Summary for ontology term: colon

Number of annotations with term: 105

Annotations:

common ontology terms
term enrichment score
TermScore
colon1.458863
LOWER IN colon0.349265
texas0.304636
caecum0.278689
rectum0.186047
ovis aries0.173913
LOWER IN caecum0.163424
mus musculus0.158640
age 8 weeks0.148148
canada0.148148
right colon0.141176
research facility0.139949
c57bl/60.132780
ileum0.114943
mouse0.109199
termite0.102564
reticulitermes flaviceps0.102564
nile tilapia0.102564
gryllinae0.102564
field cricket0.102564
oreochromis niloticus0.097561
biopsy0.095238
lamb0.093023
new zealand0.093023
charles river laboratories0.093023
age 6 weeks0.088889
midgut0.088889
coturnix coturnix0.086957
LOWER IN ileum0.085470
age 2 months0.085106
digestive system0.081633
taconic farms0.080000
jiangxi province0.080000
belgium0.078431
LOWER IN feces0.077670
male0.075472
jackson laboratories0.074074
hunan province0.074074
united states of america0.073009
sheep0.072727
LOWER IN fasting0.071642
LOWER IN rectum0.071429
dairy0.070796
liolaemus ruibali0.070796
children0.070796
pikas0.070796
quasipaa spinosa0.070796
giant spiny frog0.070796
mongolian sheep0.070796
centrocercus urophasianus0.070796
greater sage-grouse0.070796
state of wyoming0.070796
LOWER IN stomach0.070175
sweden0.070175
fasting0.069565
age 30 days0.068376
argentina0.068376
sigmoid colon0.068376
ochotonidae0.068376
kingdom of norway0.066116
stomach0.066116
terminal ileum0.066116
sus scrofa0.065574
pig0.065574
frog0.058394
obsolete_juvenile stage0.055172
bird0.055172
quail0.054054
anaxyrus terrestris0.054054
southern toad0.054054
LOWER IN right colon0.053333
LOWER IN duodenum0.052632
western diet0.052632
duodenum0.052174
australia0.051948
gastrointestinal system0.051948
hindgut0.051282
LOWER IN late timepoints0.050633
early timepoints0.050633
late timepoints0.047619
LOWER IN early timepoints0.047619
italy0.047337
dog0.046243
diet0.042553
mouse chow0.042553
high fat diet0.042553
canis lupus familiaris0.042328
china0.039674
ruminant reticulum0.037037
omasum0.037037
LOWER IN rumen0.037037
mouse strain o1290.036697
LOWER IN ruminant reticulum0.036697
LOWER IN omasum0.036697
LOWER IN wood diet0.036697
wood diet0.036697
eublepharis macularius0.036697
leopard gecko0.036697
common quail0.036697
cecum0.036697
Fraction of dbbact annotations with this term covered by the query
TermScore
colon6.666667
LOWER IN colon5.000000
LOWER IN caecum1.750000
caecum1.000000
ruminant reticulum0.666667
omasum0.666667
LOWER IN rumen0.666667
LOWER IN fasting0.600000
LOWER IN rectum0.571429
dairy0.500000
rectum0.500000
mouse strain o1290.500000
LOWER IN ruminant reticulum0.500000
LOWER IN omasum0.500000
texas0.500000
termite0.500000
reticulitermes flaviceps0.500000
mulch diet0.500000
LOWER IN wood diet0.500000
wood diet0.500000
LOWER IN mulch diet0.500000
LOWER IN esophagus0.500000
liolaemus ruibali0.500000
children0.500000
pikas0.500000
eublepharis macularius0.500000
leopard gecko0.500000
nile tilapia0.500000
quail0.500000
coturnix coturnix0.500000
anaxyrus terrestris0.500000
southern toad0.500000
LOWER IN digestive system0.500000
LOWER IN quasipaa spinosa0.500000
LOWER IN giant spiny frog0.500000
quasipaa spinosa0.500000
giant spiny frog0.500000
common quail0.500000
mongolian sheep0.500000
cecum0.500000
gryllinae0.500000
field cricket0.500000
chemically defined diet0.500000
LOWER IN cat chow0.500000
cat chow0.500000
LOWER IN chemically defined diet0.500000
tylosin phosphate0.500000
LOWER IN tylosin phosphate0.500000
centrocercus urophasianus0.500000
greater sage-grouse0.500000
state of wyoming0.500000
LOWER IN stomach0.444444
LOWER IN ileum0.416667
ileum0.416667
fasting0.400000
small intestine0.400000
LOWER IN small intestine0.400000
LOWER IN right colon0.400000
right colon0.400000
age 30 days0.333333
LOWER IN duodenum0.333333
argentina0.333333
LOWER IN hindgut0.333333
sigmoid colon0.333333
ochotonidae0.333333
age 8 weeks0.333333
canada0.333333
oreochromis niloticus0.333333
LOWER IN taconic farms0.333333
LOWER IN frog0.333333
LOWER IN diet0.333333
LOWER IN western diet0.333333
western diet0.333333
duodenum0.300000
gastrointestinal system0.285714
biopsy0.285714
lamb0.250000
new zealand0.250000
ovis aries0.250000
kingdom of norway0.250000
stomach0.250000
LOWER IN jejunum0.250000
jejunum0.250000
esophagus0.250000
hindgut0.250000
terminal ileum0.250000
taconic farms0.250000
LOWER IN jackson laboratories0.250000
jiangxi province0.250000
charles river laboratories0.250000
biopsy site0.250000
left colon0.250000
LOWER IN left colon0.250000
LOWER IN late timepoints0.222222
early timepoints0.222222
LOWER IN feces0.210526
age 6 weeks0.200000
LOWER IN research facility0.200000
midgut0.200000
jackson laboratories0.166667
Fraction of annotations for the query sequences containing the term
TermScore
colon0.819048
research facility0.628571
united states of america0.438095
mus musculus0.266667
texas0.219048
mouse0.219048
LOWER IN colon0.180952
caecum0.161905
c57bl/60.152381
ovis aries0.133333
china0.123810
rectum0.114286
age 8 weeks0.095238
canada0.095238
digestive system0.095238
LOWER IN caecum0.085714
right colon0.085714
homo sapiens0.076190
ileum0.066667
lamb0.057143
age 6 weeks0.057143
new zealand0.057143
sheep0.057143
termite0.057143
reticulitermes flaviceps0.057143
feces0.057143
biopsy0.057143
oreochromis niloticus0.057143
nile tilapia0.057143
australia0.057143
gryllinae0.057143
field cricket0.057143
midgut0.057143
age 2 months0.057143
belgium0.057143
sus scrofa0.057143
pig0.057143
male0.057143
charles river laboratories0.057143
sweden0.057143
LOWER IN ileum0.047619
LOWER IN feces0.047619
control0.047619
jackson laboratories0.047619
taconic farms0.047619
coturnix coturnix0.047619
jiangxi province0.047619
hunan province0.047619
age 30 days0.038095
obsolete_juvenile stage0.038095
italy0.038095
dairy0.038095
LOWER IN rectum0.038095
kingdom of norway0.038095
LOWER IN stomach0.038095
stomach0.038095
fasting0.038095
LOWER IN fasting0.038095
liolaemus ruibali0.038095
argentina0.038095
terminal ileum0.038095
sigmoid colon0.038095
children0.038095
ochotonidae0.038095
pikas0.038095
quasipaa spinosa0.038095
giant spiny frog0.038095
frog0.038095
mongolian sheep0.038095
canis lupus familiaris0.038095
dog0.038095
bird0.038095
centrocercus urophasianus0.038095
greater sage-grouse0.038095
state of wyoming0.038095
LOWER IN duodenum0.028571
duodenum0.028571
gastrointestinal system0.028571
hindgut0.028571
LOWER IN control0.028571
LOWER IN late timepoints0.028571
early timepoints0.028571
LOWER IN right colon0.028571
late timepoints0.028571
LOWER IN early timepoints0.028571
quail0.028571
anaxyrus terrestris0.028571
southern toad0.028571
diet0.028571
mouse chow0.028571
western diet0.028571
high fat diet0.028571
rumen0.019048
ruminant reticulum0.019048
omasum0.019048
mouse strain o1290.019048
LOWER IN rumen0.019048
LOWER IN ruminant reticulum0.019048
LOWER IN omasum0.019048
LOWER IN wood diet0.019048
Exp. ID User ID Description Date Region Flag Sequences
14amnonhighest in feces compared to colon ( high in feces compared to colon in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / -7
108amnonquail mitochondria (other research facility, texas, united states of america, colon, quail, coturnix coturnix)2017-04-07v4No1 / -7
409amnon high in right colon compared to left colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / -7
315amnonlower in captive grown compared to wild frogs ( high in wild compared to research facility in hunan province jiangxi province quasipaa spinosa giant spiny frog frog colon digestive system china )2018-04-10v4No1 / -5
108amnondecreases during fasting in nile tilapia colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-07v4No1 / -4
301amnon high in duodenum ileum compared to colon rectum in canis lupus familiaris dog united states of america 2018-03-05v4No1 / -3
108amnondominant research facility, texas, united states of america, colon, oreochromis niloticus, nile tilapia2017-04-07v4No1 / -2
108amnondominant research facility, texas, united states of america, colon, quail, coturnix coturnix2017-04-07v4No1 / -2
700amnon high in tylosin phosphate antibiotic compared to control in colon age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / -1
279amnondominant ochotonidae, pikas, colon, caecum, china2018-01-24v4No1 / 2
700amnon high in caecum compared to colon in control age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 3
700amnon high in tylosin phosphate antibiotic compared to control in colon age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 3
649amnondominant colon, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 5
108amnon high in colon compared to caecum in research facility texas united states of america mus musculus mouse 2017-04-07v4No1 / 5
315amnonhigh freq. in frog gut (dominant hunan province, jiangxi province, quasipaa spinosa, giant spiny frog, frog, colon, digestive system, china)2018-04-10v4No1 / 5
111amnondominant mongolian sheep, ovis aries, rectum, ileum, cecum, colon, china2017-04-09v4No1 / 5
494amnondominant mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, western diet, high fat diet2019-02-27v4No1 / 6
107amnondominant research facility, texas, united states of america, colon, eublepharis macularius, leopard gecko2017-04-07v4No1 / 7
494amnondominant mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, mouse chow2019-02-27v4No1 / 7
409amnon high in left colon compared to right colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / 7
363amnondominant ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-29v4No1 / 8
416amnondominant termite, reticulitermes flaviceps, colon, research facility, united states of america2018-11-30v4No1 / 8
19amnonhigh freq in biopsies of children (IBD study) (dominant rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-14v4No1 / 8
108amnondominant research facility, texas, united states of america, colon, anaxyrus terrestris, southern toad2017-04-07v4No1 / 8
324amnondominant australia, gryllinae, field cricket, midgut, colon, digestive system2018-04-27v4No1 / 8
324amnondominant australia, gryllinae, field cricket, midgut, colon, digestive system, research facility2018-04-27v4No1 / 8
538amnondominant mus musculus, mouse, research facility, c57bl/6, age 8 weeks, canada, colon, right colon, taconic farms2019-07-30v4No1 / 9
538amnondominant mus musculus, mouse, research facility, c57bl/6, age 8 weeks, canada, jackson laboratories, colon, right colon2019-07-30v4No1 / 10
324amnonhiger in crickets fed chemically defined diet compared to cat chow diet ( high in chemically defined diet diet compared to cat chow in australia gryllinae field cricket midgut colon digestive system research facility )2018-04-27v4No1 / 11
301amnondominant canis lupus familiaris, dog, united states of america, colon2018-03-05v4No1 / 11
558amnondominant bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming, colon2019-09-20v4No1 / 11
538amnon high in feces compared to colon right colon in mus musculus mouse research facility c57bl/6 jackson laboratories age 8 weeks canada 2019-07-29v4No1 / 14
71amnondominant liolaemus ruibali, colon, hindgut, argentina, research facility2017-02-25v4No1 / 15
13amnon high in esophagus stomach duodenum ileum mouth compared to caecum colon rectum feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 17
108amnondominant research facility, texas, united states of america, colon, mus musculus, mouse2017-04-07v4No1 / 17
700amnon high in control compared to antibiotic tylosin phosphate in colon age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 18
538amnon high in feces compared to colon right colon in mus musculus mouse research facility c57bl/6 age 8 weeks canada taconic farms 2019-07-29v4No1 / 19
108amnonincreases during fasting in mouse colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 23
315amnonhigher in captive grown compared to wild frogs ( high in research facility compared to wild in hunan province jiangxi province quasipaa spinosa giant spiny frog frog colon digestive system china )2018-04-10v4No1 / 23
19amnonhigher in CD compared to control in biopsies ( high in crohn's disease compared to control in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-14v4No1 / 26
108amnoncommon research facility, texas, united states of america, colon, quail, coturnix coturnix2017-04-07v4No1 / 27
19amnoncommon in biopsies of children (IBD study) (common rectum, terminal ileum, sigmoid colon, caecum, colon, biopsy, children, homo sapiens, united states of america)2016-11-14v4No1 / 32
700amnon high in control compared to tylosin phosphate antibiotic in colon age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 33
108amnoncommon research facility, texas, united states of america, colon, oreochromis niloticus, nile tilapia2017-04-07v4No1 / 35
108amnonincreases during fasting in southern frog colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon anaxyrus terrestris southern toad )2017-04-07v4No1 / 37
538amnon high in colon right colon compared to feces in mus musculus mouse research facility c57bl/6 age 8 weeks canada taconic farms 2019-07-29v4No1 / 43
324amnonlower in crickets fed chemically defined diet compared to cat chow diet ( high in cat chow diet compared to chemically defined diet in australia gryllinae field cricket midgut colon digestive system research facility )2018-04-27v4No1 / 43
416amnon high in fasting compared to wood diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-30v4No1 / 44
279amnon high in small intestine stomach compared to caecum colon in ochotonidae pikas china 2018-01-24v4No1 / 45
416amnon high in wood diet compared to fasting in termite reticulitermes flaviceps colon research facility united states of america 2018-11-30v4No1 / 51
108amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 51
700amnon high in colon compared to caecum in control age 2 months belgium research facility sus scrofa pig 2028-04-01v3No1 / 52
558amnoncommon bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming, colon2019-09-20v4No1 / 58
71amnon high in small intestine stomach compared to feces hindgut colon in liolaemus ruibali argentina research facility 2017-02-25v4No1 / 59
194amnon high in colon ileum compared to feces in homo sapiens kingdom of norway 2017-09-07v4No1 / 59
8amnon high in stomach compared to colon in mus musculus mouse strain o129 kingdom of norway 2016-10-21v4No1 / 60
324amnoncommon australia, gryllinae, field cricket, midgut, colon, digestive system, research facility2018-04-27v4No1 / 71
301amnon high in colon rectum compared to duodenum ileum in canis lupus familiaris dog united states of america 2018-03-05v4No1 / 71
108amnon high in caecum compared to colon in research facility texas united states of america oreochromis niloticus nile tilapia 2017-04-07v4No1 / 72
108amnonincreases during fasting in nile tilapia colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-07v4No1 / 73
494amnon high in diet western diet high fat diet compared to mouse chow in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden colon 2019-02-27v4No1 / 77
108amnon high in caecum compared to colon in research facility texas united states of america mus musculus mouse 2017-04-07v4No1 / 78
363amnoncommon ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, caecum, colon, rectum2018-08-29v4No1 / 86
558amnon high in colon compared to caecum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 89
363amnon high in caecum colon rectum compared to rumen ruminant reticulum omasum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 93
108amnon high in colon compared to caecum in research facility texas united states of america oreochromis niloticus nile tilapia 2017-04-07v4No1 / 95
301amnoncommon canis lupus familiaris, dog, united states of america, colon2018-03-05v4No1 / 97
538amnon high in taconic farms compared to jackson laboratories in mus musculus mouse research facility c57bl/6 age 8 weeks canada colon right colon 2019-07-29v4No1 / 100
416amnon high in wood diet compared to mulch diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-30v4No1 / 107
107amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 112
649amnoncommon colon, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 120
538amnoncommon mus musculus, mouse, research facility, c57bl/6, age 8 weeks, canada, colon, right colon, taconic farms2019-07-30v4No1 / 122
8amnon high in colon compared to stomach in mus musculus mouse strain o129 kingdom of norway 2016-10-21v4No1 / 124
108amnoncommon research facility, texas, united states of america, colon, anaxyrus terrestris, southern toad2017-04-07v4No1 / 124
315amnoncommon in frog gut (common hunan province, jiangxi province, quasipaa spinosa, giant spiny frog, frog, colon, digestive system, china)2018-04-10v4No1 / 130
538amnon high in colon right colon compared to feces in mus musculus mouse research facility c57bl/6 jackson laboratories age 8 weeks canada 2019-07-29v4No1 / 132
71amnoncommon liolaemus ruibali, colon, hindgut, argentina, research facility2017-02-25v4No1 / 136
279amnoncommon ochotonidae, pikas, colon, caecum, china2018-01-24v4No1 / 138
108amnon high in colon compared to caecum in research facility texas united states of america coturnix coturnix common quail 2017-04-07v4No1 / 149
108amnoncommon research facility, texas, united states of america, colon, mus musculus, mouse2017-04-07v4No1 / 150
494amnoncommon mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, western diet, high fat diet2019-02-27v4No1 / 153
324amnoncommon australia, gryllinae, field cricket, midgut, colon, digestive system2018-04-27v4No1 / 160
194amnon high in feces compared to colon ileum in homo sapiens kingdom of norway 2017-09-07v4No1 / 161
538amnon high in jackson laboratories compared to taconic farms in mus musculus mouse research facility c57bl/6 age 8 weeks canada colon right colon 2019-07-29v4No1 / 164
107amnoncommon research facility, texas, united states of america, colon, eublepharis macularius, leopard gecko2017-04-07v4No1 / 175
538amnoncommon mus musculus, mouse, research facility, c57bl/6, age 8 weeks, canada, jackson laboratories, colon, right colon2019-07-30v4No1 / 178
71amnon high in feces colon hindgut compared to small intestine stomach in liolaemus ruibali argentina research facility 2017-02-25v4No1 / 247
494amnoncommon mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, mouse chow2019-02-27v4No1 / 267
494amnon high in mouse chow compared to diet western diet high fat diet in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden colon 2019-02-27v4No1 / 285
111amnon high in rumen ruminant reticulum omasum compared to rectum ileum caecum colon in mongolian sheep ovis aries china 2017-04-09v4No1 / 286
649amnon high in jejunum duodenum compared to colon in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 287
13amnon high in caecum colon rectum feces compared to esophagus stomach duodenum ileum mouth in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 308
111amnoncommon mongolian sheep, ovis aries, rectum, ileum, cecum, colon, china2017-04-09v4No1 / 322
649amnon high in ileum compared to colon in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 330
558amnon high in caecum compared to colon in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 351
363amnon high in rumen ruminant reticulum omasum compared to caecum colon rectum in ovis aries age 30 days obsolete_juvenile stage italy dairy 2018-08-29v4No1 / 352
108amnon high in caecum compared to colon in research facility texas united states of america coturnix coturnix common quail 2017-04-07v4No1 / 372
19amnonhigher in controls compared to CD in biopsies ( high in control compared to crohn's disease in rectum terminal ileum sigmoid colon caecum colon biopsy children homo sapiens united states of america )2016-11-14v4No1 / 451
111amnon high in rectum caecum ileum colon compared to rumen ruminant reticulum omasum in mongolian sheep ovis aries china 2017-04-09v4No1 / 456
315amnonhigher in frog pond water compared to frog gut ( high in water fresh water compared to digestive system colon frog quasipaa spinosa giant spiny frog in jiangxi province hunan province china )2018-04-10v4No1 / 497
416amnoncommon termite, reticulitermes flaviceps, colon, research facility, united states of america2018-11-30v4No1 / 503
279amnon high in caecum colon compared to stomach small intestine in ochotonidae pikas china 2018-01-24v4No1 / 626
416amnon high in mulch diet compared to wood diet in termite reticulitermes flaviceps colon research facility united states of america 2018-11-30v4No1 / 673
649amnon high in colon compared to ileum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 889
649amnon high in colon compared to jejunum duodenum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 1253

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