age 1 week, chicken, united kingdom2021-01-30v3No1 / 64
611amnonlower in feces of mice exposed to cigarette smoke for 6 months compared to controls ( high in control compared to nicotine dependence in research facility caecum mus musculus mouse cecal content canada age 9 months )2020-04-21v4No1 / 66
738amnon high in age 1 week compared to age 30 days in caecum gallus gallus chicken united kingdom 2021-01-30v3No1 / 68
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, free range chicken, age 4 days2019-03-03v4No1 / 69
386amnon high in ecuador compared to bolivia in caecum mus musculus mouse wild 2018-10-28v4No1 / 70
744amnon high in cloaca compared to caecum in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v3No1 / 70
853amnon high in soild food supplemented diet solid food diet compared to exclusive breastmilk diet in research facility oryctolagus cuniculus french republic cecal content rabbit caecum juvenile age 5 weeks hyplus rabbit 2021-12-20v3No1 / 71
127amnonhigher in non-vaccinated chickens ( high in control compared to vaccination salmune vaccination in united states of america caecum gallus gallus chicken )2017-04-14v4No1 / 72
108amnondecreases during fasting in quail caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum state of texas quail coturnix coturnix )2017-04-07v4No1 / 76
434amnonhigher in antibiotics treated rats compared to controls ( high in antibiotic ampicillin neomycin compared to control in feces research facility caecum rattus norvegicus sprague dawley switzerland rat )2018-12-20v4No1 / 80
108amnon high in caecum compared to colon in united states of america research facility oreochromis niloticus state of texas nile tilapia 2017-04-07v4No1 / 80
853amnoncommon research facility, caecum, oryctolagus cuniculus, french republic, cecal content, rabbit, age 3 weeks, juvenile, hyplus rabbit, exclusive breastmilk diet2021-12-18v3No1 / 82
108amnon high in caecum compared to colon in united states of america research facility mus musculus state of texas mouse 2017-04-07v4No1 / 86
673amnon high in control compared to salmonella enterica subsp. enterica serovar typhimurium salmonellosis in research facility caecum sus scrofa male canada pig age 6 weeks ascending colon male organism province of alberta 2020-09-28v4No1 / 88
904amnoncommon research facility, caecum, gallus gallus, chicken, china, hen, jinghong-1, age 42 weeks2022-05-18v3No1 / 89
386amnoncommon caecum, mus musculus, ecuador, mouse, wild2018-10-28v4No1 / 90
495amnon high in broiler chicken compared to free range chicken in farm caecum gallus gallus kingdom of spain chicken age 3 weeks 2019-03-03v4No1 / 90
447amnonlower in mice with evert other day fasting compared to controls ( high in control compared to fasting every other day fasting in united states of america research facility caecum mus musculus c57bl/6 state of maryland mouse charles river laboratories )2019-01-08v4No1 / 92
363amnoncommon dairy, rectum, caecum, colon, ovis aries, italy, obsolete_juvenile stage, age 30 days2018-08-29v4No1 / 94
838amnoncommon united states of america, research facility, caecum, state of ohio, meleagris gallopavo, wild turkey2021-10-13v4No1 / 94
853amnoncommon research facility, caecum, oryctolagus cuniculus, french republic, cecal content, rabbit, juvenile, age 5 weeks, hyplus rabbit, exclusive breastmilk diet2021-12-20v3No1 / 96
558amnon high in colon compared to caecum in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v4No1 / 97
127amnonhigh in old (14-28 days) compared to young (0-3 day) chickens ( high in age old age compared to young age in united states of america caecum gallus gallus chicken )2017-04-14v4No1 / 98
673amnoncommon research facility, caecum, sus scrofa, male, canada, pig, age 6 weeks, ascending colon, male organism, salmonella enterica subsp. enterica serovar typhimurium, salmonellosis, province of alberta2020-09-28v4No1 / 99
124amnonhigher in ifn-gamma knockout comapred to wt ( high in interferon gamma knockout compared to control in feces united states of america caecum mus musculus c57bl/6j mouse )2017-04-14v4No1 / 100
363amnon high in rectum caecum colon compared to ruminant reticulum omasum rumen in dairy ovis aries italy obsolete_juvenile stage age 30 days 2018-08-29v4No1 / 101
256amnonhigher in intestinal contents compared to mucosal scraping in pig caecum ( high in intestinal contents compared to mucosa in caecum sus scrofa pig united kingdom )2017-11-26v4No1 / 103
108amnon high in colon compared to caecum in united states of america research facility oreochromis niloticus state of texas nile tilapia 2017-04-07v4No1 / 103
673amnon high in control compared to salmonellosis salmonella enterica subsp. enterica serovar typhimurium in research facility caecum sus scrofa male canada pig age 6 weeks ascending colon male organism province of alberta 2020-09-28v4No1 / 104
447amnonhigher in mice with evert other day fasting compared to controls ( high in fasting every other day fasting compared to control in united states of america research facility caecum mus musculus c57bl/6 state of maryland mouse charles river laboratories )2019-01-08v4No1 / 106
776amnon high in wild age 15-20 weeks feral compared to research facility captive broiler chicken age 5 weeks in caecum gallus gallus hawaii chicken 2021-04-25v3No1 / 107
853amnoncommon research facility, oryctolagus cuniculus, french republic, cecal content, rabbit, caecum, juvenile, age 5 weeks, hyplus rabbit, soild food supplemented diet, solid food diet2021-12-20v3No1 / 114
744amnon high in ileum compared to caecum in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v3No1 / 121
124amnonlower in ifn-gamma knockout comapred to wt ( high in control compared to interferon gamma knockout in feces united states of america caecum mus musculus c57bl/6j mouse )2017-04-14v4No1 / 121
386amnonnegatively correlated with altitude (0-4km) in house mouse caecum ( high in low altitude compared to high altitude in caecum mus musculus south america mouse wild )2018-10-28v4No1 / 122
108amnondecreases during fasting in nile tilapia caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum oreochromis niloticus state of texas nile tilapia )2017-04-07v4No1 / 122
386amnoncommon caecum, mus musculus, bolivia, mouse, wild2018-10-28v4No1 / 129
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, broiler chicken, age 2 weeks2019-03-03v4No1 / 134
314amnon high in sus scrofa pig compared to tibetan pig tibetan swine in farm caecum tibet autonomous region cecal content china 2018-04-10v4No1 / 136
897amnoncommon research facility, caecum, gallus gallus, male, australia, chicken, age 4 weeks, broiler chicken, adelaide2022-04-18v3No1 / 136
744amnoncommon research facility, caecum, gallus gallus, male, chicken, cobb broiler chicken, age 35 days2021-02-21v3No1 / 141
897amnoncommon research facility, caecum, gallus gallus, male, australia, chicken, age 4 weeks, adelaide, layer chicken, isa brown2022-04-18v3No1 / 144
611amnoncommon research facility, caecum, mus musculus, mouse, cecal content, canada, age 9 months2020-04-21v4No1 / 145
279amnoncommon caecum, colon, ochotonidae, pika, china2018-01-24v4No1 / 146
300amnoncommon united states of america, female, research facility, caecum, rattus norvegicus, rat, ovariectomy, age 38 weeks2018-02-27v4No1 / 150
780amnon high in small intestine duodenum jejunum compared to caecum in research facility gallus gallus chicken china jinzhou city prefecture 2021-04-28v3No1 / 153
673amnoncommon control, research facility, caecum, sus scrofa, male, canada, pig, age 6 weeks, ascending colon, male organism, province of alberta2020-09-28v4No1 / 154
558amnoncommon united states of america, caecum, state of wyoming, bird, centrocercus urophasianus, greater sage-grouse2019-09-20v4No1 / 155
314amnon high in tibetan pig tibetan swine compared to sus scrofa pig in farm caecum tibet autonomous region cecal content china 2018-04-10v4No1 / 157
108amnon high in colon compared to caecum in united states of america research facility state of texas quail coturnix coturnix 2017-04-07v4No1 / 157
25amnon high in control compared to antibiotic in research facility caecum oryctolagus cuniculus rex rabbit sichuan province 2016-12-01v4No1 / 163
456amnoncommon united states of america, female, research facility, caecum, mus musculus, c57bl/6, mouse2019-01-10v4No1 / 167
604amnoncommon research facility, caecum, gallus gallus, chicken, cecal content, china2020-04-06v3No1 / 185
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, age 4 weeks, broiler chicken2019-03-03v4No1 / 185
744amnon high in caecum compared to cloaca in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v3No1 / 187
386amnoncommon caecum, mus musculus, brazil, mouse, wild2018-10-28v4No1 / 189
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, free range chicken, age 8 weeks2019-03-03v4No1 / 189
776amnoncommon caecum, gallus gallus, hawaii, chicken, wild, age 15-20 weeks, feral2021-04-25v3No1 / 191
495amnon high in free range chicken compared to broiler chicken in farm caecum gallus gallus kingdom of spain chicken age 3 weeks 2019-03-03v4No1 / 199
738amnoncommon caecum, gallus gallus, chicken, age 30 days, united kingdom2021-01-30v3No1 / 202
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, broiler chicken, age 6 weeks2019-03-03v4No1 / 210
780amnon high in caecum compared to small intestine duodenum jejunum in research facility gallus gallus chicken china jinzhou city prefecture 2021-04-28v3No1 / 212
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, free range chicken, age 12 weeks2019-03-03v4No1 / 214
108amnoncommon united states of america, research facility, caecum, state of texas, quail, coturnix coturnix2017-04-07v4No1 / 216
808amnon high in ileum compared to caecum in research facility gallus gallus germany digesta chicken age 35 weeks hen 2021-06-20v1No1 / 224
673amnon high in caecum ascending colon compared to ileum in control research facility sus scrofa male canada pig age 6 weeks male organism province of alberta 2020-09-28v4No1 / 228
25amnon high in antibiotic compared to control in research facility caecum oryctolagus cuniculus rex rabbit sichuan province 2016-12-01v4No1 / 231
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, age 3 weeks, free range chicken2019-03-03v4No1 / 236
434amnonlower in antibiotics treated rats compared to controls ( high in control compared to antibiotic ampicillin neomycin in feces research facility caecum rattus norvegicus sprague dawley switzerland rat )2018-12-20v4No1 / 238
434amnoncommon feces, research facility, caecum, rattus norvegicus, sprague dawley, switzerland, rat2018-12-20v4No1 / 238
108amnoncommon united states of america, research facility, caecum, mus musculus, state of texas, mouse2017-04-07v4No1 / 241
622amnoncommon research facility, caecum, gallus gallus, chicken, great britain, liverpool, age 42 days2020-05-08v4No1 / 244
386amnon high in bolivia compared to ecuador in caecum mus musculus mouse wild 2018-10-28v4No1 / 246
776amnon high in research facility captive broiler chicken age 5 weeks compared to wild age 15-20 weeks feral in caecum gallus gallus hawaii chicken 2021-04-25v3No1 / 252
386amnonpositively correlated with altitude (0-4km) in house mouse caecum ( high in high altitude compared to low altitude in caecum mus musculus south america mouse wild )2018-10-28v4No1 / 255
808amnon high in digesta compared to mucosa in research facility caecum gallus gallus germany chicken age 35 weeks hen 2021-06-20v1No1 / 266
744amnon high in caecum compared to ileum in research facility gallus gallus male chicken cobb broiler chicken age 35 days 2021-02-21v3No1 / 286
495amnoncommon farm, caecum, gallus gallus, kingdom of spain, chicken, age 6 weeks, free range chicken2019-03-03v4No1 / 290
780amnoncommon research facility, caecum, gallus gallus, chicken, china, jinzhou city prefecture2021-04-28v3No1 / 294
111amnon high in ruminant reticulum omasum rumen compared to rectum caecum colon ileum in ovis aries mongolian sheep china 2017-04-09v4No1 / 294
622amnon high in caecum compared to ileum in research facility gallus gallus chicken great britain liverpool age 42 days 2020-05-08v4No1 / 307
13amnon high in feces rectum caecum colon compared to stomach esophagus duodenum ileum mouth in united states of america gastrointestinal system mus musculus 2016-11-08v4No1 / 316
756amnoncommon research facility, caecum, gallus gallus, canada, chicken, broiler chicken, lethbridge, age 35 days2021-03-22v4No1 / 321
447amnoncommon united states of america, research facility, caecum, mus musculus, fasting, c57bl/6, state of maryland, mouse, charles river laboratories, every other day fasting2019-01-08v4No1 / 328
111amnoncommon rectum, caecum, colon, ileum, ovis aries, mongolian sheep, china2017-04-09v4No1 / 330
456amnon high in caecum compared to tongue in united states of america female research facility mus musculus c57bl/6 mouse 2019-01-10v4No1 / 338
124amnoncommon feces, united states of america, caecum, mus musculus, c57bl/6j, mouse2017-04-14v4No1 / 339
776amnoncommon research facility, caecum, gallus gallus, hawaii, chicken, captive, broiler chicken, age 5 weeks2021-04-25v3No1 / 343
447amnoncommon united states of america, research facility, caecum, mus musculus, c57bl/6, state of maryland, mouse, charles river laboratories2019-01-08v4No1 / 343
558amnon high in caecum compared to colon in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v4No1 / 359
363amnon high in ruminant reticulum omasum rumen compared to rectum caecum colon in dairy ovis aries italy obsolete_juvenile stage age 30 days 2018-08-29v4No1 / 360
108amnon high in caecum compared to colon in united states of america research facility state of texas quail coturnix coturnix 2017-04-07v4No1 / 380
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum left colon right colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 387
314amnoncommon farm, caecum, sus scrofa, tibet autonomous region, pig, cecal content, china2018-04-10v4No1 / 402
808amnoncommon research facility, caecum, gallus gallus, germany, digesta, chicken, age 35 weeks, hen2021-06-20v1No1 / 406
186amnoncommon united states of america, research facility, caecum, sprague dawley, rattus, rat2017-08-23v4No1 / 407
495amnon high in control compared to typhlitis disease intestinal disease in farm caecum gallus gallus kingdom of spain chicken free range chicken 2019-03-03v4No1 / 412
905amnoncommon research facility, caecum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v3No1 / 417
808amnoncommon research facility, mucosa, caecum, gallus gallus, germany, chicken, age 35 weeks, hen2021-06-20v1No1 / 446
19amnonhigher in controls compared to CD in biopsies ( high in control compared to crohn's disease in homo sapiens united states of america rectum caecum colon sigmoid colon terminal ileum biopsy children )2016-11-14v4No1 / 459
111amnon high in rectum caecum colon ileum compared to ruminant reticulum omasum rumen in ovis aries mongolian sheep china 2017-04-09v4No1 / 464
314amnoncommon farm, caecum, tibet autonomous region, cecal content, tibetan pig, tibetan swine, china2018-04-10v4No1 / 467
738amnon high in age 30 days compared to age 1 week in caecum gallus gallus chicken united kingdom 2021-01-30v3No1 / 474
558amnon high in caecum compared to duodenum in united states of america state of wyoming bird centrocercus urophasianus greater sage-grouse 2019-09-20v4No1 / 488
256amnoncommon caecum, left colon, right colon, sus scrofa, pig, united kingdom2017-11-26v4No1 / 490
808amnon high in ileum compared to caecum in research facility mucosa gallus gallus germany chicken age 35 weeks hen 2021-06-20v1No1 / 587
264amnoncommon research facility, caecum, oryctolagus cuniculus, rex rabbit, jiangsu province, china2017-12-11v4No1 / 622
279amnon high in caecum colon compared to stomach small intestine in ochotonidae pika china 2018-01-24v4No1 / 634
25amnoncommon research facility, caecum, oryctolagus cuniculus, rex rabbit, sichuan province2016-12-01v4No1 / 669
808amnon high in mucosa compared to digesta in research facility caecum gallus gallus germany chicken age 35 weeks hen 2021-06-20v1No1 / 701
256amnonlower in small intestine compared to colon in pigs ( high in caecum left colon right colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-26v4No1 / 740
632amnon high in feces compared to caecum cecal content in united states of america research facility adult equus caballus state of texas horse 2020-06-10v4No1 / 897
632amnoncommon united states of america, research facility, caecum, adult, equus caballus, state of texas, cecal content, horse2020-06-10v4No1 / 914
632amnon high in caecum cecal content compared to feces in united states of america research facility adult equus caballus state of texas horse 2020-06-10v4No1 / 943
905amnon high in jejunum ileum compared to feces caecum colon in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v3No1 / 1092
808amnon high in caecum compared to ileum in research facility gallus gallus germany digesta chicken age 35 weeks hen 2021-06-20v1No1 / 1776
808amnon high in caecum compared to ileum in research facility mucosa gallus gallus germany chicken age 35 weeks hen 2021-06-20v1No1 / 2147
905amnon high in feces caecum colon compared to jejunum ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v3No1 / 2246
905amnon high in feces caecum colon compared to abomasum rumen in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v3No1 / 2270
905amnon high in abomasum rumen compared to feces caecum colon in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v3No1 / 2737

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