Summary for ontology term: commonwealth of pennsylvania

Number of annotations with term: 24

Annotations:

common ontology terms
Fraction of dbbact annotations with this term covered by the query
TermScore
commonwealth of pennsylvania0.833333
skin of body0.500000
umbilicus0.500000
mealworm0.500000
tenebrio molitor0.500000
pet store0.500000
inflammatory bowel disease0.500000
LOWER IN inflammatory bowel disease0.500000
trachea0.500000
endotracheal aspirate0.500000
respiratory failure0.500000
acute respiratory failure0.500000
oropharyngeal swab0.500000
LOWER IN trachea0.500000
LOWER IN endotracheal aspirate0.500000
LOWER IN tracheal aspirate0.500000
LOWER IN oropharynx0.500000
LOWER IN oropharyngeal swab0.500000
juvenile stage0.333333
rabbit0.333333
tracheal aspirate0.333333
oropharynx0.333333
oryctolagus cuniculus0.200000
sheep0.200000
ovis aries0.142857
ulcerative colitis0.142857
LOWER IN child0.142857
LOWER IN ulcerative colitis0.142857
hospital0.142857
cow0.125000
crohn's disease0.111111
LOWER IN crohn's disease0.111111
dog0.083333
bos taurus0.083333
canis lupus familiaris0.062500
wild0.058824
child0.043478
skin0.037037
farm0.035714
digestive system0.035714
united states of america0.024876
adult0.020202
homo sapiens0.016484
feces0.013158
research facility0.009259
LOWER IN control0.007143
control0.007092
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
commonwealth of pennsylvania1.000000
feces0.583333
homo sapiens0.583333
adult0.333333
hospital0.250000
respiratory failure0.250000
acute respiratory failure0.250000
child0.125000
ulcerative colitis0.125000
inflammatory bowel disease0.125000
crohn's disease0.125000
control0.125000
trachea0.125000
tracheal aspirate0.125000
endotracheal aspirate0.125000
oropharynx0.125000
oropharyngeal swab0.125000
canis lupus familiaris0.083333
dog0.083333
juvenile stage0.083333
skin of body0.083333
skin0.083333
umbilicus0.083333
bos taurus0.083333
cow0.083333
farm0.083333
digestive system0.083333
mealworm0.083333
tenebrio molitor0.083333
pet store0.083333
research facility0.083333
oryctolagus cuniculus0.083333
rabbit0.083333
wild0.083333
sheep0.083333
ovis aries0.083333
LOWER IN control0.041667
LOWER IN child0.041667
LOWER IN ulcerative colitis0.041667
LOWER IN inflammatory bowel disease0.041667
LOWER IN crohn's disease0.041667
LOWER IN trachea0.041667
LOWER IN endotracheal aspirate0.041667
LOWER IN tracheal aspirate0.041667
LOWER IN oropharynx0.041667
LOWER IN oropharyngeal swab0.041667
Exp. ID User ID Description Date Region Flag Sequences
592amnondominant united states of america, feces, commonwealth of pennsylvania, wild, sheep, ovis aries2020-02-18v1No1 / 2
592amnondominant feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 6
592amnondominant united states of america, feces, commonwealth of pennsylvania, research facility, oryctolagus cuniculus, rabbit2020-02-18v1No1 / 8
636amnoncommon hospital, commonwealth of pennsylvania, united states of america, trachea, tracheal aspirate, endotracheal aspirate, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 13
395amnonhigher in kids with ibd compared to healthy donors ( high in child ulcerative colitis inflammatory bowel disease crohn's disease compared to control in homo sapiens feces united states of america commonwealth of pennsylvania )2018-11-13v4No1 / 16
636amnoncommon oropharynx, oropharyngeal swab, hospital, commonwealth of pennsylvania, united states of america, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 17
623amnoncommon skin of body, skin, homo sapiens, umbilicus, united states of america, adult, commonwealth of pennsylvania2020-05-10v3No1 / 18
636amnon high in tracheal aspirate endotracheal aspirate trachea compared to oropharynx oropharyngeal swab in hospital commonwealth of pennsylvania united states of america respiratory failure acute respiratory failure adult homo sapiens 2020-08-08v4No1 / 18
573amnondominant feces, canis lupus familiaris, dog, united states of america, commonwealth of pennsylvania, juvenile stage2019-12-22v4No1 / 19
592amnondominant digestive system, mealworm, tenebrio molitor, commonwealth of pennsylvania, pet store, united states of america2020-02-18v1No1 / 20
395amnondominant homo sapiens, feces, united states of america, commonwealth of pennsylvania, child, inflammatory bowel disease, crohn's disease, ulcerative colitis2018-11-14v4No1 / 22
623amnondominant skin of body, skin, homo sapiens, umbilicus, united states of america, adult, commonwealth of pennsylvania2020-05-10v3No1 / 23
636amnondominant hospital, commonwealth of pennsylvania, united states of america, trachea, tracheal aspirate, endotracheal aspirate, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 23
636amnondominant oropharynx, oropharyngeal swab, hospital, commonwealth of pennsylvania, united states of america, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 23
395amnondominant homo sapiens, feces, united states of america, commonwealth of pennsylvania, control2018-11-14v4No1 / 24
395amnoncommon homo sapiens, feces, united states of america, commonwealth of pennsylvania, child, ulcerative colitis, inflammatory bowel disease, crohn's disease2018-11-14v4No1 / 25
573amnoncommon feces, canis lupus familiaris, dog, united states of america, commonwealth of pennsylvania, juvenile stage2019-12-22v4No1 / 30
395amnoncommon homo sapiens, feces, united states of america, commonwealth of pennsylvania, control2018-11-14v4No1 / 75
592amnoncommon digestive system, mealworm, tenebrio molitor, commonwealth of pennsylvania, pet store, united states of america2020-02-18v1No1 / 84
395amnonlower in kids with ibd compared to healthy donors ( high in control compared to child ulcerative colitis inflammatory bowel disease crohn's disease in homo sapiens feces united states of america commonwealth of pennsylvania )2018-11-13v4No1 / 107
636amnon high in oropharynx oropharyngeal swab compared to trachea endotracheal aspirate tracheal aspirate in hospital commonwealth of pennsylvania united states of america respiratory failure acute respiratory failure adult homo sapiens 2020-08-08v4No1 / 122
592amnoncommon united states of america, feces, commonwealth of pennsylvania, research facility, oryctolagus cuniculus, rabbit2020-02-18v1No1 / 196
592amnoncommon feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 633
592amnoncommon united states of america, feces, commonwealth of pennsylvania, wild, sheep, ovis aries2020-02-18v1No1 / 828

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