Summary for ontology term: colitis

Number of annotations with term: 75

Top positive-associated sequence

Taxonomy Sequence Recall
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__EnterococcusTACGTAGGTGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTTCTTAAGTCTGATGTGAAAGCCCCCGGCTCAACCGGGGAGGGTCATTGGAAACTGGGAGACTTGAGTGCAGAAGAGGAGAGTGGAATTCCATG0.571429
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__"Enterobacteriales";f__Enterobacteriaceae;g__Escherichia/ShigellaTACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTTTGTTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATCTGATACTGGCAAGCTTGAGTCTCGTAGAGGGGGGTAGAATTCCAGG0.500000
d__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Veillonellaceae;g__VeillonellaTACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGATCAGTCAGTCTGTCTTAAAAGTTCGGGGCTTAACCCCGTGATGGGATGGAAACTGCTGATCTAGAGTATCGGAGAGGAAAGTGGAATTCCTAGT0.428571
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__Pasteurellales;f__PasteurellaceaeTACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCAGGCGGTGACTTAAGTGAGGTGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATTTCATACTGGGTCGCTAGAGTACTTTAGGGAGGGGTAGAATTCCACG0.357143
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__"Enterobacteriales";f__EnterobacteriaceaeTACGGAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGCACGCAGGCGGTCTGTCAAGTCGGATGTGAAATCCCCGGGCTCAACCTGGGAACTGCATTCGAAACTGGCAGGCTAGAGTCTTGTAGAGGGGGGTAGAATTCCAGG0.357143
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__"Porphyromonadaceae";g__ButyricimonasTACGGGGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGCGCGTAGGCGGGACGTCAAGTCAGCGGTAAAAGACTGCAGCTAAACTGTAGCACGCCGTTGAAACTGGCGCCCTGGAGACGAGACGAGGGAGGCGGAACAAGTGAA0.357143
d__Bacteria;p__Firmicutes;c__Negativicutes;o__Selenomonadales;f__Veillonellaceae;g__VeillonellaTACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGCGGATAGGTCAGTCTGTCTTAAAAGTTCGGGGCTTAACCCCGTGATGGGATGGAAACTGCCAATCTAGAGTATCGGAGAGGAAAGTGGAATTCCTAGT0.357143
d__Bacteria;p__Firmicutes;c__Erysipelotrichia;o__Erysipelotrichales;f__Erysipelotrichaceae;g__Clostridium XVIIITACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGAGGGAGCAGGCGGCAGCAAGGGTCTGTGGTGAAAGCCTGAAGCTTAACTTCAGTAAGCCATAGAAACCAGGCAGCTAGAGTGCAGGAGAGGATCGTGGAATTCCATGT0.357143
d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillales_Incertae Sedis XI;g__GemellaTACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGTGGTTTAATAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGTTAAACTTGAGTGCAGGAGAGAAAAGTGGAATTCCTAG0.285714
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__PeptostreptococcusTACGTAGGGGGCTAGCGTTATCCGGATTTACTGGGCGTAAAGGGTGCGTAGGTGGTCTTTCAAGTCGGTGGTTAAAGGCTACGGCTCAACCGTAGTTAGCCTCCGAAACTGGAAGACTTGAGTGCAGGAGAGGAAAGTGGAATTCCCAGT0.285714

Top negative-associated sequence

Taxonomy Sequence Recall
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__GemmigerAACGTAGGGTGCAAGCGTTGTCCGGAATTACTGGGTGTAAAGGGAGCGCAGGCGGACCGGCAAGTTGGAAGTGAAAACTATGGGCTCAACCCATAAATTGCTTTCAAAACTGCTGGCCTTGAGTAGTGCAGAGGTAGGTGGAATTCCCGG0.888889
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGCAGGCGGCATGATAAGTCTGATGTGAAAACCCAAGGCTCAACCATGGGACTGCATTGGAAACTGTCGTGCTGGAGTGTCGGAGAGGTAAGCGGAATTCCTAG0.888889
d__BacteriaTACGTAGGTGACAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGCGTAGGCGGACTGTCAAGTCAGTCGTGAAATACCGGGGCTTAACCCCGGGGCTGCGATTGAAACTGACAGCCTTGAGTATCGGAGAGGAAAGCGGAATTCCTAG0.888889
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__DoreaTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGCACGGCAAGCCAGATGTGAAAGCCCGGGGCTCAACCCCGGGACTGCATTTGGAACTGCTGAGCTAGAGTGTCGGAGAGGCAAGTGGAATTCCTAG0.777778
d__Bacteria;p__FirmicutesTACGTAGGGGGCGAGCGTTGTCCGGAATGATTGGGCGTAAAGGGCGCGTAGGCGGCCTGCTAAGTCTGGAGTGAAAGTCCTGCTTTCAAGGTGGGAATTGCTTTGGATACTGGTGGGCTGGAGTGCAGGAGAGGAAAGCGGAATTACCGG0.777778
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTACGTAGGGAGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGTGCGTAGGCGGATTGGCAAGTCAGAAGTGAAATCCATGGGCTTAACCCATGAACTGCTTTTGAAACTGTTAGTCTTGAGTGAAGTAGAGGTAGGCGGAATTCCCGG0.666667
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__FusicatenibacterTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGCAAGGCAAGTCTGATGTGAAAACCCAGGGCTTAACCCTGGGACTGCATTGGAAACTGTCTGGCTCGAGTGCCGGAGAGGTAAGCGGAATTCCTAG0.666667
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Lachnospiraceae;g__Clostridium XlVaTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGTAAAGCAAGTCTGAAGTGAAAGCCCGGGGCTCAACCCCGGGACTGCTTTGGAAACTGTTTAACTAGAGTGCTGGAGAGGTAAGCGGAATTCCTAG0.666667
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales";f__"Rikenellaceae";g__AlistipesTACGGAGGATCCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGTTTGATAAGTTAGAGGTGAAATACCGGGGCTCAACTCCGGAACTGCCTCTAATACTGTTGAACTAGAGAGTAGTTGCGGTAGGCGGAATGTATGG0.666667
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGAGCGTAGACGGCTTTGCAAGTCTGACGTGAAACTCCGGGGCTCAACTCCGGAACTGCGTTGGAAACTGTAAGGCTTGAGTGCCGGAGAGGTAAGCGGAATTCCTAG0.666667

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTACGTAGGGGGCAAGCGTTATCCGGATTTACTGGGTGTAAAGGGGGCGCAGACGGCAGTGCAAGCCAGGAGTGAAAGCCCGGGGCCCAACCCCGGGACTGCTCTTGGAACTGCAAAGCTGGAGTGCAGGAGGGGCAGGCGGAATTCCTGG0.421053
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales"TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGGCCGGTAAGTCAGCGGTAAAATAGCGGGGCTCAACCCCGTCGAGCCGTTGAAACTGCCGGTCTTGAGTGGGCGAGAAGTGCGCGGAATGCGTGGT0.416667
d__Bacteria;p__"Bacteroidetes"TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGTCTGTTAAGTCAGCGGTAAAATTGCGGGGCTCAACCTCGCCGAGCCGTTGAAACTGGTAGACTTGAGTGGGCGAGAAGTACGCGGAATGCGTGGT0.384615
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales"TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGGATCTCAAGTCAGCGGTCAAATCGTGGGGCCCAACCCCATTCCGCCGTTGAAACTGGGATTCTTGAGGGATCGAGAGGTATGCGGAATGCGTGGT0.380952
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales"TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGGATTTCAAGTCAGCGGTCAAATCGTGGGGCCCAACCCCATTCCGCCGTTGAAACTGGGATTCTTGAGAGATCGAGAGGTATGCGGAATGCGTGGT0.347826
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGTGTAAAGGGCGTGTAGGCGGGATGGTAAGTCAGATGTGAAATACCGGGGCTCAACTCCGGGGCTGCATTTGAAACTGCCGTTCTTGAGTGTCGGAGAGGAAAGCGGAATTCCTAG0.347826
d__Bacteria;p__"Bacteroidetes"TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCATTTCAAGTCAGCGGTAAAATTGCGGGGCTCAACCCCGTAGAGCCGTTGAGACTGAGGAGCTAGAGACGGCGAGAGGTACGCGGAATGCGCAGT0.333333
d__Bacteria;p__"Bacteroidetes";c__"Bacteroidia";o__"Bacteroidales"TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGCAGGCGGACAGTTAAGTCAGCGGTAAAATAGCGGGGCTCAACCCCGTCGAGCCGTTGAAACTGGCAGTCTAGAGTGGGCGAGAAGTATGCGGAATGCGTGGT0.333333
d__Bacteria;p__"Bacteroidetes"TACGGAGGATGCGAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCATTGCAAGTCGGCGGTGAAAGACCATGGCTCAACCATGGCGAGCCGTCGAAACTGCGGGGCTTGAGAGGACGAGAGGTACGCGGAATGCGCGGT0.333333
d__BacteriaTACGTAGGGGGCGAGCGTTGTCCGGAATGATTGGGCGTAAAGGGCGTGTAGGCGGTTGAGTAAGTCTGGAGTGAAAGTCCTGTTTTCAAGATGGGAATTGCTTTGGATACTGCTTGACTTGAGTGCAGGAGAGGTTATCGGAATTCCCGG0.333333

Annotations:

common ontology terms
term enrichment score
TermScore
ulcerative colitis0.671060
LOWER IN ulcerative colitis0.387097
colitis0.278970
biopsy0.228070
LOWER IN colitis0.186770
human adult stage0.172888
crohn's disease0.159046
large intestine0.157303
rat0.151899
child0.149626
clostridium difficile colitis0.144578
sprague dawley0.134454
adolescent stage0.129032
LOWER IN crohn's disease0.129032
rattus0.129032
control0.123188
LOWER IN control0.118081
clostridium difficile infection0.114286
ireland0.112903
rectum0.108108
feces0.098233
los angeles0.096386
tucson0.096386
6-12 year-old child stage0.087912
homo sapiens0.081395
state of california0.080402
adult0.079698
guangzhou city prefecture0.077670
tnbs0.074074
acute severe colitis0.074074
intestinal mucosa0.074074
antibiotics induced colitis0.074074
united states of america0.072151
hospital0.069565
horse0.069565
remission0.068966
inflammatory bowel disease0.068966
biopsy site0.068966
rattus norvegicus0.067227
equus caballus0.067227
commonwealth of pennsylvania0.065041
adult organism0.054422
japan0.051613
age<17 years0.050633
immature stage0.050633
mild0.050633
LOWER IN severe0.050633
severe0.050633
LOWER IN mild0.050633
atlanta0.049383
province of alberta0.049383
wistar rat0.049383
research facility0.048113
china0.047006
antibiotic0.045455
czech republic0.043956
LOWER IN antibiotic0.043478
diarrhea0.043011
obsolete_juvenile stage0.042105
israel0.036697
mouse0.035088
mus musculus0.033058
c57bl/60.033058
male0.031873
canada0.030534
LOWER IN tnbs0.025974
LOWER IN amoxicillin0.025974
LOWER IN doxycycline0.025974
LOWER IN clostridium difficile colitis0.025974
LOWER IN antibiotics induced colitis0.025974
LOWER IN dnbs induced colitis0.025974
dnbs induced colitis0.025974
dss induced colitis0.025974
LOWER IN dss induced colitis0.025974
LOWER IN sulfasalazine0.025974
sulfasalazine0.025974
before antibiotics0.025641
LOWER IN non c. diff diarrhea0.025641
non c. diff diarrhea0.025641
LOWER IN clostridium difficile infection0.025641
humanized mouse0.025641
LOWER IN remission0.025316
LOWER IN biopsy site0.025316
LOWER IN biopsy0.025316
LOWER IN inflammatory bowel disease0.025316
LOWER IN vancomycin0.025000
clostridium difficile intestinal infectious disease0.024691
LOWER IN metronidazole0.024390
LOWER IN rectum0.024390
balb/c0.023810
iga positive fraction0.023810
LOWER IN iga negative fraction0.023810
iga negative fraction0.023810
LOWER IN iga positive fraction0.023810
state of texas0.023529
LOWER IN child0.022472
LOWER IN feces0.019608
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN colitis0.750000
clostridium difficile colitis0.750000
ulcerative colitis0.722222
colitis0.714286
LOWER IN ulcerative colitis0.705882
los angeles0.500000
LOWER IN tnbs0.500000
tnbs0.500000
acute severe colitis0.500000
LOWER IN amoxicillin0.500000
LOWER IN doxycycline0.500000
intestinal mucosa0.500000
large intestine0.500000
tucson0.500000
LOWER IN clostridium difficile colitis0.500000
age<17 years0.500000
immature stage0.500000
LOWER IN antibiotics induced colitis0.500000
antibiotics induced colitis0.500000
LOWER IN dnbs induced colitis0.500000
dnbs induced colitis0.500000
dss induced colitis0.500000
LOWER IN dss induced colitis0.500000
LOWER IN sulfasalazine0.500000
sulfasalazine0.500000
mild0.500000
LOWER IN severe0.500000
severe0.500000
LOWER IN mild0.500000
clostridium difficile infection0.400000
adolescent stage0.333333
LOWER IN crohn&#39;s disease0.333333
before antibiotics0.333333
biopsy0.333333
LOWER IN non c. diff diarrhea0.333333
non c. diff diarrhea0.333333
LOWER IN clostridium difficile infection0.333333
atlanta0.333333
humanized mouse0.333333
province of alberta0.333333
rattus0.333333
wistar rat0.333333
crohn's disease0.312500
remission0.250000
LOWER IN remission0.250000
6-12 year-old child stage0.250000
LOWER IN biopsy site0.250000
LOWER IN biopsy0.250000
inflammatory bowel disease0.250000
LOWER IN inflammatory bowel disease0.250000
biopsy site0.250000
human adult stage0.210526
LOWER IN vancomycin0.200000
sprague dawley0.181818
rat0.176471
rectum0.166667
clostridium difficile intestinal infectious disease0.166667
guangzhou city prefecture0.142857
LOWER IN metronidazole0.142857
ireland0.142857
LOWER IN rectum0.142857
czech republic0.125000
LOWER IN antibiotic0.117647
diarrhea0.111111
balb/c0.111111
iga positive fraction0.111111
LOWER IN iga negative fraction0.111111
iga negative fraction0.111111
LOWER IN iga positive fraction0.111111
child0.108696
hospital0.100000
state of texas0.100000
obsolete_juvenile stage0.100000
horse0.100000
rattus norvegicus0.090909
equus caballus0.090909
control0.084577
commonwealth of pennsylvania0.083333
LOWER IN control0.081633
LOWER IN child0.071429
state of california0.064516
israel0.058824
adult organism0.055556
antibiotic0.052632
feces0.052219
japan0.050000
adult0.043689
c57bl/60.043478
homo sapiens0.043344
united states of america0.039007
LOWER IN feces0.037037
canada0.035714
mouse0.031250
mus musculus0.028169
research facility0.027933
china0.025907
male0.022727
Fraction of annotations for the query sequences containing the term
TermScore
feces0.826667
homo sapiens0.666667
ulcerative colitis0.626667
united states of america0.480000
adult0.453333
LOWER IN ulcerative colitis0.266667
china0.253333
child0.240000
control0.226667
LOWER IN control0.213333
research facility0.173333
colitis0.173333
biopsy0.173333
human adult stage0.146667
rat0.133333
state of california0.106667
LOWER IN colitis0.106667
sprague dawley0.106667
crohn's disease0.106667
ireland0.093333
large intestine0.093333
adolescent stage0.080000
LOWER IN crohn&#39;s disease0.080000
rectum0.080000
clostridium difficile colitis0.080000
rattus0.080000
clostridium difficile infection0.066667
japan0.053333
guangzhou city prefecture0.053333
los angeles0.053333
6-12 year-old child stage0.053333
rattus norvegicus0.053333
male0.053333
hospital0.053333
tucson0.053333
equus caballus0.053333
horse0.053333
adult organism0.053333
commonwealth of pennsylvania0.053333
remission0.040000
tnbs0.040000
acute severe colitis0.040000
intestinal mucosa0.040000
mus musculus0.040000
mouse0.040000
antibiotic0.040000
antibiotics induced colitis0.040000
inflammatory bowel disease0.040000
biopsy site0.040000
LOWER IN antibiotic0.026667
diarrhea0.026667
atlanta0.026667
obsolete_juvenile stage0.026667
age<17 years0.026667
immature stage0.026667
canada0.026667
province of alberta0.026667
czech republic0.026667
wistar rat0.026667
c57bl/60.026667
israel0.026667
mild0.026667
LOWER IN severe0.026667
severe0.026667
LOWER IN mild0.026667
LOWER IN remission0.013333
LOWER IN tnbs0.013333
before antibiotics0.013333
LOWER IN vancomycin0.013333
LOWER IN metronidazole0.013333
LOWER IN amoxicillin0.013333
LOWER IN doxycycline0.013333
LOWER IN non c. diff diarrhea0.013333
non c. diff diarrhea0.013333
LOWER IN clostridium difficile colitis0.013333
LOWER IN clostridium difficile infection0.013333
balb/c0.013333
state of texas0.013333
clostridium difficile intestinal infectious disease0.013333
humanized mouse0.013333
LOWER IN antibiotics induced colitis0.013333
iga positive fraction0.013333
LOWER IN iga negative fraction0.013333
iga negative fraction0.013333
LOWER IN iga positive fraction0.013333
LOWER IN dnbs induced colitis0.013333
dnbs induced colitis0.013333
dss induced colitis0.013333
LOWER IN dss induced colitis0.013333
LOWER IN sulfasalazine0.013333
sulfasalazine0.013333
LOWER IN rectum0.013333
LOWER IN biopsy site0.013333
LOWER IN biopsy0.013333
LOWER IN child0.013333
LOWER IN inflammatory bowel disease0.013333
LOWER IN feces0.013333
Number of experiments associating the term to the sequence
TermScore
feces20.000000
control17.000000
LOWER IN control16.000000
homo sapiens14.000000
ulcerative colitis13.000000
LOWER IN ulcerative colitis12.000000
united states of america11.000000
adult9.000000
LOWER IN colitis6.000000
china5.000000
child5.000000
research facility5.000000
LOWER IN crohn&#39;s disease5.000000
crohn's disease5.000000
colitis5.000000
human adult stage4.000000
rat3.000000
biopsy3.000000
clostridium difficile colitis3.000000
state of california2.000000
adolescent stage2.000000
sprague dawley2.000000
LOWER IN antibiotic2.000000
rectum2.000000
clostridium difficile infection2.000000
mus musculus2.000000
mouse2.000000
rattus2.000000
remission1.000000
japan1.000000
LOWER IN remission1.000000
guangzhou city prefecture1.000000
los angeles1.000000
6-12 year-old child stage1.000000
LOWER IN tnbs1.000000
rattus norvegicus1.000000
male1.000000
tnbs1.000000
acute severe colitis1.000000
before antibiotics1.000000
LOWER IN vancomycin1.000000
LOWER IN metronidazole1.000000
LOWER IN amoxicillin1.000000
LOWER IN doxycycline1.000000
intestinal mucosa1.000000
ireland1.000000
large intestine1.000000
LOWER IN non c. diff diarrhea1.000000
hospital1.000000
diarrhea1.000000
tucson1.000000
non c. diff diarrhea1.000000
LOWER IN clostridium difficile colitis1.000000
LOWER IN clostridium difficile infection1.000000
balb/c1.000000
state of texas1.000000
atlanta1.000000
obsolete_juvenile stage1.000000
age<17 years1.000000
immature stage1.000000
clostridium difficile intestinal infectious disease1.000000
humanized mouse1.000000
LOWER IN antibiotics induced colitis1.000000
equus caballus1.000000
horse1.000000
adult organism1.000000
antibiotic1.000000
antibiotics induced colitis1.000000
iga positive fraction1.000000
LOWER IN iga negative fraction1.000000
canada1.000000
province of alberta1.000000
iga negative fraction1.000000
LOWER IN iga positive fraction1.000000
LOWER IN dnbs induced colitis1.000000
czech republic1.000000
wistar rat1.000000
dnbs induced colitis1.000000
dss induced colitis1.000000
c57bl/61.000000
israel1.000000
LOWER IN dss induced colitis1.000000
LOWER IN sulfasalazine1.000000
sulfasalazine1.000000
LOWER IN rectum1.000000
LOWER IN biopsy site1.000000
LOWER IN biopsy1.000000
inflammatory bowel disease1.000000
commonwealth of pennsylvania1.000000
LOWER IN child1.000000
LOWER IN inflammatory bowel disease1.000000
biopsy site1.000000
LOWER IN feces1.000000
mild1.000000
LOWER IN severe1.000000
severe1.000000
LOWER IN mild1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
689amnon high in non c. diff diarrhea compared to clostridium difficile colitis clostridium difficile infection in feces homo sapiens united states of america hospital diarrhea adult tucson 2028-03-11v41 / 1approvedNo
399amnon high in crohn's disease compared to ulcerative colitis in feces homo sapiens united states of america 2018-11-16v41 / 3approvedNo
689amnon high in clostridium difficile colitis clostridium difficile infection compared to non c. diff diarrhea in feces homo sapiens united states of america hospital diarrhea adult tucson 2028-03-11v41 / 3approvedNo
208amnonlower in TNBS induced colitis compared to controls ( high in control compared to colitis in feces united states of america mus musculus balb/c state of texas mouse )2017-10-06v41 / 4approvedNo
325amnonhigher in c. diff infeceted humanized mice compared to non-infected controls ( high in clostridium difficile colitis clostridium difficile intestinal infectious disease compared to control in feces united states of america research facility humanized mouse )2018-04-29v41 / 4approvedNo
779amnon high in ulcerative colitis compared to control in feces homo sapiens adult guangzhou city prefecture china 2021-04-28v41 / 5approvedNo
410amnonhigher in biopsies of severe treatment naive ulcerative colitis patients compared to mild ( high in severe ulcerative colitis compared to mild in homo sapiens united states of america rectum biopsy site child biopsy )2018-11-22v41 / 5approvedNo
856amnon high in control compared to ulcerative colitis ulcerative colitis in homo sapiens rectum adult biopsy intestinal mucosa china human adult stage 2022-01-09v31 / 6approvedNo
868amnon high in iga negative fraction compared to iga positive fraction in feces homo sapiens clostridium difficile colitis adult canada clostridium difficile infection province of alberta human adult stage 2022-02-12v41 / 6approvedNo
394amnon high in ulcerative colitis compared to control in feces homo sapiens united states of america adult state of california 2018-11-06v41 / 8approvedNo
866amnon high in ulcerative colitis ulcerative colitis compared to control in feces homo sapiens united states of america adult human adult stage 2022-02-08v41 / 9approvedNo
221amnonhigher in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in sulfasalazine compared to colitis in feces research facility sprague dawley rattus rat china )2017-10-25v41 / 11approvedNo
1020amnon high in remission ulcerative colitis compared to control in feces homo sapiens adult japan human adult stage 2023-04-06v31 / 13approvedNo
868amnon high in iga positive fraction compared to iga negative fraction in feces homo sapiens clostridium difficile colitis adult canada clostridium difficile infection province of alberta human adult stage 2022-02-12v41 / 13approvedNo
659amnondominant feces, homo sapiens, ulcerative colitis, child, acute severe colitis2020-09-19v41 / 16approvedNo
659amnon high in before antibiotics compared to antibiotic vancomycin metronidazole amoxicillin doxycycline in feces homo sapiens ulcerative colitis child acute severe colitis 2020-09-19v41 / 16approvedNo
902amnondominant feces, united states of america, colitis, antibiotic, equus caballus, horse, adult organism, colitis, antibiotics induced colitis2022-05-02v41 / 16approvedNo
395amnonhigher in kids with ibd compared to healthy donors ( high in child inflammatory bowel disease crohn's disease ulcerative colitis compared to control in feces homo sapiens united states of america commonwealth of pennsylvania )2018-11-13v41 / 16approvedNo
410amnonlower in severe treatment naive ulcerative colitis patients compared to mild ( high in severe ulcerative colitis compared to mild in feces homo sapiens united states of america child )2018-11-22v41 / 18approvedNo
689amnoncommon feces, homo sapiens, united states of america, hospital, clostridium difficile colitis, adult, clostridium difficile infection, tucson2028-03-11v41 / 19approvedNo
1020amnondominant feces, homo sapiens, adult, remission, ulcerative colitis, japan, human adult stage2023-04-06v31 / 20approvedNo
944amnondominant ulcerative colitis, adult, biopsy, ireland, large intestine, ulcerative colitis2022-11-26v31 / 20approvedNo
292amnondominant feces, homo sapiens, adult, ulcerative colitis, china2018-02-05v41 / 20approvedNo
866amnon high in control compared to ulcerative colitis ulcerative colitis in feces homo sapiens united states of america adult human adult stage 2022-02-08v41 / 20approvedNo
394amnondominant feces, homo sapiens, united states of america, adult, state of california, ulcerative colitis2018-11-06v41 / 20approvedNo
442amnonhigh freq. in tnbs induced colitis in rat feces (dominant feces, research facility, rattus norvegicus, sprague dawley, male, rat, tnbs, colitis, china)2019-01-06v41 / 21approvedNo
689amnondominant feces, homo sapiens, united states of america, hospital, clostridium difficile colitis, adult, clostridium difficile infection, tucson2028-03-11v41 / 22approvedNo
297amnon high in crohn's disease ulcerative colitis compared to control in feces homo sapiens united states of america child atlanta obsolete_juvenile stage age<17 years immature stage adolescent stage 2018-02-12v41 / 22approvedNo
944amnon high in crohn's disease crohn's disease compared to ulcerative colitis ulcerative colitis in adult biopsy ireland large intestine 2022-11-26v31 / 22approvedNo
395amnondominant feces, homo sapiens, united states of america, child, commonwealth of pennsylvania, inflammatory bowel disease, crohn's disease, ulcerative colitis2018-11-14v41 / 22approvedNo
779amnondominant feces, homo sapiens, ulcerative colitis, adult, guangzhou city prefecture, china2021-04-28v41 / 23approvedNo
959amnondominant feces, homo sapiens, united states of america, ulcerative colitis, child, state of california, ulcerative colitis, los angeles, 6-12 year-old child stage, adolescent stage2022-12-19v41 / 24approvedNo
779amnoncommon feces, homo sapiens, ulcerative colitis, adult, guangzhou city prefecture, china2021-04-28v41 / 25approvedNo
856amnondominant homo sapiens, rectum, ulcerative colitis, adult, biopsy, intestinal mucosa, ulcerative colitis, china, human adult stage2022-01-09v31 / 25approvedNo
395amnoncommon feces, homo sapiens, united states of america, child, commonwealth of pennsylvania, inflammatory bowel disease, crohn's disease, ulcerative colitis2018-11-14v41 / 25approvedNo
410amnonlower in biopsies of severe treatment naive ulcerative colitis patients compared to mild ( high in mild compared to severe ulcerative colitis in homo sapiens united states of america rectum biopsy site child biopsy )2018-11-22v41 / 26approvedNo
959amnon high in ulcerative colitis ulcerative colitis compared to control in feces homo sapiens united states of america child state of california los angeles 6-12 year-old child stage adolescent stage 2022-12-19v41 / 27approvedNo
659amnoncommon feces, homo sapiens, ulcerative colitis, child, acute severe colitis2020-09-19v41 / 27approvedNo
779amnon high in control compared to ulcerative colitis in feces homo sapiens adult guangzhou city prefecture china 2021-04-28v41 / 28approvedNo
1020amnoncommon feces, homo sapiens, adult, remission, ulcerative colitis, japan, human adult stage2023-04-06v31 / 31approvedNo
292amnon high in crohn's disease ulcerative colitis compared to control in feces homo sapiens adult china 2018-02-05v41 / 32approvedNo
856amnoncommon homo sapiens, rectum, ulcerative colitis, adult, biopsy, intestinal mucosa, ulcerative colitis, china, human adult stage2022-01-09v31 / 33approvedNo
399amnon high in ulcerative colitis compared to control in feces homo sapiens united states of america 2018-11-16v41 / 36approvedNo
944amnon high in ulcerative colitis ulcerative colitis compared to crohn's disease crohn's disease in adult biopsy ireland large intestine 2022-11-26v31 / 36approvedNo
944amnoncommon ulcerative colitis, adult, biopsy, ireland, large intestine, ulcerative colitis2022-11-26v31 / 38approvedNo
297amnon high in control compared to crohn's disease ulcerative colitis in feces homo sapiens united states of america child atlanta obsolete_juvenile stage age<17 years immature stage adolescent stage 2018-02-12v41 / 38approvedNo
944amnoncommon ulcerative colitis, adult, biopsy, ireland, large intestine, ulcerative colitis2022-11-26v31 / 38approvedNo
959amnoncommon feces, homo sapiens, united states of america, ulcerative colitis, child, state of california, ulcerative colitis, los angeles, 6-12 year-old child stage, adolescent stage2022-12-19v41 / 39approvedNo
221amnonlower in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in colitis compared to sulfasalazine in feces research facility sprague dawley rattus rat china )2017-10-25v41 / 44approvedNo
399amnon high in ulcerative colitis compared to crohn's disease in feces homo sapiens united states of america 2018-11-16v41 / 47approvedNo
442amnonlower in tnbs induced colitis compared to controls ( high in control compared to tnbs colitis in feces research facility rattus norvegicus sprague dawley male rat china )2019-01-06v41 / 49approvedNo
221amnonhigher in control compared to tnbs induced colitis in rat feces ( high in control compared to colitis in feces research facility sprague dawley rattus rat china )2017-10-25v41 / 49approvedNo
292amnoncommon feces, homo sapiens, adult, ulcerative colitis, china2018-02-05v41 / 53approvedNo
394amnoncommon feces, homo sapiens, united states of america, adult, state of california, ulcerative colitis2018-11-06v41 / 56approvedNo
944amnon high in ulcerative colitis ulcerative colitis compared to control in adult biopsy ireland large intestine 2022-11-26v31 / 60approvedNo
442amnonhigher in tnbs induced colitis compared to controls ( high in tnbs colitis compared to control in feces research facility rattus norvegicus sprague dawley male rat china )2019-01-06v41 / 63approvedNo
902amnoncommon feces, united states of america, colitis, antibiotic, equus caballus, horse, adult organism, colitis, antibiotics induced colitis2022-05-02v41 / 68approvedNo
221amnonlower in control compared to tnbs induced colitis in rat feces ( high in colitis compared to control in feces research facility sprague dawley rattus rat china )2017-10-25v41 / 68approvedNo
394amnon high in control compared to ulcerative colitis in feces homo sapiens united states of america adult state of california 2018-11-06v41 / 71approvedNo
1020amnon high in control compared to remission ulcerative colitis in feces homo sapiens adult japan human adult stage 2023-04-06v31 / 73approvedNo
334amnonhigher in dss induced colitis compared to controls ( high in dss induced colitis colitis compared to control in feces research facility mus musculus c57bl/6 israel mouse )2018-05-15v41 / 83approvedNo
395amnonlower in kids with ibd compared to healthy donors ( high in control compared to child inflammatory bowel disease crohn's disease ulcerative colitis in feces homo sapiens united states of america commonwealth of pennsylvania )2018-11-13v41 / 107approvedNo
410amnonlower in severe treatment naive ulcerative colitis patients compared to mild ( high in mild compared to severe ulcerative colitis in feces homo sapiens united states of america child )2018-11-22v41 / 110approvedNo
410amnonlower in feces compared to rectal biopsies in children with treatment naive uc ( high in rectum biopsy site biopsy compared to feces in homo sapiens united states of america child ulcerative colitis )2018-11-22v41 / 118approvedNo
410amnonhigher in feces compared to rectal biopsies in children with treatment naive uc ( high in feces compared to rectum biopsy site biopsy in homo sapiens united states of america child ulcerative colitis )2018-11-22v41 / 126approvedNo
334amnonlower in dss induced colitis compared to controls ( high in control compared to dss induced colitis colitis in feces research facility mus musculus c57bl/6 israel mouse )2018-05-15v41 / 153approvedNo
358amnonhigher in dnbs induced colitis compared to controls in rat feces ( high in dnbs induced colitis colitis compared to control in feces research facility rattus czech republic rat wistar rat )2018-08-19v41 / 154approvedNo
292amnon high in control compared to crohn's disease ulcerative colitis in feces homo sapiens adult china 2018-02-05v41 / 161approvedNo
399amnon high in control compared to ulcerative colitis in feces homo sapiens united states of america 2018-11-16v41 / 180approvedNo
959amnon high in control compared to ulcerative colitis ulcerative colitis in feces homo sapiens united states of america child state of california los angeles 6-12 year-old child stage adolescent stage 2022-12-19v41 / 194approvedNo
944amnon high in control compared to ulcerative colitis ulcerative colitis in adult biopsy ireland large intestine 2022-11-26v31 / 199approvedNo
442amnoncommon in tnbs induced colitis in rat feces (common feces, research facility, rattus norvegicus, sprague dawley, male, rat, tnbs, colitis, china)2019-01-06v41 / 360approvedNo
902amnon high in colitis antibiotic colitis antibiotics induced colitis compared to control in feces united states of america equus caballus horse adult organism 2022-05-02v41 / 364approvedNo
358amnonlower in dnbs induced colitis compared to controls in rat feces ( high in control compared to dnbs induced colitis colitis in feces research facility rattus czech republic rat wistar rat )2018-08-19v41 / 754approvedNo
902amnon high in control compared to colitis antibiotic colitis antibiotics induced colitis in feces united states of america equus caballus horse adult organism 2022-05-02v41 / 1755approvedNo

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