Summary for ontology term: colon

Number of annotations with term: 79

Annotations:

common ontology terms
term enrichment score
TermScore
colon0.885163
texas0.368000
LOWER IN colon0.279024
rectum0.238569
caecum0.228137
ovis aries0.155340
LOWER IN caecum0.152838
mus musculus0.147541
ileum0.134078
termite0.131868
reticulitermes flaviceps0.131868
nile tilapia0.131868
gryllinae0.131868
field cricket0.131868
research facility0.131371
biopsy0.127660
oreochromis niloticus0.123711
charles river laboratories0.123711
coturnix coturnix0.112360
midgut0.110092
jiangxi province0.106383
hunan province0.096154
sweden0.094488
LOWER IN rectum0.094118
digestive system0.093458
LOWER IN fasting0.093385
LOWER IN stomach0.093023
LOWER IN ileum0.093023
age 30 days0.091954
dairy0.091954
fasting0.091954
liolaemus ruibali0.091954
terminal ileum0.091954
sigmoid colon0.091954
children0.091954
pikas0.091954
quasipaa spinosa0.091954
giant spiny frog0.091954
mongolian sheep0.091954
mouse0.090592
stomach0.087912
argentina0.087912
ochotonidae0.087912
kingdom of norway0.084211
united states of america0.084189
frog0.074766
australia0.073620
c57bl/60.073620
gastrointestinal system0.070588
quail0.070588
anaxyrus terrestris0.070588
southern toad0.070588
italy0.069565
dog0.069565
western diet0.068182
obsolete_juvenile stage0.067227
hindgut0.065934
LOWER IN late timepoints0.064865
early timepoints0.064865
LOWER IN feces0.064516
male0.062176
china0.061081
canis lupus familiaris0.061069
late timepoints0.060000
LOWER IN early timepoints0.060000
mouse chow0.055046
high fat diet0.053571
diet0.052863
ruminant reticulum0.048780
omasum0.048780
LOWER IN rumen0.048780
mouse strain o1290.048193
LOWER IN ruminant reticulum0.048193
LOWER IN omasum0.048193
LOWER IN wood diet0.048193
wood diet0.048193
small intestine0.048193
LOWER IN small intestine0.048193
eublepharis macularius0.048193
leopard gecko0.048193
common quail0.048193
cecum0.048193
LOWER IN duodenum0.046512
duodenum0.045977
biopsy site0.045977
rumen0.044944
homo sapiens0.034960
feces0.029963
mulch diet0.024691
LOWER IN mulch diet0.024691
esophagus0.024691
LOWER IN esophagus0.024691
LOWER IN digestive system0.024691
LOWER IN frog0.024691
LOWER IN quasipaa spinosa0.024691
LOWER IN giant spiny frog0.024691
chemically defined diet0.024691
LOWER IN cat chow0.024691
cat chow0.024691
LOWER IN chemically defined diet0.024691
Fraction of dbbact annotations with this term covered by the query
TermScore
colon0.941176
LOWER IN colon0.916667
LOWER IN rectum0.666667
ruminant reticulum0.666667
omasum0.666667
LOWER IN rumen0.666667
LOWER IN fasting0.600000
LOWER IN stomach0.571429
ileum0.571429
LOWER IN ileum0.571429
rectum0.555556
LOWER IN caecum0.555556
age 30 days0.500000
dairy0.500000
mouse strain o1290.500000
LOWER IN ruminant reticulum0.500000
LOWER IN omasum0.500000
termite0.500000
reticulitermes flaviceps0.500000
mulch diet0.500000
LOWER IN wood diet0.500000
wood diet0.500000
LOWER IN mulch diet0.500000
gastrointestinal system0.500000
esophagus0.500000
LOWER IN esophagus0.500000
fasting0.500000
liolaemus ruibali0.500000
small intestine0.500000
LOWER IN small intestine0.500000
terminal ileum0.500000
sigmoid colon0.500000
children0.500000
pikas0.500000
texas0.500000
eublepharis macularius0.500000
leopard gecko0.500000
nile tilapia0.500000
quail0.500000
coturnix coturnix0.500000
anaxyrus terrestris0.500000
southern toad0.500000
quasipaa spinosa0.500000
giant spiny frog0.500000
LOWER IN digestive system0.500000
LOWER IN frog0.500000
LOWER IN quasipaa spinosa0.500000
LOWER IN giant spiny frog0.500000
common quail0.500000
mongolian sheep0.500000
cecum0.500000
gryllinae0.500000
field cricket0.500000
chemically defined diet0.500000
LOWER IN cat chow0.500000
cat chow0.500000
LOWER IN chemically defined diet0.500000
biopsy0.400000
ovis aries0.333333
stomach0.333333
argentina0.333333
LOWER IN hindgut0.333333
ochotonidae0.333333
oreochromis niloticus0.333333
jiangxi province0.333333
LOWER IN research facility0.333333
charles river laboratories0.333333
LOWER IN diet0.333333
LOWER IN western diet0.333333
western diet0.333333
caecum0.285714
LOWER IN duodenum0.285714
kingdom of norway0.250000
duodenum0.250000
hindgut0.250000
biopsy site0.250000
left colon0.250000
LOWER IN right colon0.250000
right colon0.250000
LOWER IN left colon0.250000
LOWER IN late timepoints0.222222
early timepoints0.222222
LOWER IN feces0.214286
rumen0.200000
hunan province0.200000
midgut0.200000
LOWER IN wild0.166667
LOWER IN mouth0.142857
late timepoints0.142857
LOWER IN early timepoints0.142857
frog0.142857
sweden0.125000
italy0.111111
crohn's disease0.111111
LOWER IN crohn's disease0.111111
wild0.111111
dog0.111111
mus musculus0.109091
obsolete_juvenile stage0.100000
mouse chow0.100000
Fraction of annotations for the query sequences containing the term
TermScore
colon0.835443
research facility0.556962
united states of america0.531646
texas0.291139
mus musculus0.227848
caecum0.189873
LOWER IN colon0.164557
china0.164557
mouse0.164557
rectum0.151899
digestive system0.126582
ovis aries0.101266
homo sapiens0.101266
LOWER IN caecum0.088608
termite0.075949
reticulitermes flaviceps0.075949
ileum0.075949
biopsy0.075949
oreochromis niloticus0.075949
nile tilapia0.075949
australia0.075949
gryllinae0.075949
field cricket0.075949
midgut0.075949
c57bl/60.075949
male0.075949
charles river laboratories0.075949
sweden0.075949
coturnix coturnix0.063291
hunan province0.063291
jiangxi province0.063291
age 30 days0.050633
obsolete_juvenile stage0.050633
italy0.050633
dairy0.050633
LOWER IN rectum0.050633
kingdom of norway0.050633
LOWER IN stomach0.050633
stomach0.050633
feces0.050633
LOWER IN ileum0.050633
fasting0.050633
LOWER IN fasting0.050633
liolaemus ruibali0.050633
argentina0.050633
terminal ileum0.050633
sigmoid colon0.050633
children0.050633
ochotonidae0.050633
pikas0.050633
quasipaa spinosa0.050633
giant spiny frog0.050633
frog0.050633
mongolian sheep0.050633
canis lupus familiaris0.050633
dog0.050633
gastrointestinal system0.037975
LOWER IN feces0.037975
hindgut0.037975
LOWER IN late timepoints0.037975
early timepoints0.037975
late timepoints0.037975
LOWER IN early timepoints0.037975
quail0.037975
anaxyrus terrestris0.037975
southern toad0.037975
diet0.037975
mouse chow0.037975
western diet0.037975
high fat diet0.037975
rumen0.025316
ruminant reticulum0.025316
omasum0.025316
mouse strain o1290.025316
LOWER IN rumen0.025316
LOWER IN ruminant reticulum0.025316
LOWER IN omasum0.025316
LOWER IN wood diet0.025316
wood diet0.025316
duodenum0.025316
LOWER IN duodenum0.025316
small intestine0.025316
LOWER IN small intestine0.025316
eublepharis macularius0.025316
leopard gecko0.025316
common quail0.025316
cecum0.025316
biopsy site0.025316
mulch diet0.012658
LOWER IN mulch diet0.012658
mouth0.012658
esophagus0.012658
LOWER IN mouth0.012658
LOWER IN esophagus0.012658
LOWER IN hindgut0.012658
crohn's disease0.012658
LOWER IN control0.012658
control0.012658
LOWER IN crohn's disease0.012658
LOWER IN wild0.012658
Exp. ID User ID Description Date Sequences
14amnonhighest in feces compared to colon ( high in feces compared to colon in mus musculus united states of america gastrointestinal system )2016-11-081 / 1
108amnonquail mitochondria (other research facility, texas, united states of america, colon, quail, coturnix coturnix)2017-04-071 / 1
409amnon high in right colon compared to left colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-221 / 1
315amnonlower in captive grown compared to wild frogs ( high in wild compared to research facility in china hunan province jiangxi province quasipaa spinosa giant spiny frog frog colon digestive system )2018-04-101 / 3
108amnondecreases during fasting in nile tilapia colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-071 / 4
301amnon high in duodenum ileum compared to colon rectum in canis lupus familiaris dog united states of america 2018-03-051 / 5
108amnonhighfreq research facility, texas, united states of america, colon, oreochromis niloticus, nile tilapia2017-04-071 / 6
108amnonhighfreq research facility, texas, united states of america, colon, quail, coturnix coturnix2017-04-071 / 6
279amnonhighfreq china, ochotonidae, pikas, colon, caecum2018-01-241 / 10
108amnon high in colon compared to caecum in research facility texas united states of america mus musculus mouse 2017-04-071 / 13
315amnonhigh freq. in frog gut (highfreq china, hunan province, jiangxi province, quasipaa spinosa, giant spiny frog, frog, colon, digestive system)2018-04-101 / 13
111amnonhighfreq mongolian sheep, china, ovis aries, rectum, ileum, cecum, colon2017-04-091 / 13
494amnonhighfreq mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, western diet, high fat diet2019-02-271 / 14
107amnonhighfreq research facility, texas, united states of america, colon, eublepharis macularius, leopard gecko2017-04-071 / 15
494amnonhighfreq mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, mouse chow2019-02-271 / 15
409amnon high in left colon compared to right colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-221 / 15
363amnonhighfreq ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-291 / 16
416amnonhighfreq termite, reticulitermes flaviceps, colon, research facility, united states of america2018-11-301 / 16
19amnonhigh freq in biopsies of children (IBD study) (highfreq rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-141 / 16
108amnonhighfreq research facility, texas, united states of america, colon, anaxyrus terrestris, southern toad2017-04-071 / 16
324amnonhighfreq australia, gryllinae, field cricket, midgut, colon, digestive system2018-04-271 / 16
324amnonhighfreq australia, gryllinae, field cricket, midgut, colon, digestive system, research facility2018-04-271 / 16
324amnonhiger in crickets fed chemically defined diet compared to cat chow diet ( high in chemically defined diet diet compared to cat chow in australia gryllinae field cricket midgut colon digestive system research facility )2018-04-271 / 19
301amnonhighfreq canis lupus familiaris, dog, united states of america, colon2018-03-051 / 19
71amnonhighfreq liolaemus ruibali, colon, hindgut, argentina, research facility2017-02-251 / 23
13amnon high in mouth esophagus stomach duodenum ileum compared to caecum colon rectum feces in mus musculus united states of america gastrointestinal system 2016-11-081 / 25
108amnonhighfreq research facility, texas, united states of america, colon, mus musculus, mouse2017-04-071 / 25
108amnonincreases during fasting in mouse colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-071 / 31
315amnonhigher in captive grown compared to wild frogs ( high in research facility compared to wild in china hunan province jiangxi province quasipaa spinosa giant spiny frog frog colon digestive system )2018-04-101 / 31
19amnonhigher in CD compared to control in biopsies ( high in crohn's disease compared to control in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-141 / 34
108amnoncommon research facility, texas, united states of america, colon, quail, coturnix coturnix2017-04-071 / 35
19amnoncommon in biopsies of children (IBD study) (common rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-141 / 40
108amnoncommon research facility, texas, united states of america, colon, oreochromis niloticus, nile tilapia2017-04-071 / 43
108amnonincreases during fasting in southern frog colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon anaxyrus terrestris southern toad )2017-04-071 / 45
324amnonlower in crickets fed chemically defined diet compared to cat chow diet ( high in cat chow diet compared to chemically defined diet in australia gryllinae field cricket midgut colon digestive system research facility )2018-04-271 / 51
416amnon high in fasting compared to wood diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-301 / 52
279amnon high in small intestine stomach compared to caecum colon in china ochotonidae pikas 2018-01-241 / 53
416amnon high in wood diet compared to fasting in termite reticulitermes flaviceps colon research facility united states of america 2018-11-301 / 59
108amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-071 / 59
71amnon high in small intestine stomach compared to feces hindgut colon in liolaemus ruibali argentina research facility 2017-02-251 / 67
194amnon high in colon ileum compared to feces in homo sapiens kingdom of norway 2017-09-071 / 67
8amnon high in stomach compared to colon in mus musculus mouse strain o129 kingdom of norway 2016-10-211 / 68
324amnoncommon australia, gryllinae, field cricket, midgut, colon, digestive system, research facility2018-04-271 / 79
301amnon high in colon rectum compared to duodenum ileum in canis lupus familiaris dog united states of america 2018-03-051 / 79
108amnon high in caecum compared to colon in research facility texas united states of america oreochromis niloticus nile tilapia 2017-04-071 / 80
108amnonincreases during fasting in nile tilapia colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-071 / 81
494amnon high in diet western diet high fat diet compared to mouse chow in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden colon 2019-02-271 / 85
108amnon high in caecum compared to colon in research facility texas united states of america mus musculus mouse 2017-04-071 / 86
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-291 / 94
363amnon high in caecum colon rectum compared to rumen ruminant reticulum omasum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-291 / 101
108amnon high in colon compared to caecum in research facility texas united states of america oreochromis niloticus nile tilapia 2017-04-071 / 103
301amnoncommon canis lupus familiaris, dog, united states of america, colon2018-03-051 / 105
416amnon high in wood diet compared to mulch diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-301 / 115
107amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-071 / 120
8amnon high in colon compared to stomach in mus musculus mouse strain o129 kingdom of norway 2016-10-211 / 132
108amnoncommon research facility, texas, united states of america, colon, anaxyrus terrestris, southern toad2017-04-071 / 132
315amnoncommon in frog gut (common china, hunan province, jiangxi province, quasipaa spinosa, giant spiny frog, frog, colon, digestive system)2018-04-101 / 138
71amnoncommon liolaemus ruibali, colon, hindgut, argentina, research facility2017-02-251 / 144
279amnoncommon china, ochotonidae, pikas, colon, caecum2018-01-241 / 146
108amnon high in colon compared to caecum in research facility texas united states of america coturnix coturnix common quail 2017-04-071 / 157
108amnoncommon research facility, texas, united states of america, colon, mus musculus, mouse2017-04-071 / 158
494amnoncommon mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, western diet, high fat diet2019-02-271 / 161
324amnoncommon australia, gryllinae, field cricket, midgut, colon, digestive system2018-04-271 / 168
194amnon high in feces compared to colon ileum in homo sapiens kingdom of norway 2017-09-071 / 169
107amnoncommon research facility, texas, united states of america, colon, eublepharis macularius, leopard gecko2017-04-071 / 183
71amnon high in feces colon hindgut compared to small intestine stomach in liolaemus ruibali argentina research facility 2017-02-251 / 255
494amnoncommon mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, mouse chow2019-02-271 / 275
494amnon high in mouse chow compared to diet western diet high fat diet in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden colon 2019-02-271 / 293
111amnon high in rumen ruminant reticulum omasum compared to rectum ileum caecum colon in mongolian sheep china ovis aries 2017-04-091 / 294
13amnon high in caecum colon rectum feces compared to mouth esophagus stomach duodenum ileum in mus musculus united states of america gastrointestinal system 2016-11-081 / 316
111amnoncommon mongolian sheep, china, ovis aries, rectum, ileum, cecum, colon2017-04-091 / 330
363amnon high in rumen ruminant reticulum omasum compared to caecum colon rectum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-291 / 360
108amnon high in caecum compared to colon in research facility texas united states of america coturnix coturnix common quail 2017-04-071 / 380
19amnonhigher in controls compared to CD in biopsies ( high in control compared to crohn's disease in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-141 / 459
111amnon high in rectum caecum ileum colon compared to rumen ruminant reticulum omasum in mongolian sheep china ovis aries 2017-04-091 / 464
315amnonhigher in frog pond water compared to frog gut ( high in water fresh water compared to digestive system colon frog quasipaa spinosa giant spiny frog in china jiangxi province hunan province )2018-04-101 / 505
416amnoncommon termite, reticulitermes flaviceps, colon, research facility, united states of america2018-11-301 / 511
279amnon high in caecum colon compared to stomach small intestine in china ochotonidae pikas 2018-01-241 / 634
416amnon high in mulch diet compared to wood diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-301 / 681

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