Summary for ontology term: colitis

Number of annotations with term: 49

Annotations:

common ontology terms
term enrichment score
TermScore
ulcerative colitis0.596610
LOWER IN ulcerative colitis0.303614
colitis0.242424
LOWER IN colitis0.213523
rat0.195440
sprague dawley0.179775
crohn's disease0.179104
rattus0.179104
child0.160000
clostridium difficile colitis0.145455
tucson0.140351
LOWER IN crohn's disease0.133333
guangzhou city prefecture0.115942
tnbs0.109091
acute severe colitis0.109091
inflammatory bowel disease0.109091
LOWER IN control0.100457
control0.099548
biopsy site0.098361
clostridium difficile infection0.098361
commonwealth of pennsylvania0.094118
feces0.094050
rattus norvegicus0.089888
hospital0.089888
biopsy0.085714
rectum0.075949
age<17 years0.075472
mild0.075472
LOWER IN severe0.075472
severe0.075472
LOWER IN mild0.075472
atlanta0.072727
wistar rat0.072727
homo sapiens0.065789
czech republic0.063492
united states of america0.062481
research facility0.061787
diarrhea0.061538
obsolete_juvenile stage0.057971
state of california0.055172
israel0.048193
c57bl/60.048193
china0.047833
mouse0.045627
adult0.045390
mus musculus0.042254
LOWER IN tnbs0.039216
LOWER IN dnbs induced colitis0.039216
dnbs induced colitis0.039216
dss induced colitis0.039216
LOWER IN dss induced colitis0.039216
LOWER IN doxycycline0.039216
LOWER IN amoxicillin0.039216
before antibiotics0.039216
LOWER IN sulfasalazine0.039216
sulfasalazine0.039216
LOWER IN inflammatory bowel disease0.039216
LOWER IN clostridium difficile colitis0.039216
humanized mouse0.038462
LOWER IN non c. diff diarrhea0.038462
LOWER IN clostridium difficile infection0.038462
non c. diff diarrhea0.038462
male0.038278
LOWER IN vancomycin0.037736
LOWER IN biopsy0.037736
LOWER IN biopsy site0.037736
clostridium difficile intestinal infectious disease0.036364
state of texas0.035714
LOWER IN metronidazole0.035714
LOWER IN rectum0.035714
balb/c0.035088
LOWER IN child0.032787
LOWER IN antibiotic0.032258
LOWER IN feces0.028571
Fraction of dbbact annotations with this term covered by the query
TermScore
ulcerative colitis0.888889
LOWER IN ulcerative colitis0.875000
LOWER IN colitis0.833333
colitis0.800000
clostridium difficile colitis0.666667
age<17 years0.500000
LOWER IN tnbs0.500000
tnbs0.500000
LOWER IN dnbs induced colitis0.500000
dnbs induced colitis0.500000
dss induced colitis0.500000
LOWER IN dss induced colitis0.500000
acute severe colitis0.500000
LOWER IN doxycycline0.500000
LOWER IN amoxicillin0.500000
before antibiotics0.500000
LOWER IN sulfasalazine0.500000
sulfasalazine0.500000
inflammatory bowel disease0.500000
LOWER IN inflammatory bowel disease0.500000
mild0.500000
LOWER IN severe0.500000
severe0.500000
LOWER IN mild0.500000
tucson0.500000
LOWER IN clostridium difficile colitis0.500000
LOWER IN crohn&#39;s disease0.363636
crohn's disease0.333333
atlanta0.333333
humanized mouse0.333333
rattus0.333333
wistar rat0.333333
LOWER IN non c. diff diarrhea0.333333
LOWER IN clostridium difficile infection0.333333
non c. diff diarrhea0.333333
LOWER IN vancomycin0.250000
LOWER IN biopsy0.250000
LOWER IN biopsy site0.250000
biopsy site0.250000
clostridium difficile infection0.250000
guangzhou city prefecture0.200000
sprague dawley0.200000
rat0.187500
clostridium difficile intestinal infectious disease0.166667
state of texas0.142857
czech republic0.142857
LOWER IN metronidazole0.142857
LOWER IN rectum0.142857
biopsy0.142857
balb/c0.125000
diarrhea0.125000
child0.111111
commonwealth of pennsylvania0.111111
obsolete_juvenile stage0.100000
rattus norvegicus0.100000
rectum0.100000
hospital0.100000
LOWER IN child0.083333
LOWER IN antibiotic0.076923
LOWER IN control0.064706
control0.063953
israel0.058824
c57bl/60.058824
feces0.049505
LOWER IN feces0.047619
state of california0.041667
mouse0.036364
research facility0.034965
homo sapiens0.034483
united states of america0.033195
mus musculus0.032258
china0.025806
male0.025000
adult0.024390
Fraction of annotations for the query sequences containing the term
TermScore
feces0.938776
homo sapiens0.714286
united states of america0.530612
ulcerative colitis0.448980
adult0.326531
china0.326531
child0.285714
research facility0.265306
control0.224490
LOWER IN control0.224490
rat0.204082
LOWER IN ulcerative colitis0.183673
sprague dawley0.163265
colitis0.142857
crohn's disease0.122449
LOWER IN colitis0.122449
rattus0.122449
LOWER IN crohn&#39;s disease0.081633
guangzhou city prefecture0.081633
clostridium difficile colitis0.081633
rattus norvegicus0.081633
male0.081633
state of california0.081633
commonwealth of pennsylvania0.081633
hospital0.081633
tucson0.081633
mus musculus0.061224
mouse0.061224
tnbs0.061224
acute severe colitis0.061224
inflammatory bowel disease0.061224
rectum0.061224
biopsy0.061224
biopsy site0.061224
clostridium difficile infection0.061224
obsolete_juvenile stage0.040816
age<17 years0.040816
atlanta0.040816
wistar rat0.040816
czech republic0.040816
israel0.040816
c57bl/60.040816
mild0.040816
LOWER IN severe0.040816
severe0.040816
LOWER IN mild0.040816
diarrhea0.040816
state of texas0.020408
balb/c0.020408
humanized mouse0.020408
clostridium difficile intestinal infectious disease0.020408
LOWER IN tnbs0.020408
LOWER IN dnbs induced colitis0.020408
dnbs induced colitis0.020408
dss induced colitis0.020408
LOWER IN dss induced colitis0.020408
LOWER IN doxycycline0.020408
LOWER IN metronidazole0.020408
LOWER IN amoxicillin0.020408
LOWER IN vancomycin0.020408
LOWER IN antibiotic0.020408
before antibiotics0.020408
LOWER IN sulfasalazine0.020408
sulfasalazine0.020408
LOWER IN biopsy0.020408
LOWER IN rectum0.020408
LOWER IN biopsy site0.020408
LOWER IN child0.020408
LOWER IN inflammatory bowel disease0.020408
LOWER IN feces0.020408
LOWER IN non c. diff diarrhea0.020408
LOWER IN clostridium difficile infection0.020408
LOWER IN clostridium difficile colitis0.020408
non c. diff diarrhea0.020408
Exp. ID User ID Description Date Region Flag Sequences
689amnon high in non c. diff diarrhea compared to clostridium difficile infection clostridium difficile colitis in diarrhea hospital adult tucson united states of america feces homo sapiens 2028-03-11v4No1 / 1
399amnon high in crohn's disease compared to ulcerative colitis in feces united states of america homo sapiens 2018-11-16v4No1 / 3
689amnon high in clostridium difficile infection clostridium difficile colitis compared to non c. diff diarrhea in diarrhea hospital adult tucson united states of america feces homo sapiens 2028-03-11v4No1 / 3
208amnonlower in TNBS induced colitis compared to controls ( high in control compared to colitis in mus musculus mouse feces united states of america state of texas balb/c )2017-10-06v4No1 / 4
325amnonhigher in c. diff infeceted humanized mice compared to non-infected controls ( high in clostridium difficile intestinal infectious disease clostridium difficile colitis compared to control in humanized mouse feces united states of america research facility )2018-04-29v4No1 / 4
779amnon high in ulcerative colitis compared to control in guangzhou city prefecture homo sapiens adult china feces 2021-04-28v4No1 / 5
410amnonhigher in biopsies of severe treatment naive ulcerative colitis patients compared to mild ( high in severe ulcerative colitis compared to mild in homo sapiens child united states of america biopsy biopsy site rectum )2018-11-22v4No1 / 5
394amnon high in ulcerative colitis compared to control in homo sapiens feces adult united states of america state of california 2018-11-06v4No1 / 8
221amnonhigher in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in sulfasalazine compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 11
659amnondominant ulcerative colitis, acute severe colitis, homo sapiens, child, feces2020-09-19v4No1 / 16
659amnon high in before antibiotics compared to doxycycline metronidazole amoxicillin vancomycin antibiotic in ulcerative colitis acute severe colitis homo sapiens child feces 2020-09-19v4No1 / 16
395amnonhigher in kids with ibd compared to healthy donors ( high in child ulcerative colitis inflammatory bowel disease crohn's disease compared to control in homo sapiens feces united states of america commonwealth of pennsylvania )2018-11-13v4No1 / 16
410amnonlower in severe treatment naive ulcerative colitis patients compared to mild ( high in severe ulcerative colitis compared to mild in homo sapiens child united states of america feces )2018-11-22v4No1 / 18
689amnoncommon clostridium difficile infection, clostridium difficile colitis, hospital, adult, tucson, united states of america, feces, homo sapiens2028-03-11v4No1 / 19
292amnondominant homo sapiens, adult, feces, ulcerative colitis, china2018-02-05v4No1 / 20
394amnondominant homo sapiens, feces, adult, united states of america, state of california, ulcerative colitis2018-11-06v4No1 / 20
442amnonhigh freq. in tnbs induced colitis in rat feces (dominant rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 21
297amnon high in crohn's disease ulcerative colitis compared to control in homo sapiens feces obsolete_juvenile stage age<17 years united states of america atlanta child 2018-02-12v4No1 / 22
395amnondominant homo sapiens, feces, united states of america, commonwealth of pennsylvania, child, inflammatory bowel disease, crohn's disease, ulcerative colitis2018-11-14v4No1 / 22
689amnondominant clostridium difficile infection, clostridium difficile colitis, hospital, adult, tucson, united states of america, feces, homo sapiens2028-03-11v4No1 / 22
779amnondominant ulcerative colitis, feces, china, adult, homo sapiens, guangzhou city prefecture2021-04-28v4No1 / 23
779amnoncommon ulcerative colitis, feces, china, adult, homo sapiens, guangzhou city prefecture2021-04-28v4No1 / 25
395amnoncommon homo sapiens, feces, united states of america, commonwealth of pennsylvania, child, ulcerative colitis, inflammatory bowel disease, crohn's disease2018-11-14v4No1 / 25
410amnonlower in biopsies of severe treatment naive ulcerative colitis patients compared to mild ( high in mild compared to severe ulcerative colitis in homo sapiens child united states of america biopsy biopsy site rectum )2018-11-22v4No1 / 26
659amnoncommon ulcerative colitis, acute severe colitis, homo sapiens, child, feces2020-09-19v4No1 / 27
779amnon high in control compared to ulcerative colitis in guangzhou city prefecture homo sapiens adult china feces 2021-04-28v4No1 / 28
292amnon high in crohn's disease ulcerative colitis compared to control in homo sapiens adult feces china 2018-02-05v4No1 / 32
399amnon high in ulcerative colitis compared to control in feces united states of america homo sapiens 2018-11-16v4No1 / 36
297amnon high in control compared to crohn's disease ulcerative colitis in homo sapiens feces obsolete_juvenile stage age<17 years united states of america atlanta child 2018-02-12v4No1 / 38
221amnonlower in induced colitis treated with Sulfasalazine compared to no Sulfasalazine in rat feces ( high in colitis compared to sulfasalazine in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 44
399amnon high in ulcerative colitis compared to crohn's disease in feces united states of america homo sapiens 2018-11-16v4No1 / 47
442amnonlower in tnbs induced colitis compared to controls ( high in control compared to tnbs colitis in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 49
221amnonhigher in control compared to tnbs induced colitis in rat feces ( high in control compared to colitis in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 49
292amnoncommon homo sapiens, adult, feces, ulcerative colitis, china2018-02-05v4No1 / 53
394amnoncommon homo sapiens, feces, adult, united states of america, state of california, ulcerative colitis2018-11-06v4No1 / 56
442amnonhigher in tnbs induced colitis compared to controls ( high in tnbs colitis compared to control in rattus norvegicus rat sprague dawley male research facility feces china )2019-01-06v4No1 / 63
221amnonlower in control compared to tnbs induced colitis in rat feces ( high in colitis compared to control in rattus sprague dawley rat feces research facility china )2017-10-25v4No1 / 68
394amnon high in control compared to ulcerative colitis in homo sapiens feces adult united states of america state of california 2018-11-06v4No1 / 71
334amnonhigher in dss induced colitis compared to controls ( high in dss induced colitis colitis compared to control in mus musculus mouse feces israel research facility c57bl/6 )2018-05-15v4No1 / 83
395amnonlower in kids with ibd compared to healthy donors ( high in control compared to child ulcerative colitis inflammatory bowel disease crohn's disease in homo sapiens feces united states of america commonwealth of pennsylvania )2018-11-13v4No1 / 107
410amnonlower in severe treatment naive ulcerative colitis patients compared to mild ( high in mild compared to severe ulcerative colitis in homo sapiens child united states of america feces )2018-11-22v4No1 / 110
410amnonlower in feces compared to rectal biopsies in children with treatment naive uc ( high in rectum biopsy biopsy site compared to feces in homo sapiens child united states of america ulcerative colitis )2018-11-22v4No1 / 118
410amnonhigher in feces compared to rectal biopsies in children with treatment naive uc ( high in feces compared to biopsy rectum biopsy site in homo sapiens child united states of america ulcerative colitis )2018-11-22v4No1 / 126
334amnonlower in dss induced colitis compared to controls ( high in control compared to dss induced colitis colitis in mus musculus mouse feces israel research facility c57bl/6 )2018-05-15v4No1 / 153
358amnonhigher in dnbs induced colitis compared to controls in rat feces ( high in dnbs induced colitis colitis compared to control in rattus rat research facility wistar rat czech republic feces )2018-08-19v4No1 / 154
292amnon high in control compared to crohn's disease ulcerative colitis in homo sapiens adult feces china 2018-02-05v4No1 / 161
399amnon high in control compared to ulcerative colitis in feces united states of america homo sapiens 2018-11-16v4No1 / 180
442amnoncommon in tnbs induced colitis in rat feces (common rattus norvegicus, rat, sprague dawley, male, research facility, feces, tnbs, colitis, china)2019-01-06v4No1 / 360
358amnonlower in dnbs induced colitis compared to controls in rat feces ( high in control compared to dnbs induced colitis colitis in rattus rat research facility wistar rat czech republic feces )2018-08-19v4No1 / 754

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