Summary for ontology term: commonwealth of pennsylvania

Number of annotations with term: 26

Annotations:

common ontology terms
Fraction of dbbact annotations with this term covered by the query
TermScore
commonwealth of pennsylvania0.857143
skin of body0.500000
middle nasal meatus0.500000
nose0.500000
mealworm0.500000
tenebrio molitor0.500000
pet store0.500000
ulcerative colitis0.500000
inflammatory bowel disease0.500000
LOWER IN inflammatory bowel disease0.500000
trachea0.500000
endotracheal aspirate0.500000
respiratory failure0.500000
acute respiratory failure0.500000
oropharyngeal swab0.500000
LOWER IN trachea0.500000
LOWER IN endotracheal aspirate0.500000
LOWER IN tracheal aspirate0.500000
LOWER IN oropharyngeal swab0.500000
juvenile stage0.333333
umbilicus0.333333
nasal cavity mucosa0.333333
rabbit0.333333
tracheal aspirate0.333333
LOWER IN oropharynx0.333333
oropharynx0.250000
oryctolagus cuniculus0.142857
LOWER IN ulcerative colitis0.142857
cow0.100000
sheep0.100000
LOWER IN child0.100000
LOWER IN crohn's disease0.100000
hospital0.100000
nasal cavity0.090909
crohn's disease0.090909
ovis aries0.083333
bos taurus0.066667
dog0.058824
wild0.050000
canis lupus familiaris0.047619
digestive system0.035714
skin0.033333
farm0.033333
child0.031250
united states of america0.026549
adult0.021127
homo sapiens0.017021
feces0.010949
research facility0.007874
LOWER IN control0.006250
control0.006211
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
commonwealth of pennsylvania1.000000
homo sapiens0.615385
feces0.538462
adult0.384615
hospital0.230769
respiratory failure0.230769
acute respiratory failure0.230769
child0.115385
ulcerative colitis0.115385
inflammatory bowel disease0.115385
crohn's disease0.115385
control0.115385
trachea0.115385
tracheal aspirate0.115385
endotracheal aspirate0.115385
oropharynx0.115385
oropharyngeal swab0.115385
canis lupus familiaris0.076923
dog0.076923
juvenile stage0.076923
skin of body0.076923
skin0.076923
umbilicus0.076923
bos taurus0.076923
cow0.076923
farm0.076923
middle nasal meatus0.076923
nasal cavity0.076923
nasal cavity mucosa0.076923
nose0.076923
digestive system0.076923
mealworm0.076923
tenebrio molitor0.076923
pet store0.076923
research facility0.076923
oryctolagus cuniculus0.076923
rabbit0.076923
wild0.076923
sheep0.076923
ovis aries0.076923
LOWER IN control0.038462
LOWER IN child0.038462
LOWER IN ulcerative colitis0.038462
LOWER IN inflammatory bowel disease0.038462
LOWER IN crohn's disease0.038462
LOWER IN trachea0.038462
LOWER IN endotracheal aspirate0.038462
LOWER IN tracheal aspirate0.038462
LOWER IN oropharynx0.038462
LOWER IN oropharyngeal swab0.038462
Exp. ID User ID Description Date Region Flag Sequences
592amnondominant united states of america, feces, commonwealth of pennsylvania, wild, sheep, ovis aries2020-02-18v1No1 / -6
592amnondominant feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / -2
592amnondominant united states of america, feces, commonwealth of pennsylvania, research facility, oryctolagus cuniculus, rabbit2020-02-18v1No1 / 0
684amnondominant middle nasal meatus, nasal cavity, nasal cavity mucosa, nose, commonwealth of pennsylvania, united states of america, adult, homo sapiens2028-03-05v1No1 / 5
636amnoncommon hospital, commonwealth of pennsylvania, united states of america, trachea, tracheal aspirate, endotracheal aspirate, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 5
684amnoncommon middle nasal meatus, nasal cavity, nasal cavity mucosa, nose, commonwealth of pennsylvania, united states of america, adult, homo sapiens2028-03-05v1No1 / 7
395amnonhigher in kids with ibd compared to healthy donors ( high in child ulcerative colitis inflammatory bowel disease crohn's disease compared to control in homo sapiens feces united states of america commonwealth of pennsylvania )2018-11-13v4No1 / 8
636amnoncommon oropharynx, oropharyngeal swab, hospital, commonwealth of pennsylvania, united states of america, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 9
623amnoncommon skin of body, skin, homo sapiens, umbilicus, united states of america, adult, commonwealth of pennsylvania2020-05-10v3No1 / 10
636amnon high in tracheal aspirate endotracheal aspirate trachea compared to oropharynx oropharyngeal swab in hospital commonwealth of pennsylvania united states of america respiratory failure acute respiratory failure adult homo sapiens 2020-08-08v4No1 / 10
573amnondominant feces, canis lupus familiaris, dog, united states of america, commonwealth of pennsylvania, juvenile stage2019-12-22v4No1 / 11
592amnondominant digestive system, mealworm, tenebrio molitor, commonwealth of pennsylvania, pet store, united states of america2020-02-18v1No1 / 12
395amnondominant homo sapiens, feces, united states of america, commonwealth of pennsylvania, child, inflammatory bowel disease, crohn's disease, ulcerative colitis2018-11-14v4No1 / 14
623amnondominant skin of body, skin, homo sapiens, umbilicus, united states of america, adult, commonwealth of pennsylvania2020-05-10v3No1 / 15
636amnondominant hospital, commonwealth of pennsylvania, united states of america, trachea, tracheal aspirate, endotracheal aspirate, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 15
636amnondominant oropharynx, oropharyngeal swab, hospital, commonwealth of pennsylvania, united states of america, respiratory failure, acute respiratory failure, adult, homo sapiens2020-08-08v4No1 / 15
395amnondominant homo sapiens, feces, united states of america, commonwealth of pennsylvania, control2018-11-14v4No1 / 16
395amnoncommon homo sapiens, feces, united states of america, commonwealth of pennsylvania, child, ulcerative colitis, inflammatory bowel disease, crohn's disease2018-11-14v4No1 / 17
573amnoncommon feces, canis lupus familiaris, dog, united states of america, commonwealth of pennsylvania, juvenile stage2019-12-22v4No1 / 22
395amnoncommon homo sapiens, feces, united states of america, commonwealth of pennsylvania, control2018-11-14v4No1 / 67
592amnoncommon digestive system, mealworm, tenebrio molitor, commonwealth of pennsylvania, pet store, united states of america2020-02-18v1No1 / 76
395amnonlower in kids with ibd compared to healthy donors ( high in control compared to child ulcerative colitis inflammatory bowel disease crohn's disease in homo sapiens feces united states of america commonwealth of pennsylvania )2018-11-13v4No1 / 99
636amnon high in oropharynx oropharyngeal swab compared to trachea endotracheal aspirate tracheal aspirate in hospital commonwealth of pennsylvania united states of america respiratory failure acute respiratory failure adult homo sapiens 2020-08-08v4No1 / 114
592amnoncommon united states of america, feces, commonwealth of pennsylvania, research facility, oryctolagus cuniculus, rabbit2020-02-18v1No1 / 188
592amnoncommon feces, united states of america, bos taurus, cow, farm, commonwealth of pennsylvania2020-02-18v1No1 / 625
592amnoncommon united states of america, feces, commonwealth of pennsylvania, wild, sheep, ovis aries2020-02-18v1No1 / 820

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