Summary for ontology term: cultivated environment

Number of annotations with term: 88

Annotations:

common ontology terms
term enrichment score
TermScore
cultivated environment0.933333
populus0.352941
orchard0.290323
citrus0.253521
state of tennessee0.252101
tree0.230769
greenhouse soil0.214286
guanajuato0.200000
paddy field soil0.181818
rhizosphere0.176394
ph 7-80.162602
soil0.157165
fragaria x ananassa0.153846
strawberry0.153846
yellow brown soil0.153846
clay loam0.153846
oryza sativa0.153846
agave0.153846
agave tequiliana0.153846
nanjing city prefecture0.142857
ph>70.142857
shanghai proper0.142857
heilongjiang province0.142857
mexico0.142857
farm0.134328
agricultural feature0.133333
desert0.133333
stem0.102190
silt clay loam0.102041
silt loam0.102041
populus trichocarpa x deltoides0.102041
populus deltoides0.102041
leaf0.101124
root0.099644
depth 0-30cm0.097087
organic farming0.083333
depth 30-75cm0.083333
npk fertilizer0.080000
brazil0.064516
continuous cropping0.063830
LOWER IN populus trichocarpa x deltoides0.063830
LOWER IN populus deltoides0.063830
age 10 years0.061856
age 5 years0.060000
china0.057913
age 1 year0.053571
reunion island0.043478
soybean0.042553
ph 4-60.042553
glycine max0.041667
leaf endosphere0.041667
root endosphere0.041667
leaf surface0.041667
ph 5-60.040816
ph 6-70.040816
south africa0.039216
LOWER IN rhizosphere0.034483
italy0.033333
kingdom of spain0.031746
australia0.030769
LOWER IN mediterranean0.022222
LOWER IN semi-arid0.022222
mediterranean0.022222
LOWER IN age 10 years0.022222
LOWER IN continuous cropping0.022222
yunnan province0.022222
hubei province0.022222
LOWER IN ph 7-80.022222
depth 30-75cm0.022222
LOWER IN depth 0-30cm0.022222
LOWER IN silt loam0.022222
LOWER IN detph 30-75cm0.022222
LOWER IN silt clay loam0.022222
subtropical0.021978
semi-arid0.021978
LOWER IN subtropical0.021978
LOWER IN age 5 years0.021978
LOWER IN stem0.021978
spring0.021739
LOWER IN spring0.021739
LOWER IN ph 5-60.021505
LOWER IN age 1 year0.021277
jiangsu province0.021277
hunan province0.021277
LOWER IN leaf0.021053
LOWER IN root0.020202
LOWER IN soil0.020000
LOWER IN winter0.019417
winter0.019231
united states of america0.017279
Fraction of dbbact annotations with this term covered by the query
TermScore
cultivated environment0.875000
orchard0.500000
reunion island0.500000
LOWER IN mediterranean0.500000
LOWER IN semi-arid0.500000
mediterranean0.500000
fragaria x ananassa0.500000
strawberry0.500000
greenhouse soil0.500000
yellow brown soil0.500000
LOWER IN age 10 years0.500000
LOWER IN continuous cropping0.500000
continuous cropping0.500000
clay loam0.500000
organic farming0.500000
yunnan province0.500000
hubei province0.500000
LOWER IN ph 7-80.500000
depth 30-75cm0.500000
LOWER IN depth 0-30cm0.500000
LOWER IN silt loam0.500000
silt clay loam0.500000
silt loam0.500000
LOWER IN detph 30-75cm0.500000
LOWER IN silt clay loam0.500000
populus0.500000
depth 30-75cm0.500000
populus trichocarpa x deltoides0.500000
populus deltoides0.500000
LOWER IN populus trichocarpa x deltoides0.500000
LOWER IN populus deltoides0.500000
agave0.500000
guanajuato0.500000
agave tequiliana0.500000
citrus0.333333
subtropical0.333333
semi-arid0.333333
LOWER IN subtropical0.333333
nanjing city prefecture0.333333
LOWER IN age 5 years0.333333
age 10 years0.333333
soybean0.333333
ph 4-60.333333
ph>70.333333
shanghai proper0.333333
npk fertilizer0.333333
paddy field soil0.333333
heilongjiang province0.333333
depth 0-30cm0.333333
LOWER IN stem0.333333
ph 7-80.285714
spring0.250000
LOWER IN spring0.250000
age 5 years0.250000
glycine max0.250000
agricultural feature0.250000
leaf endosphere0.250000
root endosphere0.250000
leaf surface0.250000
oryza sativa0.200000
ph 5-60.200000
LOWER IN ph 5-60.200000
ph 6-70.200000
state of tennessee0.200000
tree0.200000
LOWER IN age 1 year0.166667
jiangsu province0.166667
hunan province0.166667
mexico0.166667
south africa0.142857
stem0.142857
LOWER IN leaf0.142857
desert0.142857
root0.133333
age 1 year0.125000
rhizosphere0.114286
brazil0.111111
farm0.100000
leaf0.100000
soil0.090909
LOWER IN root0.090909
LOWER IN soil0.083333
LOWER IN rhizosphere0.071429
LOWER IN winter0.066667
italy0.062500
winter0.062500
kingdom of spain0.052632
australia0.047619
china0.031746
united states of america0.008850
Fraction of annotations for the query sequences containing the term
TermScore
cultivated environment1.000000
soil0.579545
rhizosphere0.386364
united states of america0.363636
state of tennessee0.340909
china0.329545
populus0.272727
tree0.272727
citrus0.204545
orchard0.204545
farm0.204545
greenhouse soil0.136364
paddy field soil0.125000
oryza sativa0.125000
desert0.125000
guanajuato0.125000
mexico0.125000
ph 7-80.113636
leaf0.102273
fragaria x ananassa0.090909
strawberry0.090909
yellow brown soil0.090909
nanjing city prefecture0.090909
ph>70.090909
agricultural feature0.090909
shanghai proper0.090909
clay loam0.090909
heilongjiang province0.090909
agave0.090909
agave tequiliana0.090909
stem0.079545
root0.079545
silt clay loam0.056818
depth 0-30cm0.056818
silt loam0.056818
populus trichocarpa x deltoides0.056818
populus deltoides0.056818
brazil0.045455
npk fertilizer0.045455
organic farming0.045455
depth 30-75cm0.045455
age 1 year0.034091
continuous cropping0.034091
age 5 years0.034091
age 10 years0.034091
LOWER IN populus trichocarpa x deltoides0.034091
LOWER IN populus deltoides0.034091
australia0.022727
italy0.022727
reunion island0.022727
kingdom of spain0.022727
south africa0.022727
glycine max0.022727
soybean0.022727
ph 4-60.022727
ph 5-60.022727
ph 6-70.022727
LOWER IN rhizosphere0.022727
leaf endosphere0.022727
root endosphere0.022727
leaf surface0.022727
subtropical0.011364
LOWER IN mediterranean0.011364
LOWER IN semi-arid0.011364
mediterranean0.011364
semi-arid0.011364
LOWER IN subtropical0.011364
spring0.011364
LOWER IN winter0.011364
winter0.011364
LOWER IN spring0.011364
LOWER IN age 5 years0.011364
LOWER IN age 10 years0.011364
LOWER IN continuous cropping0.011364
LOWER IN age 1 year0.011364
jiangsu province0.011364
yunnan province0.011364
hunan province0.011364
hubei province0.011364
LOWER IN ph 7-80.011364
LOWER IN ph 5-60.011364
depth 30-75cm0.011364
LOWER IN depth 0-30cm0.011364
LOWER IN silt loam0.011364
LOWER IN detph 30-75cm0.011364
LOWER IN silt clay loam0.011364
LOWER IN soil0.011364
LOWER IN stem0.011364
LOWER IN leaf0.011364
LOWER IN root0.011364
Exp. ID User ID Description Date Region Flag Sequences
422amnondominant soil, paddy field soil, oryza sativa, heilongjiang province, cultivated environment, china2018-12-02v4No1 / -6
422amnondominant soil, paddy field soil, oryza sativa, heilongjiang province, ph 6-7, cultivated environment, china2018-12-04v4No1 / -6
444amnondominant rhizosphere, fragaria x ananassa, strawberry, greenhouse soil, farm, yellow brown soil, nanjing city prefecture, age 1 year, china, cultivated environment2019-01-07v4No1 / -5
462amnondominant united states of america, state of tennessee, rhizosphere, populus, tree, depth 0-30cm, silt loam, cultivated environment2019-01-13v4No1 / -5
462amnondominant united states of america, state of tennessee, populus, tree, stem, populus deltoides, cultivated environment2019-01-13v4No1 / -5
415amnondominant rhizosphere, soil, citrus, australia, orchard, cultivated environment2018-11-27v4No1 / -4
415amnondominant rhizosphere, soil, citrus, orchard, italy, cultivated environment2018-11-27v4No1 / -4
420amnonhigh freq. in soil of vegetable open field (dominant soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, npk fertilizer, cultivated environment, china)2018-12-02v4No1 / -4
420amnonhigh freq. in soil of vegetables in organic plastic tunnel (dominant soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, organic farming, greenhouse soil, china, cultivated environment)2018-12-02v4No1 / -4
462amnondominant united states of america, state of tennessee, soil, depth 0-30cm, silt loam, cultivated environment2019-01-13v4No1 / -4
360amnondominant desert, soil, mexico, guanajuato, cultivated environment2018-08-21v4No1 / -4
420amnonhigh freq. in soil of vegetable in plastic tunnel (dominant soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, npk fertilizer, greenhouse soil, cultivated environment, china)2018-12-02v4No1 / -3
415amnondominant rhizosphere, soil, citrus, orchard, reunion island, cultivated environment2018-11-27v4No1 / -2
415amnondominant rhizosphere, soil, citrus, orchard, united states of america, cultivated environment2018-11-27v4No1 / -2
444amnondominant rhizosphere, fragaria x ananassa, strawberry, greenhouse soil, farm, yellow brown soil, nanjing city prefecture, continuous cropping, age 5 years, age 10 years, china, cultivated environment2019-01-07v4No1 / -2
420amnonhigh freq. in soil of vegetables in organic field (dominant soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, organic farming, china, cultivated environment)2018-12-02v4No1 / -2
462amnondominant united states of america, state of tennessee, depth 30-75cm, silt clay loam, rhizosphere, populus, tree, cultivated environment2019-01-13v4No1 / -2
360amnondominant desert, soil, mexico, guanajuato, cultivated environment2018-08-21v4No1 / -2
415amnondominant rhizosphere, soil, citrus, orchard, china, cultivated environment2018-11-27v4No1 / -1
415amnondominant rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 0
415amnondominant rhizosphere, soil, citrus, orchard, south africa, cultivated environment2018-11-27v4No1 / 0
474amnondominant farm, soil, soybean, glycine max, ph 4-6, brazil, cultivated environment2019-01-16v4No1 / 0
462amnondominant united states of america, state of tennessee, soil, depth 30-75cm, silt clay loam, cultivated environment2019-01-13v4No1 / 0
415amnondominant rhizosphere, soil, citrus, orchard, kingdom of spain, cultivated environment2018-11-27v4No1 / 1
462amnondominant united states of america, state of tennessee, populus, tree, root, cultivated environment2019-01-13v4No1 / 1
360amnondominant agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v4No1 / 2
444amnon high in spring compared to winter in rhizosphere fragaria x ananassa strawberry greenhouse soil farm yellow brown soil nanjing city prefecture cultivated environment china 2019-01-07v4No1 / 3
444amnon high in winter compared to spring in rhizosphere fragaria x ananassa strawberry greenhouse soil farm yellow brown soil nanjing city prefecture cultivated environment china 2019-01-07v4No1 / 3
462amnondominant united states of america, state of tennessee, populus, tree, populus trichocarpa x deltoides, stem, cultivated environment2019-01-13v4No1 / 4
360amnondominant desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v4No1 / 4
462amnondominant united states of america, state of tennessee, populus, tree, leaf, cultivated environment2019-01-13v4No1 / 7
360amnondominant agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated environment2018-08-21v4No1 / 8
360amnondominant agave, desert, root endosphere, mexico, guanajuato, agave tequiliana, cultivated environment, root2018-08-21v4No1 / 9
462amnoncommon united states of america, state of tennessee, populus, tree, leaf, cultivated environment2019-01-13v4No1 / 20
462amnoncommon united states of america, state of tennessee, populus, tree, stem, populus deltoides, cultivated environment2019-01-13v4No1 / 21
462amnoncommon united states of america, state of tennessee, populus, tree, populus trichocarpa x deltoides, stem, cultivated environment2019-01-13v4No1 / 40
462amnoncommon united states of america, state of tennessee, populus, tree, root, cultivated environment2019-01-13v4No1 / 43
462amnon high in root compared to rhizosphere in united states of america state of tennessee populus tree cultivated environment 2019-01-13v4No1 / 49
360amnoncommon agave, desert, root endosphere, mexico, guanajuato, agave tequiliana, cultivated environment, root2018-08-21v4No1 / 54
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee populus tree leaf cultivated environment 2019-01-13v4No1 / 68
360amnoncommon agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated environment2018-08-21v4No1 / 70
360amnoncommon desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v4No1 / 90
462amnon high in soil compared to rhizosphere in united states of america state of tennessee populus tree cultivated environment 2019-01-12v4No1 / 123
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee populus tree stem cultivated environment 2019-01-13v4No1 / 158
360amnoncommon agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated environment2018-08-21v4No1 / 202
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee populus tree stem cultivated environment 2019-01-13v4No1 / 241
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee populus tree root cultivated environment 2019-01-13v4No1 / 246
415amnonlower in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in mediterranean semi-arid compared to subtropical in rhizosphere soil citrus orchard cultivated environment )2018-11-27v4No1 / 256
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee populus tree root cultivated environment 2019-01-13v4No1 / 292
415amnonhigher in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in subtropical compared to mediterranean semi-arid in rhizosphere soil citrus orchard cultivated environment )2018-11-27v4No1 / 450
462amnon high in stem compared to leaf in united states of america state of tennessee populus tree cultivated environment 2019-01-13v4No1 / 469
415amnoncommon rhizosphere, soil, citrus, orchard, united states of america, cultivated environment2018-11-27v4No1 / 486
360amnoncommon desert, soil, mexico, guanajuato, cultivated environment2018-08-21v4No1 / 492
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee populus tree leaf cultivated environment 2019-01-13v4No1 / 551
415amnoncommon rhizosphere, soil, citrus, orchard, south africa, cultivated environment2018-11-27v4No1 / 592
444amnonhigher in continuously cropped strawberry soil ( high in continuous cropping age 5 years age 10 years compared to age 1 year in rhizosphere fragaria x ananassa strawberry greenhouse soil farm yellow brown soil nanjing city prefecture china cultivated environment )2019-01-07v4No1 / 594
462amnon high in depth 30-75cm silt clay loam compared to depth 0-30cm silt loam in soil united states of america state of tennessee cultivated environment 2019-01-12v4No1 / 657
422amnoncommon soil, paddy field soil, oryza sativa, heilongjiang province, ph 6-7, cultivated environment, china2018-12-04v4No1 / 674
415amnoncommon rhizosphere, soil, citrus, orchard, reunion island, cultivated environment2018-11-27v4No1 / 713
422amnoncommon soil, paddy field soil, oryza sativa, heilongjiang province, ph 5-6, cultivated environment, china2018-12-04v4No1 / 718
462amnoncommon united states of america, state of tennessee, soil, depth 30-75cm, silt clay loam, cultivated environment2019-01-13v4No1 / 720
415amnoncommon rhizosphere, soil, citrus, australia, orchard, cultivated environment2018-11-27v4No1 / 735
422amnoncommon soil, paddy field soil, oryza sativa, yunnan province, china, cultivated environment2018-12-02v4No1 / 813
415amnoncommon rhizosphere, soil, citrus, orchard, china, cultivated environment2018-11-27v4No1 / 822
444amnoncommon rhizosphere, fragaria x ananassa, strawberry, greenhouse soil, farm, yellow brown soil, nanjing city prefecture, continuous cropping, age 5 years, age 10 years, china, cultivated environment2019-01-07v4No1 / 825
462amnon high in leaf compared to stem in united states of america state of tennessee populus tree cultivated environment 2019-01-13v4No1 / 882
462amnoncommon united states of america, state of tennessee, depth 30-75cm, silt clay loam, rhizosphere, populus, tree, cultivated environment2019-01-13v4No1 / 900
462amnoncommon united states of america, state of tennessee, soil, depth 0-30cm, silt loam, cultivated environment2019-01-13v4No1 / 930
422amnoncommon soil, paddy field soil, jiangsu province, oryza sativa, china, cultivated environment2018-12-02v4No1 / 949
474amnoncommon soil, farm, glycine max, soybean, ph 4-6, brazil, cultivated environment2019-01-16v4No1 / 966
462amnoncommon united states of america, state of tennessee, rhizosphere, populus, tree, depth 0-30cm, silt loam, cultivated environment2019-01-13v4No1 / 989
422amnoncommon soil, paddy field soil, oryza sativa, heilongjiang province, china, cultivated environment2018-12-02v4No1 / 1041
415amnoncommon rhizosphere, soil, citrus, orchard, brazil, cultivated environment2018-11-27v4No1 / 1083
415amnoncommon rhizosphere, soil, citrus, orchard, kingdom of spain, cultivated environment2018-11-27v4No1 / 1091
422amnoncommon soil, paddy field soil, oryza sativa, heilongjiang province, ph 7-8, cultivated environment, china2018-12-04v4No1 / 1161
444amnonlower in continuously cropped strawberry soil ( high in age 1 year compared to age 5 years age 10 years continuous cropping in rhizosphere fragaria x ananassa strawberry greenhouse soil farm yellow brown soil nanjing city prefecture china cultivated environment )2019-01-07v4No1 / 1213
420amnoncommon in soil of vegetables in organic field (common soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, organic farming, cultivated environment, china)2018-12-02v4No1 / 1232
415amnoncommon rhizosphere, soil, citrus, orchard, italy, cultivated environment2018-11-27v4No1 / 1271
420amnoncommon in soil of vegetables in organic plastic tunnel (common soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, organic farming, greenhouse soil, china, cultivated environment)2018-12-02v4No1 / 1286
420amnoncommon in soil of vegetable open field (common soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, npk fertilizer, cultivated environment, china)2018-12-02v4No1 / 1368
420amnonhigh freq. in soil of vegetable in plastic tunnel (common soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, npk fertilizer, greenhouse soil, cultivated environment, china)2018-12-02v4No1 / 1388
422amnoncommon soil, paddy field soil, oryza sativa, hunan province, hubei province, china, cultivated environment2018-12-02v4No1 / 1391
462amnon high in rhizosphere compared to soil in united states of america state of tennessee populus tree cultivated environment 2019-01-12v4No1 / 1420
444amnoncommon rhizosphere, fragaria x ananassa, strawberry, greenhouse soil, farm, yellow brown soil, nanjing city prefecture, age 1 year, china, cultivated environment2019-01-07v4No1 / 1431
422amnon high in ph 5-6 compared to ph 7-8 in soil paddy field soil oryza sativa heilongjiang province cultivated environment china 2018-12-04v4No1 / 1626
462amnon high in depth 0-30cm silt loam compared to detph 30-75cm silt clay loam in soil united states of america state of tennessee cultivated environment 2019-01-12v4No1 / 1640
422amnon high in ph 7-8 compared to ph 5-6 in soil paddy field soil oryza sativa heilongjiang province cultivated environment china 2018-12-04v4No1 / 3259
462amnon high in rhizosphere compared to root in united states of america state of tennessee populus tree cultivated environment 2019-01-13v4No1 / 4622

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