Summary for ontology term: cultivated habitat

Number of annotations with term: 88

Annotations:

common ontology terms
term enrichment score
TermScore
cultivated habitat0.933333
populus0.352941
orchard0.290323
citrus0.253521
state of tennessee0.252101
tree0.230769
greenhouse soil0.214286
rhizosphere0.214173
guanajuato0.200000
soil0.195590
ph 7-80.185185
paddy field soil0.181818
farm0.163636
fragaria x ananassa0.153846
strawberry0.153846
yellow brown soil0.153846
nanjing city prefecture0.153846
shanghai proper0.153846
clay loam0.153846
oryza sativa0.153846
agave0.153846
mexico0.153846
agave tequiliana0.153846
ph>70.142857
heilongjiang province0.142857
agricultural feature0.133333
desert0.133333
stem0.113821
leaf0.106509
root0.104869
silt clay loam0.102041
depth 0-30cm0.102041
silt loam0.102041
populus trichocarpa x deltoides0.102041
populus deltoides0.102041
organic farming0.083333
depth 30-75cm0.083333
china0.083214
npk fertilizer0.080000
brazil0.068966
continuous cropping0.063830
age 5 years0.063830
age 10 years0.063830
LOWER IN populus trichocarpa x deltoides0.063830
LOWER IN populus deltoides0.063830
age 1 year0.056604
reunion island0.043478
ph 4-60.043478
leaf endosphere0.043478
root endosphere0.043478
leaf surface0.043478
soybean0.042553
glycine max0.041667
ph 5-60.041667
ph 6-70.041667
south africa0.040000
italy0.037736
kingdom of spain0.037037
LOWER IN rhizosphere0.035714
australia0.033898
LOWER IN mediterranean0.022222
LOWER IN semi-arid0.022222
mediterranean0.022222
LOWER IN age 5 years0.022222
LOWER IN age 10 years0.022222
LOWER IN continuous cropping0.022222
yunnan province0.022222
hubei province0.022222
LOWER IN ph 7-80.022222
depth 30-75cm0.022222
LOWER IN depth 0-30cm0.022222
LOWER IN silt loam0.022222
LOWER IN detph 30-75cm0.022222
LOWER IN silt clay loam0.022222
LOWER IN stem0.022222
subtropical0.021978
semi-arid0.021978
LOWER IN subtropical0.021978
LOWER IN spring0.021739
LOWER IN age 1 year0.021739
jiangsu province0.021739
LOWER IN ph 5-60.021739
united states of america0.021448
spring0.021277
hunan province0.021277
LOWER IN leaf0.021277
LOWER IN root0.020619
LOWER IN soil0.020202
LOWER IN winter0.020000
winter0.019802
Fraction of dbbact annotations with this term covered by the query
TermScore
cultivated habitat0.875000
orchard0.500000
reunion island0.500000
LOWER IN mediterranean0.500000
LOWER IN semi-arid0.500000
mediterranean0.500000
fragaria x ananassa0.500000
strawberry0.500000
greenhouse soil0.500000
yellow brown soil0.500000
nanjing city prefecture0.500000
LOWER IN age 5 years0.500000
LOWER IN age 10 years0.500000
LOWER IN continuous cropping0.500000
continuous cropping0.500000
age 5 years0.500000
age 10 years0.500000
ph 4-60.500000
ph 7-80.500000
shanghai proper0.500000
clay loam0.500000
organic farming0.500000
yunnan province0.500000
hubei province0.500000
LOWER IN ph 7-80.500000
depth 30-75cm0.500000
LOWER IN depth 0-30cm0.500000
LOWER IN silt loam0.500000
silt clay loam0.500000
depth 0-30cm0.500000
silt loam0.500000
LOWER IN detph 30-75cm0.500000
LOWER IN silt clay loam0.500000
populus0.500000
depth 30-75cm0.500000
populus trichocarpa x deltoides0.500000
populus deltoides0.500000
LOWER IN populus trichocarpa x deltoides0.500000
LOWER IN populus deltoides0.500000
LOWER IN stem0.500000
agave0.500000
leaf endosphere0.500000
guanajuato0.500000
agave tequiliana0.500000
root endosphere0.500000
leaf surface0.500000
citrus0.333333
subtropical0.333333
semi-arid0.333333
LOWER IN subtropical0.333333
soybean0.333333
ph>70.333333
npk fertilizer0.333333
paddy field soil0.333333
heilongjiang province0.333333
LOWER IN spring0.250000
LOWER IN age 1 year0.250000
glycine max0.250000
agricultural feature0.250000
jiangsu province0.250000
ph 5-60.250000
LOWER IN ph 5-60.250000
ph 6-70.250000
oryza sativa0.200000
state of tennessee0.200000
tree0.200000
stem0.200000
mexico0.200000
south africa0.166667
spring0.166667
age 1 year0.166667
hunan province0.166667
LOWER IN leaf0.166667
root0.153846
rhizosphere0.148148
brazil0.142857
desert0.142857
farm0.136364
soil0.117647
italy0.111111
leaf0.111111
LOWER IN root0.111111
kingdom of spain0.100000
LOWER IN soil0.090909
LOWER IN winter0.083333
LOWER IN rhizosphere0.083333
winter0.076923
australia0.066667
china0.047619
united states of america0.011050
Fraction of annotations for the query sequences containing the term
TermScore
cultivated habitat1.000000
soil0.579545
rhizosphere0.386364
united states of america0.363636
state of tennessee0.340909
china0.329545
populus0.272727
tree0.272727
citrus0.204545
orchard0.204545
farm0.204545
greenhouse soil0.136364
paddy field soil0.125000
oryza sativa0.125000
desert0.125000
guanajuato0.125000
mexico0.125000
ph 7-80.113636
leaf0.102273
fragaria x ananassa0.090909
strawberry0.090909
yellow brown soil0.090909
nanjing city prefecture0.090909
ph>70.090909
agricultural feature0.090909
shanghai proper0.090909
clay loam0.090909
heilongjiang province0.090909
agave0.090909
agave tequiliana0.090909
stem0.079545
root0.079545
silt clay loam0.056818
depth 0-30cm0.056818
silt loam0.056818
populus trichocarpa x deltoides0.056818
populus deltoides0.056818
brazil0.045455
npk fertilizer0.045455
organic farming0.045455
depth 30-75cm0.045455
age 1 year0.034091
continuous cropping0.034091
age 5 years0.034091
age 10 years0.034091
LOWER IN populus trichocarpa x deltoides0.034091
LOWER IN populus deltoides0.034091
australia0.022727
italy0.022727
reunion island0.022727
kingdom of spain0.022727
south africa0.022727
glycine max0.022727
soybean0.022727
ph 4-60.022727
ph 5-60.022727
ph 6-70.022727
LOWER IN rhizosphere0.022727
leaf endosphere0.022727
root endosphere0.022727
leaf surface0.022727
subtropical0.011364
LOWER IN mediterranean0.011364
LOWER IN semi-arid0.011364
mediterranean0.011364
semi-arid0.011364
LOWER IN subtropical0.011364
spring0.011364
LOWER IN winter0.011364
winter0.011364
LOWER IN spring0.011364
LOWER IN age 5 years0.011364
LOWER IN age 10 years0.011364
LOWER IN continuous cropping0.011364
LOWER IN age 1 year0.011364
jiangsu province0.011364
yunnan province0.011364
hunan province0.011364
hubei province0.011364
LOWER IN ph 7-80.011364
LOWER IN ph 5-60.011364
depth 30-75cm0.011364
LOWER IN depth 0-30cm0.011364
LOWER IN silt loam0.011364
LOWER IN detph 30-75cm0.011364
LOWER IN silt clay loam0.011364
LOWER IN soil0.011364
LOWER IN stem0.011364
LOWER IN leaf0.011364
LOWER IN root0.011364
Exp. ID User ID Description Date Region Flag Sequences
422amnonhighfreq soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province2018-12-02v4No1 / 2
422amnonhighfreq soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province, ph 6-72018-12-04v4No1 / 2
444amnonhighfreq rhizosphere, fragaria x ananassa, strawberry, china, greenhouse soil, farm, cultivated habitat, yellow brown soil, nanjing city prefecture, age 1 year2019-01-07v4No1 / 3
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, rhizosphere, populus, tree, depth 0-30cm, silt loam2019-01-13v4No1 / 3
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, stem, populus deltoides2019-01-13v4No1 / 3
415amnonhighfreq rhizosphere, soil, citrus, australia, orchard, cultivated habitat2018-11-27v4No1 / 4
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, italy2018-11-27v4No1 / 4
420amnonhigh freq. in soil of vegetable open field (highfreq china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, npk fertilizer)2018-12-02v4No1 / 4
420amnonhigh freq. in soil of vegetables in organic plastic tunnel (highfreq china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, organic farming, greenhouse soil)2018-12-02v4No1 / 4
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, soil, depth 0-30cm, silt loam2019-01-13v4No1 / 4
360amnonhighfreq desert, soil, mexico, guanajuato, cultivated habitat2018-08-21v4No1 / 4
420amnonhigh freq. in soil of vegetable in plastic tunnel (highfreq china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, npk fertilizer, greenhouse soil)2018-12-02v4No1 / 5
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, reunion island2018-11-27v4No1 / 6
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, united states of america2018-11-27v4No1 / 6
444amnonhighfreq rhizosphere, fragaria x ananassa, strawberry, china, greenhouse soil, farm, cultivated habitat, yellow brown soil, nanjing city prefecture, continuous cropping, age 5 years, age 10 years2019-01-07v4No1 / 6
420amnonhigh freq. in soil of vegetables in organic field (highfreq china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, organic farming)2018-12-02v4No1 / 6
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, depth 30-75cm, silt clay loam, rhizosphere, populus, tree2019-01-13v4No1 / 6
360amnonhighfreq desert, soil, mexico, guanajuato, cultivated habitat2018-08-21v4No1 / 6
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, china2018-11-27v4No1 / 7
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, brazil2018-11-27v4No1 / 8
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, south africa2018-11-27v4No1 / 8
474amnonhighfreq farm, cultivated habitat, soil, soybean, glycine max, ph 4-6, brazil2019-01-16v4No1 / 8
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, soil, depth 30-75cm, silt clay loam2019-01-13v4No1 / 8
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, kingdom of spain2018-11-27v4No1 / 9
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, root2019-01-13v4No1 / 9
360amnonhighfreq agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-21v4No1 / 10
444amnon high in spring compared to winter in rhizosphere fragaria x ananassa strawberry china greenhouse soil farm cultivated habitat yellow brown soil nanjing city prefecture 2019-01-07v4No1 / 11
444amnon high in winter compared to spring in rhizosphere fragaria x ananassa strawberry china greenhouse soil farm cultivated habitat yellow brown soil nanjing city prefecture 2019-01-07v4No1 / 11
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, populus trichocarpa x deltoides, stem2019-01-13v4No1 / 12
360amnonhighfreq desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-21v4No1 / 12
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, leaf2019-01-13v4No1 / 15
360amnonhighfreq agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated habitat2018-08-21v4No1 / 16
360amnonhighfreq agave, desert, root, root endosphere, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-21v4No1 / 17
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, leaf2019-01-13v4No1 / 28
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, stem, populus deltoides2019-01-13v4No1 / 29
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, populus trichocarpa x deltoides, stem2019-01-13v4No1 / 48
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, root2019-01-13v4No1 / 51
462amnon high in root compared to rhizosphere in united states of america state of tennessee cultivated habitat populus tree 2019-01-13v4No1 / 57
360amnoncommon agave, desert, root, root endosphere, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-21v4No1 / 62
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree leaf 2019-01-13v4No1 / 76
360amnoncommon agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated habitat2018-08-21v4No1 / 78
360amnoncommon desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-21v4No1 / 98
462amnon high in soil compared to rhizosphere in united states of america state of tennessee cultivated habitat populus tree 2019-01-12v4No1 / 131
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree stem 2019-01-13v4No1 / 166
360amnoncommon agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-21v4No1 / 210
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree stem 2019-01-13v4No1 / 249
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree root 2019-01-13v4No1 / 254
415amnonlower in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in mediterranean semi-arid compared to subtropical in rhizosphere soil citrus orchard cultivated habitat )2018-11-27v4No1 / 264
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree root 2019-01-13v4No1 / 300
415amnonhigher in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in subtropical compared to mediterranean semi-arid in rhizosphere soil citrus orchard cultivated habitat )2018-11-27v4No1 / 458
462amnon high in stem compared to leaf in united states of america state of tennessee cultivated habitat populus tree 2019-01-13v4No1 / 477
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, united states of america2018-11-27v4No1 / 494
360amnoncommon desert, soil, mexico, guanajuato, cultivated habitat2018-08-21v4No1 / 500
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree leaf 2019-01-13v4No1 / 559
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, south africa2018-11-27v4No1 / 600
444amnonhigher in continuously cropped strawberry soil ( high in continuous cropping age 5 years age 10 years compared to age 1 year in rhizosphere fragaria x ananassa strawberry china greenhouse soil farm cultivated habitat yellow brown soil nanjing city prefecture )2019-01-07v4No1 / 602
462amnon high in depth 30-75cm silt clay loam compared to depth 0-30cm silt loam in soil united states of america state of tennessee cultivated habitat 2019-01-12v4No1 / 665
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province, ph 6-72018-12-04v4No1 / 682
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, reunion island2018-11-27v4No1 / 721
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province, ph 5-62018-12-04v4No1 / 726
462amnoncommon united states of america, state of tennessee, cultivated habitat, soil, depth 30-75cm, silt clay loam2019-01-13v4No1 / 728
415amnoncommon rhizosphere, soil, citrus, australia, orchard, cultivated habitat2018-11-27v4No1 / 743
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, yunnan province2018-12-02v4No1 / 821
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, china2018-11-27v4No1 / 830
444amnoncommon rhizosphere, fragaria x ananassa, strawberry, china, greenhouse soil, farm, cultivated habitat, yellow brown soil, nanjing city prefecture, continuous cropping, age 5 years, age 10 years2019-01-07v4No1 / 833
462amnon high in leaf compared to stem in united states of america state of tennessee cultivated habitat populus tree 2019-01-13v4No1 / 890
462amnoncommon united states of america, state of tennessee, cultivated habitat, depth 30-75cm, silt clay loam, rhizosphere, populus, tree2019-01-13v4No1 / 908
462amnoncommon united states of america, state of tennessee, cultivated habitat, soil, depth 0-30cm, silt loam2019-01-13v4No1 / 938
422amnoncommon soil, paddy field soil, cultivated habitat, china, jiangsu province, oryza sativa2018-12-02v4No1 / 957
474amnoncommon soil, cultivated habitat, farm, glycine max, soybean, ph 4-6, brazil2019-01-16v4No1 / 974
462amnoncommon united states of america, state of tennessee, cultivated habitat, rhizosphere, populus, tree, depth 0-30cm, silt loam2019-01-13v4No1 / 997
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province2018-12-02v4No1 / 1049
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, brazil2018-11-27v4No1 / 1091
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, kingdom of spain2018-11-27v4No1 / 1099
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province, ph 7-82018-12-04v4No1 / 1169
444amnonlower in continuously cropped strawberry soil ( high in age 1 year compared to age 5 years age 10 years continuous cropping in rhizosphere fragaria x ananassa strawberry china greenhouse soil farm cultivated habitat yellow brown soil nanjing city prefecture )2019-01-07v4No1 / 1221
420amnoncommon in soil of vegetables in organic field (common china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, organic farming)2018-12-02v4No1 / 1240
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, italy2018-11-27v4No1 / 1279
420amnoncommon in soil of vegetables in organic plastic tunnel (common china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, organic farming, greenhouse soil)2018-12-02v4No1 / 1294
420amnoncommon in soil of vegetable open field (common china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, npk fertilizer)2018-12-02v4No1 / 1376
420amnonhigh freq. in soil of vegetable in plastic tunnel (common china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, npk fertilizer, greenhouse soil)2018-12-02v4No1 / 1396
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, hunan province, hubei province2018-12-02v4No1 / 1399
462amnon high in rhizosphere compared to soil in united states of america state of tennessee cultivated habitat populus tree 2019-01-12v4No1 / 1428
444amnoncommon rhizosphere, fragaria x ananassa, strawberry, china, greenhouse soil, farm, cultivated habitat, yellow brown soil, nanjing city prefecture, age 1 year2019-01-07v4No1 / 1439
422amnon high in ph 5-6 compared to ph 7-8 in soil paddy field soil cultivated habitat china oryza sativa heilongjiang province 2018-12-04v4No1 / 1634
462amnon high in depth 0-30cm silt loam compared to detph 30-75cm silt clay loam in soil united states of america state of tennessee cultivated habitat 2019-01-12v4No1 / 1648
422amnon high in ph 7-8 compared to ph 5-6 in soil paddy field soil cultivated habitat china oryza sativa heilongjiang province 2018-12-04v4No1 / 3267
462amnon high in rhizosphere compared to root in united states of america state of tennessee cultivated habitat populus tree 2019-01-13v4No1 / 4630

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