Summary for ontology term: colon

Number of annotations with term: 93

Annotations:

common ontology terms
term enrichment score
TermScore
colon0.883647
texas0.330935
LOWER IN colon0.290300
caecum0.223330
rectum0.209424
mus musculus0.176656
age 8 weeks0.162602
right colon0.155844
LOWER IN caecum0.150470
c57bl/60.150235
research facility0.144433
ovis aries0.136752
mouse0.122748
termite0.114286
reticulitermes flaviceps0.114286
ileum0.114286
nile tilapia0.114286
gryllinae0.114286
field cricket0.114286
male0.114286
biopsy0.111111
oreochromis niloticus0.108108
charles river laboratories0.108108
midgut0.097561
coturnix coturnix0.097087
jiangxi province0.092593
LOWER IN feces0.089485
taconic farms0.088496
united states of america0.088151
digestive system0.087719
canada0.085837
sweden0.085106
jackson laboratories0.084746
hunan province0.081301
LOWER IN rectum0.080808
LOWER IN fasting0.080268
LOWER IN stomach0.080000
age 30 days0.079208
dairy0.079208
LOWER IN ileum0.079208
fasting0.079208
liolaemus ruibali0.079208
sigmoid colon0.079208
children0.079208
pikas0.079208
quasipaa spinosa0.079208
giant spiny frog0.079208
mongolian sheep0.079208
centrocercus urophasianus0.079208
greater sage-grouse0.079208
state of wyoming0.079208
stomach0.076190
argentina0.076190
terminal ileum0.076190
ochotonidae0.076190
kingdom of norway0.073394
frog0.066116
bird0.066116
australia0.065574
gastrointestinal system0.060606
quail0.060606
anaxyrus terrestris0.060606
southern toad0.060606
obsolete_juvenile stage0.060150
italy0.060150
dog0.060150
LOWER IN right colon0.059701
western diet0.058824
hindgut0.057143
LOWER IN late timepoints0.056338
early timepoints0.056338
china0.055834
canis lupus familiaris0.053691
late timepoints0.052632
LOWER IN early timepoints0.052632
mouse chow0.048780
high fat diet0.047619
diet0.046512
ruminant reticulum0.041667
omasum0.041667
LOWER IN rumen0.041667
mouse strain o1290.041237
LOWER IN ruminant reticulum0.041237
LOWER IN omasum0.041237
LOWER IN wood diet0.041237
wood diet0.041237
small intestine0.041237
LOWER IN small intestine0.041237
eublepharis macularius0.041237
leopard gecko0.041237
common quail0.041237
cecum0.041237
LOWER IN duodenum0.039604
biopsy site0.039604
duodenum0.039216
rumen0.038095
feces0.035907
homo sapiens0.031270
mulch diet0.021053
LOWER IN mulch diet0.021053
Fraction of dbbact annotations with this term covered by the query
TermScore
colon0.947368
LOWER IN colon0.928571
LOWER IN rectum0.666667
ruminant reticulum0.666667
omasum0.666667
LOWER IN rumen0.666667
LOWER IN caecum0.600000
LOWER IN fasting0.600000
LOWER IN stomach0.571429
rectum0.555556
age 30 days0.500000
dairy0.500000
mouse strain o1290.500000
LOWER IN ruminant reticulum0.500000
LOWER IN omasum0.500000
texas0.500000
termite0.500000
reticulitermes flaviceps0.500000
mulch diet0.500000
LOWER IN wood diet0.500000
wood diet0.500000
LOWER IN mulch diet0.500000
gastrointestinal system0.500000
esophagus0.500000
ileum0.500000
LOWER IN esophagus0.500000
LOWER IN ileum0.500000
fasting0.500000
liolaemus ruibali0.500000
small intestine0.500000
LOWER IN small intestine0.500000
sigmoid colon0.500000
children0.500000
pikas0.500000
eublepharis macularius0.500000
leopard gecko0.500000
nile tilapia0.500000
quail0.500000
coturnix coturnix0.500000
anaxyrus terrestris0.500000
southern toad0.500000
LOWER IN digestive system0.500000
LOWER IN frog0.500000
LOWER IN quasipaa spinosa0.500000
LOWER IN giant spiny frog0.500000
quasipaa spinosa0.500000
giant spiny frog0.500000
common quail0.500000
mongolian sheep0.500000
cecum0.500000
gryllinae0.500000
field cricket0.500000
chemically defined diet0.500000
LOWER IN cat chow0.500000
cat chow0.500000
LOWER IN chemically defined diet0.500000
male0.500000
centrocercus urophasianus0.500000
greater sage-grouse0.500000
state of wyoming0.500000
biopsy0.400000
LOWER IN right colon0.400000
right colon0.400000
ovis aries0.333333
stomach0.333333
argentina0.333333
LOWER IN hindgut0.333333
terminal ileum0.333333
ochotonidae0.333333
age 8 weeks0.333333
oreochromis niloticus0.333333
LOWER IN taconic farms0.333333
jiangxi province0.333333
charles river laboratories0.333333
LOWER IN diet0.333333
LOWER IN western diet0.333333
western diet0.333333
caecum0.318182
LOWER IN feces0.266667
kingdom of norway0.250000
LOWER IN duodenum0.250000
hindgut0.250000
taconic farms0.250000
LOWER IN jackson laboratories0.250000
LOWER IN research facility0.250000
biopsy site0.250000
left colon0.250000
LOWER IN left colon0.250000
duodenum0.222222
LOWER IN late timepoints0.222222
early timepoints0.222222
jackson laboratories0.200000
midgut0.200000
rumen0.166667
hunan province0.166667
LOWER IN mouth0.142857
late timepoints0.142857
LOWER IN early timepoints0.142857
frog0.142857
bird0.142857
Fraction of annotations for the query sequences containing the term
TermScore
colon0.827957
research facility0.580645
united states of america0.494624
mus musculus0.301075
texas0.247312
mouse0.247312
caecum0.172043
LOWER IN colon0.172043
c57bl/60.172043
china0.139785
rectum0.129032
age 8 weeks0.107527
canada0.107527
digestive system0.107527
right colon0.096774
ovis aries0.086022
LOWER IN caecum0.086022
homo sapiens0.086022
termite0.064516
reticulitermes flaviceps0.064516
ileum0.064516
feces0.064516
biopsy0.064516
oreochromis niloticus0.064516
nile tilapia0.064516
australia0.064516
gryllinae0.064516
field cricket0.064516
midgut0.064516
male0.064516
charles river laboratories0.064516
sweden0.064516
LOWER IN feces0.053763
jackson laboratories0.053763
taconic farms0.053763
coturnix coturnix0.053763
jiangxi province0.053763
hunan province0.053763
age 30 days0.043011
obsolete_juvenile stage0.043011
italy0.043011
dairy0.043011
LOWER IN rectum0.043011
kingdom of norway0.043011
LOWER IN stomach0.043011
stomach0.043011
LOWER IN ileum0.043011
fasting0.043011
LOWER IN fasting0.043011
liolaemus ruibali0.043011
argentina0.043011
terminal ileum0.043011
sigmoid colon0.043011
children0.043011
ochotonidae0.043011
pikas0.043011
quasipaa spinosa0.043011
giant spiny frog0.043011
frog0.043011
mongolian sheep0.043011
canis lupus familiaris0.043011
dog0.043011
bird0.043011
centrocercus urophasianus0.043011
greater sage-grouse0.043011
state of wyoming0.043011
gastrointestinal system0.032258
hindgut0.032258
LOWER IN late timepoints0.032258
early timepoints0.032258
LOWER IN right colon0.032258
late timepoints0.032258
LOWER IN early timepoints0.032258
quail0.032258
anaxyrus terrestris0.032258
southern toad0.032258
diet0.032258
mouse chow0.032258
western diet0.032258
high fat diet0.032258
rumen0.021505
ruminant reticulum0.021505
omasum0.021505
mouse strain o1290.021505
LOWER IN rumen0.021505
LOWER IN ruminant reticulum0.021505
LOWER IN omasum0.021505
LOWER IN wood diet0.021505
wood diet0.021505
duodenum0.021505
LOWER IN duodenum0.021505
small intestine0.021505
LOWER IN small intestine0.021505
eublepharis macularius0.021505
leopard gecko0.021505
common quail0.021505
cecum0.021505
biopsy site0.021505
mulch diet0.010753
LOWER IN mulch diet0.010753
Exp. ID User ID Description Date Region Flag Sequences
14amnonhighest in feces compared to colon ( high in feces compared to colon in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 1
108amnonquail mitochondria (other research facility, texas, united states of america, colon, quail, coturnix coturnix)2017-04-07v4No1 / 1
409amnon high in right colon compared to left colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / 1
315amnonlower in captive grown compared to wild frogs ( high in wild compared to research facility in hunan province jiangxi province quasipaa spinosa giant spiny frog frog colon digestive system china )2018-04-10v4No1 / 3
108amnondecreases during fasting in nile tilapia colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-07v4No1 / 4
301amnon high in duodenum ileum compared to colon rectum in canis lupus familiaris dog united states of america 2018-03-05v4No1 / 5
108amnonhighfreq research facility, texas, united states of america, colon, oreochromis niloticus, nile tilapia2017-04-07v4No1 / 6
108amnonhighfreq research facility, texas, united states of america, colon, quail, coturnix coturnix2017-04-07v4No1 / 6
279amnonhighfreq ochotonidae, pikas, colon, caecum, china2018-01-24v4No1 / 10
108amnon high in colon compared to caecum in research facility texas united states of america mus musculus mouse 2017-04-07v4No1 / 13
315amnonhigh freq. in frog gut (highfreq hunan province, jiangxi province, quasipaa spinosa, giant spiny frog, frog, colon, digestive system, china)2018-04-10v4No1 / 13
111amnonhighfreq mongolian sheep, ovis aries, rectum, ileum, cecum, colon, china2017-04-09v4No1 / 13
494amnonhighfreq mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, western diet, high fat diet2019-02-27v4No1 / 14
107amnonhighfreq research facility, texas, united states of america, colon, eublepharis macularius, leopard gecko2017-04-07v4No1 / 15
494amnonhighfreq mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, mouse chow2019-02-27v4No1 / 15
409amnon high in left colon compared to right colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / 15
363amnonhighfreq ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-29v4No1 / 16
416amnonhighfreq termite, reticulitermes flaviceps, colon, research facility, united states of america2018-11-30v4No1 / 16
19amnonhigh freq in biopsies of children (IBD study) (highfreq rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-14v4No1 / 16
108amnonhighfreq research facility, texas, united states of america, colon, anaxyrus terrestris, southern toad2017-04-07v4No1 / 16
324amnonhighfreq australia, gryllinae, field cricket, midgut, colon, digestive system2018-04-27v4No1 / 16
324amnonhighfreq australia, gryllinae, field cricket, midgut, colon, digestive system, research facility2018-04-27v4No1 / 16
538amnonhighfreq mus musculus, mouse, research facility, c57bl/6, age 8 weeks, canada, colon, right colon, taconic farms2019-07-30v4No1 / 17
538amnonhighfreq mus musculus, mouse, research facility, c57bl/6, age 8 weeks, canada, jackson laboratories, colon, right colon2019-07-30v4No1 / 18
324amnonhiger in crickets fed chemically defined diet compared to cat chow diet ( high in chemically defined diet diet compared to cat chow in australia gryllinae field cricket midgut colon digestive system research facility )2018-04-27v4No1 / 19
301amnonhighfreq canis lupus familiaris, dog, united states of america, colon2018-03-05v4No1 / 19
558amnonhighfreq bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming, colon2019-09-20v4No1 / 19
538amnon high in feces compared to colon right colon in mus musculus mouse research facility c57bl/6 jackson laboratories age 8 weeks canada 2019-07-29v4No1 / 22
71amnonhighfreq liolaemus ruibali, colon, hindgut, argentina, research facility2017-02-25v4No1 / 23
13amnon high in esophagus stomach duodenum ileum mouth compared to caecum colon rectum feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 25
108amnonhighfreq research facility, texas, united states of america, colon, mus musculus, mouse2017-04-07v4No1 / 25
538amnon high in feces compared to colon right colon in mus musculus mouse research facility c57bl/6 age 8 weeks canada taconic farms 2019-07-29v4No1 / 27
108amnonincreases during fasting in mouse colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 31
315amnonhigher in captive grown compared to wild frogs ( high in research facility compared to wild in hunan province jiangxi province quasipaa spinosa giant spiny frog frog colon digestive system china )2018-04-10v4No1 / 31
19amnonhigher in CD compared to control in biopsies ( high in crohn's disease compared to control in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-14v4No1 / 34
108amnoncommon research facility, texas, united states of america, colon, quail, coturnix coturnix2017-04-07v4No1 / 35
19amnoncommon in biopsies of children (IBD study) (common rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-14v4No1 / 40
108amnoncommon research facility, texas, united states of america, colon, oreochromis niloticus, nile tilapia2017-04-07v4No1 / 43
108amnonincreases during fasting in southern frog colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon anaxyrus terrestris southern toad )2017-04-07v4No1 / 45
538amnon high in colon right colon compared to feces in mus musculus mouse research facility c57bl/6 age 8 weeks canada taconic farms 2019-07-29v4No1 / 51
324amnonlower in crickets fed chemically defined diet compared to cat chow diet ( high in cat chow diet compared to chemically defined diet in australia gryllinae field cricket midgut colon digestive system research facility )2018-04-27v4No1 / 51
416amnon high in fasting compared to wood diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-30v4No1 / 52
279amnon high in small intestine stomach compared to caecum colon in ochotonidae pikas china 2018-01-24v4No1 / 53
416amnon high in wood diet compared to fasting in termite reticulitermes flaviceps colon research facility united states of america 2018-11-30v4No1 / 59
108amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 59
558amnoncommon bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming, colon2019-09-20v4No1 / 66
71amnon high in small intestine stomach compared to feces hindgut colon in liolaemus ruibali argentina research facility 2017-02-25v4No1 / 67
194amnon high in colon ileum compared to feces in homo sapiens kingdom of norway 2017-09-07v4No1 / 67
8amnon high in stomach compared to colon in mus musculus mouse strain o129 kingdom of norway 2016-10-21v4No1 / 68
324amnoncommon australia, gryllinae, field cricket, midgut, colon, digestive system, research facility2018-04-27v4No1 / 79
301amnon high in colon rectum compared to duodenum ileum in canis lupus familiaris dog united states of america 2018-03-05v4No1 / 79
108amnon high in caecum compared to colon in research facility texas united states of america oreochromis niloticus nile tilapia 2017-04-07v4No1 / 80
108amnonincreases during fasting in nile tilapia colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-07v4No1 / 81
494amnon high in diet western diet high fat diet compared to mouse chow in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden colon 2019-02-27v4No1 / 85
108amnon high in caecum compared to colon in research facility texas united states of america mus musculus mouse 2017-04-07v4No1 / 86
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-29v4No1 / 94
558amnon high in colon compared to caecum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 97
363amnon high in caecum colon rectum compared to rumen ruminant reticulum omasum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 101
108amnon high in colon compared to caecum in research facility texas united states of america oreochromis niloticus nile tilapia 2017-04-07v4No1 / 103
301amnoncommon canis lupus familiaris, dog, united states of america, colon2018-03-05v4No1 / 105
538amnon high in taconic farms compared to jackson laboratories in mus musculus mouse research facility c57bl/6 age 8 weeks canada colon right colon 2019-07-29v4No1 / 108
416amnon high in wood diet compared to mulch diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-30v4No1 / 115
107amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 120
538amnoncommon mus musculus, mouse, research facility, c57bl/6, age 8 weeks, canada, colon, right colon, taconic farms2019-07-30v4No1 / 130
8amnon high in colon compared to stomach in mus musculus mouse strain o129 kingdom of norway 2016-10-21v4No1 / 132
108amnoncommon research facility, texas, united states of america, colon, anaxyrus terrestris, southern toad2017-04-07v4No1 / 132
315amnoncommon in frog gut (common hunan province, jiangxi province, quasipaa spinosa, giant spiny frog, frog, colon, digestive system, china)2018-04-10v4No1 / 138
538amnon high in colon right colon compared to feces in mus musculus mouse research facility c57bl/6 jackson laboratories age 8 weeks canada 2019-07-29v4No1 / 140
71amnoncommon liolaemus ruibali, colon, hindgut, argentina, research facility2017-02-25v4No1 / 144
279amnoncommon ochotonidae, pikas, colon, caecum, china2018-01-24v4No1 / 146
108amnon high in colon compared to caecum in research facility texas united states of america coturnix coturnix common quail 2017-04-07v4No1 / 157
108amnoncommon research facility, texas, united states of america, colon, mus musculus, mouse2017-04-07v4No1 / 158
494amnoncommon mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, western diet, high fat diet2019-02-27v4No1 / 161
324amnoncommon australia, gryllinae, field cricket, midgut, colon, digestive system2018-04-27v4No1 / 168
194amnon high in feces compared to colon ileum in homo sapiens kingdom of norway 2017-09-07v4No1 / 169
538amnon high in jackson laboratories compared to taconic farms in mus musculus mouse research facility c57bl/6 age 8 weeks canada colon right colon 2019-07-29v4No1 / 172
107amnoncommon research facility, texas, united states of america, colon, eublepharis macularius, leopard gecko2017-04-07v4No1 / 183
538amnoncommon mus musculus, mouse, research facility, c57bl/6, age 8 weeks, canada, jackson laboratories, colon, right colon2019-07-30v4No1 / 186
71amnon high in feces colon hindgut compared to small intestine stomach in liolaemus ruibali argentina research facility 2017-02-25v4No1 / 255
494amnoncommon mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, mouse chow2019-02-27v4No1 / 275
494amnon high in mouse chow compared to diet western diet high fat diet in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden colon 2019-02-27v4No1 / 293
111amnon high in rumen ruminant reticulum omasum compared to rectum ileum caecum colon in mongolian sheep ovis aries china 2017-04-09v4No1 / 294
13amnon high in caecum colon rectum feces compared to esophagus stomach duodenum ileum mouth in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 316
111amnoncommon mongolian sheep, ovis aries, rectum, ileum, cecum, colon, china2017-04-09v4No1 / 330
558amnon high in caecum compared to colon in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 359
363amnon high in rumen ruminant reticulum omasum compared to caecum colon rectum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 360
108amnon high in caecum compared to colon in research facility texas united states of america coturnix coturnix common quail 2017-04-07v4No1 / 380
19amnonhigher in controls compared to CD in biopsies ( high in control compared to crohn's disease in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-14v4No1 / 459
111amnon high in rectum caecum ileum colon compared to rumen ruminant reticulum omasum in mongolian sheep ovis aries china 2017-04-09v4No1 / 464
315amnonhigher in frog pond water compared to frog gut ( high in water fresh water compared to digestive system colon frog quasipaa spinosa giant spiny frog in jiangxi province hunan province china )2018-04-10v4No1 / 505
416amnoncommon termite, reticulitermes flaviceps, colon, research facility, united states of america2018-11-30v4No1 / 511
279amnon high in caecum colon compared to stomach small intestine in ochotonidae pikas china 2018-01-24v4No1 / 634
416amnon high in mulch diet compared to wood diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-30v4No1 / 681

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