Summary for ontology term: chicken

Number of annotations with term: 46

Annotations:

common ontology terms
term enrichment score
TermScore
gallus gallus0.909091
chicken0.909091
broiler chicken0.532710
free range chicken0.361111
caecum0.158192
age 2 weeks0.153846
kingdom of spain0.152778
farm0.150725
age 4 weeks0.142857
age 6 weeks0.137931
age 3 weeks0.137931
united kingdom0.135593
viet nam0.115385
austria0.114286
thailand0.109091
age0.080537
age 3 days0.080000
age 4 days0.080000
age 12 weeks0.080000
age 14-28 days0.080000
campylobacter0.080000
LOWER IN campylobacter0.080000
age 15 - 35 days0.080000
old age0.078431
LOWER IN young age0.078431
age 8 weeks0.076923
young age0.075472
LOWER IN old age0.075472
LOWER IN typhlitis0.041667
LOWER IN intestinal disease0.041667
typhlitis0.041667
intestinal disease0.041667
LOWER IN free range chicken0.041667
LOWER IN broiler chicken0.041667
LOWER IN vaccination0.041667
LOWER IN salmune vaccination0.041667
salmune vaccination0.041667
LOWER IN viet nam0.041667
vaccination0.040816
LOWER IN thailand0.040816
LOWER IN disease0.040000
disease0.038462
LOWER IN age0.038462
LOWER IN control0.036923
control0.036697
feces0.027692
united states of america0.010274
Fraction of dbbact annotations with this term covered by the query
TermScore
gallus gallus0.833333
chicken0.833333
broiler chicken0.750000
age 2 weeks0.666667
age 3 days0.500000
free range chicken0.500000
age 4 days0.500000
age 12 weeks0.500000
LOWER IN typhlitis0.500000
LOWER IN intestinal disease0.500000
typhlitis0.500000
intestinal disease0.500000
LOWER IN free range chicken0.500000
LOWER IN broiler chicken0.500000
viet nam0.500000
LOWER IN vaccination0.500000
LOWER IN salmune vaccination0.500000
salmune vaccination0.500000
age 14-28 days0.500000
LOWER IN viet nam0.500000
campylobacter0.500000
LOWER IN campylobacter0.500000
age 15 - 35 days0.500000
age 4 weeks0.400000
old age0.400000
LOWER IN young age0.400000
age 6 weeks0.333333
age 3 weeks0.333333
age 8 weeks0.333333
vaccination0.333333
thailand0.333333
LOWER IN thailand0.333333
young age0.285714
LOWER IN old age0.285714
LOWER IN disease0.250000
disease0.166667
austria0.166667
LOWER IN age0.166667
united kingdom0.111111
age0.105263
caecum0.090909
kingdom of spain0.090909
farm0.086957
LOWER IN control0.023438
control0.023256
feces0.014354
united states of america0.005348
Fraction of annotations for the query sequences containing the term
TermScore
gallus gallus1.000000
chicken1.000000
caecum0.608696
farm0.565217
kingdom of spain0.478261
broiler chicken0.413043
feces0.391304
free range chicken0.282609
united kingdom0.173913
united states of america0.130435
age 2 weeks0.086957
age 4 weeks0.086957
age 6 weeks0.086957
age 3 weeks0.086957
control0.086957
LOWER IN control0.086957
austria0.086957
viet nam0.065217
age0.065217
thailand0.065217
age 3 days0.043478
age 4 days0.043478
age 8 weeks0.043478
age 12 weeks0.043478
young age0.043478
LOWER IN old age0.043478
old age0.043478
LOWER IN young age0.043478
age 14-28 days0.043478
campylobacter0.043478
LOWER IN campylobacter0.043478
age 15 - 35 days0.043478
LOWER IN typhlitis0.021739
LOWER IN disease0.021739
LOWER IN intestinal disease0.021739
typhlitis0.021739
disease0.021739
intestinal disease0.021739
LOWER IN free range chicken0.021739
LOWER IN broiler chicken0.021739
LOWER IN vaccination0.021739
LOWER IN salmune vaccination0.021739
vaccination0.021739
salmune vaccination0.021739
LOWER IN thailand0.021739
LOWER IN viet nam0.021739
LOWER IN age0.021739
Exp. ID User ID Description Date Region Flag Sequences
379amnonhigher in chickens infeceted with campylobacter at age 20 days compared to noninfected controls ( high in campylobacter compared to control in feces gallus gallus chicken united kingdom )2018-09-14v4No1 / 2
127amnonhigh in young (0-3 days) compared to old (28 day) chickens ( high in age young age compared to old age in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 3
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, age 3 days, kingdom of spain, farm2019-03-03v4No1 / 4
495amnonhighfreq gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 6 weeks2019-03-03v4No1 / 6
497amnonhighfreq chicken, gallus gallus, broiler chicken, austria, farm, feces, age 2 weeks2019-03-04v4No1 / 9
497amnonhighfreq chicken, gallus gallus, broiler chicken, austria, farm, feces, age 4 weeks2019-03-04v4No1 / 10
495amnonhighfreq gallus gallus, chicken, caecum, broiler chicken, age 3 days, kingdom of spain, farm2019-03-03v4No1 / 12
568amnonhighfreq viet nam, broiler chicken, feces, chicken, gallus gallus2019-12-08v3No1 / 15
379amnonlower in chickens infeceted with campylobacter at age 20 days compared to noninfected controls ( high in control compared to campylobacter in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 15
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 6 weeks2019-03-03v4No1 / 16
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 8 weeks2019-03-03v4No1 / 18
495amnonhighfreq gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 4 weeks2019-03-03v4No1 / 19
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 4 days2019-03-03v4No1 / 20
497amnoncommon chicken, gallus gallus, broiler chicken, austria, farm, feces, age 4 weeks2019-03-04v4No1 / 21
568amnonhighfreq thailand, broiler chicken, feces, chicken, gallus gallus2019-12-08v3No1 / 23
379amnonhighfreq gallus gallus, chicken, feces, age 15 - 35 days, united kingdom2018-09-14v4No1 / 25
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 3 weeks2019-03-03v4No1 / 27
495amnonhighfreq gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 12 weeks2019-03-03v4No1 / 27
495amnonhighfreq gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 2 weeks2019-03-03v4No1 / 28
127amnonhighfreq gallus gallus, chicken, united states of america, caecum, age 14-28 days2017-04-14v4No1 / 28
379amnonlower in chickens infeceted with campylobacter at age 6 days compared to noninfected controls ( high in control compared to campylobacter in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 33
127amnonhigher in vaccinated chickens ( high in vaccination salmune vaccination compared to control in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 34
497amnoncommon chicken, gallus gallus, broiler chicken, austria, farm, feces, age 2 weeks2019-03-04v4No1 / 39
379amnonnegatively correlated with age 8-35 days in chickens ( high in young age compared to age old age in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 47
495amnon high in typhlitis disease intestinal disease compared to control in gallus gallus chicken caecum kingdom of spain farm free range chicken 2019-03-03v4No1 / 48
127amnoncommon gallus gallus, chicken, united states of america, caecum, age 14-28 days2017-04-14v4No1 / 51
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 4 days2019-03-03v4No1 / 69
379amnonhigher in chickens infeceted with campylobacter at age 6 days compared to noninfected controls ( high in campylobacter compared to control in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 69
127amnonhigher in non-vaccinated chickens ( high in control compared to vaccination salmune vaccination in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 72
495amnon high in broiler chicken compared to free range chicken in gallus gallus chicken caecum kingdom of spain farm age 3 weeks 2019-03-03v4No1 / 90
127amnonhigh in old (14-28 days) compared to young (0-3 day) chickens ( high in age old age compared to young age in gallus gallus chicken united states of america caecum )2017-04-14v4No1 / 98
568amnon high in viet nam compared to thailand in broiler chicken feces chicken gallus gallus 2019-12-08v3No1 / 119
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 2 weeks2019-03-03v4No1 / 134
379amnoncommon gallus gallus, chicken, feces, age 15 - 35 days, united kingdom2018-09-14v4No1 / 160
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 4 weeks2019-03-03v4No1 / 185
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 8 weeks2019-03-03v4No1 / 189
495amnon high in free range chicken compared to broiler chicken in gallus gallus chicken caecum kingdom of spain farm age 3 weeks 2019-03-03v4No1 / 199
568amnon high in thailand compared to viet nam in broiler chicken feces chicken gallus gallus 2019-12-08v3No1 / 206
495amnoncommon gallus gallus, chicken, caecum, broiler chicken, kingdom of spain, farm, age 6 weeks2019-03-03v4No1 / 210
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 12 weeks2019-03-03v4No1 / 214
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 3 weeks2019-03-03v4No1 / 236
379amnonpositively correlated with age 8-35 days in chickens ( high in age old age compared to young age in gallus gallus chicken feces united kingdom )2018-09-14v4No1 / 271
568amnoncommon viet nam, broiler chicken, feces, chicken, gallus gallus2019-12-08v3No1 / 272
495amnoncommon gallus gallus, chicken, caecum, kingdom of spain, farm, free range chicken, age 6 weeks2019-03-03v4No1 / 290
568amnoncommon thailand, broiler chicken, feces, chicken, gallus gallus2019-12-08v3No1 / 320
495amnon high in control compared to typhlitis disease intestinal disease in gallus gallus chicken caecum kingdom of spain farm free range chicken 2019-03-03v4No1 / 412

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