dbBact taxonomy

term enrichment score

Term	Score
clostridium difficile intestinal infectious disease	0.869565
diarrhea	0.705882
hospital	0.292683
valladolid	0.266667
clostridium difficile infection	0.210526
state of minnesota	0.173913
LOWER IN clostridium difficile intestinal infectious disease	0.153846
state of michigan	0.148148
LOWER IN non c. diff diarrhea	0.142857
humanized mouse	0.142857
clostridium difficile colitis	0.142857
non c. diff diarrhea	0.142857
australia	0.084211
kingdom of spain	0.081633
feces	0.035842
homo sapiens	0.033417
united states of america	0.017143
research facility	0.014493
adult	0.013559
LOWER IN control	0.011696

Fraction of dbbact annotations with this term covered by the query

Term	Score
diarrhea	1.000000
clostridium difficile intestinal infectious disease	0.833333
LOWER IN clostridium difficile intestinal infectious disease	0.500000
valladolid	0.500000
LOWER IN non c. diff diarrhea	0.333333
humanized mouse	0.333333
clostridium difficile colitis	0.333333
non c. diff diarrhea	0.333333
clostridium difficile infection	0.250000
hospital	0.200000
state of minnesota	0.166667
state of michigan	0.125000
kingdom of spain	0.052632
australia	0.047619
feces	0.018248
homo sapiens	0.017021
united states of america	0.008850
research facility	0.007874
adult	0.007042
LOWER IN control	0.006250

Fraction of annotations for the query sequences containing the term

Term	Score
feces	1.000000
homo sapiens	0.909091
clostridium difficile intestinal infectious disease	0.909091
hospital	0.545455
diarrhea	0.545455
australia	0.363636
united states of america	0.272727
state of minnesota	0.181818
clostridium difficile infection	0.181818
adult	0.181818
valladolid	0.181818
kingdom of spain	0.181818
state of michigan	0.181818
LOWER IN non c. diff diarrhea	0.090909
humanized mouse	0.090909
research facility	0.090909
clostridium difficile colitis	0.090909
LOWER IN control	0.090909
non c. diff diarrhea	0.090909
LOWER IN clostridium difficile intestinal infectious disease	0.090909

Exp. ID	User ID	Description	Date	Region	Flag	Sequences
325	amnon	higher in c. diff infeceted humanized mice compared to non-infected controls ( high in clostridium difficile intestinal infectious disease clostridium difficile colitis compared to control in humanized mouse feces united states of america research facility )	2018-04-29	v4	No	1 / -4
185	amnon	common in patients with c. diff infection before treatment (common homo sapiens, feces, united states of america, state of minnesota, clostridium difficile intestinal infectious disease)	2017-08-20	v4	No	1 / 6
94	amnon	common homo sapiens, clostridium difficile intestinal infectious disease, feces, state of michigan, diarrhea	2017-03-12	v4	No	1 / 8
390	amnon	dominant homo sapiens, feces, clostridium difficile intestinal infectious disease, australia, hospital, diarrhea	2018-11-04	v4	No	1 / 13
185	amnon	high freq. in patients with c. diff infection before treatment (dominant homo sapiens, feces, united states of america, state of minnesota, clostridium difficile intestinal infectious disease)	2017-08-20	v4	No	1 / 14
94	amnon	dominant homo sapiens, clostridium difficile intestinal infectious disease, feces, state of michigan, diarrhea	2017-03-12	v4	No	1 / 14
390	amnon	lower in patients with c. diff diarrhea compared to non-c. diff diarrhea ( high in non c. diff diarrhea compared to clostridium difficile intestinal infectious disease in homo sapiens feces australia hospital diarrhea )	2018-11-04	v4	No	1 / 15
390	amnon	higher in patients with c. diff diarrhea compared to non-c. diff diarrhea ( high in clostridium difficile intestinal infectious disease compared to non c. diff diarrhea in homo sapiens feces australia hospital diarrhea )	2018-11-04	v4	No	1 / 16
728	amnon	common clostridium difficile infection, adult, hospital, valladolid, kingdom of spain, clostridium difficile intestinal infectious disease, feces, homo sapiens	2021-01-05	v3	No	1 / 16
728	amnon	dominant clostridium difficile infection, adult, hospital, valladolid, kingdom of spain, clostridium difficile intestinal infectious disease, feces, homo sapiens	2021-01-05	v3	No	1 / 21
390	amnon	common homo sapiens, feces, clostridium difficile intestinal infectious disease, australia, hospital, diarrhea	2018-11-04	v4	No	1 / 23

Summary for ontology term: clostridium difficile intestinal infectious disease

Annotations: