Summary for ontology term: cultivated habitat

Number of annotations with term: 92

Annotations:

common ontology terms
term enrichment score
TermScore
cultivated habitat0.941176
populus0.342857
orchard0.281250
rhizosphere0.249344
state of tennessee0.247934
citrus0.246575
tree0.226415
greenhouse soil0.218182
soil0.197292
guanajuato0.192982
ph 7-80.178571
paddy field soil0.176000
farm0.174757
mexico0.149660
fragaria x ananassa0.148148
strawberry0.148148
yellow brown soil0.148148
nanjing city prefecture0.148148
shanghai proper0.148148
clay loam0.148148
agave0.148148
agave tequiliana0.148148
oryza sativa0.139241
ph>70.137931
heilongjiang province0.137931
desert0.130178
agricultural feature0.129032
stem0.110236
china0.108767
root0.101818
leaf0.101408
silt clay loam0.098039
depth 0-30cm0.098039
silt loam0.098039
populus trichocarpa x deltoides0.098039
populus deltoides0.098039
xining city prefecture0.080000
field0.080000
organic farming0.080000
depth 30-75cm0.080000
npk fertilizer0.076923
brazil0.067797
continuous cropping0.061224
age 5 years0.061224
age 10 years0.061224
LOWER IN populus trichocarpa x deltoides0.061224
LOWER IN populus deltoides0.061224
age 1 year0.056075
reunion island0.041667
ph 4-60.041667
jerusalem artichoke0.041667
helianthus tuberosus0.041667
leaf endosphere0.041667
root endosphere0.041667
leaf surface0.041667
soybean0.040816
glycine max0.040000
wheat0.040000
ph 5-60.040000
ph 6-70.040000
triticum aestivum0.039216
south africa0.038462
italy0.036364
kingdom of spain0.036364
LOWER IN rhizosphere0.034483
australia0.032787
united states of america0.022008
LOWER IN mediterranean0.021277
LOWER IN semi-arid0.021277
mediterranean0.021277
LOWER IN age 5 years0.021277
LOWER IN age 10 years0.021277
LOWER IN continuous cropping0.021277
yunnan province0.021277
hubei province0.021277
LOWER IN ph 7-80.021277
depth 30-75cm0.021277
LOWER IN depth 0-30cm0.021277
LOWER IN silt loam0.021277
LOWER IN detph 30-75cm0.021277
LOWER IN silt clay loam0.021277
LOWER IN stem0.021277
subtropical0.021053
semi-arid0.021053
LOWER IN subtropical0.021053
LOWER IN spring0.020833
LOWER IN age 1 year0.020833
jiangsu province0.020833
LOWER IN ph 5-60.020833
hunan province0.020619
spring0.020408
LOWER IN leaf0.020408
LOWER IN root0.019802
LOWER IN winter0.019231
LOWER IN soil0.019231
winter0.019048
Fraction of dbbact annotations with this term covered by the query
TermScore
cultivated habitat0.888889
greenhouse soil0.666667
orchard0.500000
reunion island0.500000
LOWER IN mediterranean0.500000
LOWER IN semi-arid0.500000
mediterranean0.500000
fragaria x ananassa0.500000
strawberry0.500000
yellow brown soil0.500000
nanjing city prefecture0.500000
LOWER IN age 5 years0.500000
LOWER IN age 10 years0.500000
LOWER IN continuous cropping0.500000
continuous cropping0.500000
age 5 years0.500000
age 10 years0.500000
ph 4-60.500000
xining city prefecture0.500000
field0.500000
jerusalem artichoke0.500000
helianthus tuberosus0.500000
ph 7-80.500000
shanghai proper0.500000
clay loam0.500000
organic farming0.500000
yunnan province0.500000
hubei province0.500000
LOWER IN ph 7-80.500000
depth 30-75cm0.500000
LOWER IN depth 0-30cm0.500000
LOWER IN silt loam0.500000
silt clay loam0.500000
depth 0-30cm0.500000
silt loam0.500000
LOWER IN detph 30-75cm0.500000
LOWER IN silt clay loam0.500000
populus0.500000
depth 30-75cm0.500000
populus trichocarpa x deltoides0.500000
populus deltoides0.500000
LOWER IN populus trichocarpa x deltoides0.500000
LOWER IN populus deltoides0.500000
LOWER IN stem0.500000
agave0.500000
leaf endosphere0.500000
guanajuato0.500000
agave tequiliana0.500000
root endosphere0.500000
leaf surface0.500000
citrus0.333333
subtropical0.333333
semi-arid0.333333
LOWER IN subtropical0.333333
soybean0.333333
ph>70.333333
npk fertilizer0.333333
paddy field soil0.333333
heilongjiang province0.333333
LOWER IN spring0.250000
LOWER IN age 1 year0.250000
glycine max0.250000
wheat0.250000
agricultural feature0.250000
jiangsu province0.250000
ph 5-60.250000
LOWER IN ph 5-60.250000
ph 6-70.250000
age 1 year0.200000
triticum aestivum0.200000
hunan province0.200000
state of tennessee0.200000
tree0.200000
stem0.200000
mexico0.200000
rhizosphere0.178571
south africa0.166667
spring0.166667
oryza sativa0.166667
LOWER IN leaf0.166667
farm0.157895
brazil0.153846
root0.153846
desert0.142857
soil0.120000
italy0.111111
kingdom of spain0.111111
LOWER IN root0.111111
leaf0.105263
LOWER IN winter0.083333
LOWER IN rhizosphere0.083333
LOWER IN soil0.083333
winter0.076923
australia0.066667
china0.064103
united states of america0.011364
Fraction of annotations for the query sequences containing the term
TermScore
cultivated habitat1.000000
soil0.554348
rhizosphere0.413043
china0.358696
united states of america0.347826
state of tennessee0.326087
populus0.260870
tree0.260870
citrus0.195652
orchard0.195652
farm0.195652
greenhouse soil0.130435
paddy field soil0.119565
oryza sativa0.119565
desert0.119565
guanajuato0.119565
mexico0.119565
ph 7-80.108696
leaf0.097826
fragaria x ananassa0.086957
strawberry0.086957
yellow brown soil0.086957
nanjing city prefecture0.086957
ph>70.086957
agricultural feature0.086957
shanghai proper0.086957
clay loam0.086957
heilongjiang province0.086957
agave0.086957
agave tequiliana0.086957
stem0.076087
root0.076087
silt clay loam0.054348
depth 0-30cm0.054348
silt loam0.054348
populus trichocarpa x deltoides0.054348
populus deltoides0.054348
brazil0.043478
xining city prefecture0.043478
field0.043478
npk fertilizer0.043478
organic farming0.043478
depth 30-75cm0.043478
age 1 year0.032609
continuous cropping0.032609
age 5 years0.032609
age 10 years0.032609
LOWER IN populus trichocarpa x deltoides0.032609
LOWER IN populus deltoides0.032609
australia0.021739
italy0.021739
reunion island0.021739
kingdom of spain0.021739
south africa0.021739
glycine max0.021739
soybean0.021739
ph 4-60.021739
wheat0.021739
triticum aestivum0.021739
jerusalem artichoke0.021739
helianthus tuberosus0.021739
ph 5-60.021739
ph 6-70.021739
LOWER IN rhizosphere0.021739
leaf endosphere0.021739
root endosphere0.021739
leaf surface0.021739
subtropical0.010870
LOWER IN mediterranean0.010870
LOWER IN semi-arid0.010870
mediterranean0.010870
semi-arid0.010870
LOWER IN subtropical0.010870
spring0.010870
LOWER IN winter0.010870
winter0.010870
LOWER IN spring0.010870
LOWER IN age 5 years0.010870
LOWER IN age 10 years0.010870
LOWER IN continuous cropping0.010870
LOWER IN age 1 year0.010870
jiangsu province0.010870
yunnan province0.010870
hunan province0.010870
hubei province0.010870
LOWER IN ph 7-80.010870
LOWER IN ph 5-60.010870
depth 30-75cm0.010870
LOWER IN depth 0-30cm0.010870
LOWER IN silt loam0.010870
LOWER IN detph 30-75cm0.010870
LOWER IN silt clay loam0.010870
LOWER IN soil0.010870
LOWER IN stem0.010870
LOWER IN leaf0.010870
LOWER IN root0.010870
Exp. ID User ID Description Date Sequences
422amnonhighfreq soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province2018-12-021 / 2
422amnonhighfreq soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province, ph 6-72018-12-041 / 2
444amnonhighfreq rhizosphere, fragaria x ananassa, strawberry, china, greenhouse soil, farm, cultivated habitat, yellow brown soil, nanjing city prefecture, age 1 year2019-01-071 / 3
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, rhizosphere, populus, tree, depth 0-30cm, silt loam2019-01-131 / 3
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, stem, populus deltoides2019-01-131 / 3
415amnonhighfreq rhizosphere, soil, citrus, australia, orchard, cultivated habitat2018-11-271 / 4
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, italy2018-11-271 / 4
420amnonhigh freq. in soil of vegetable open field (highfreq china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, npk fertilizer)2018-12-021 / 4
420amnonhigh freq. in soil of vegetables in organic plastic tunnel (highfreq china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, organic farming, greenhouse soil)2018-12-021 / 4
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, soil, depth 0-30cm, silt loam2019-01-131 / 4
360amnonhighfreq desert, soil, mexico, guanajuato, cultivated habitat2018-08-211 / 4
420amnonhigh freq. in soil of vegetable in plastic tunnel (highfreq china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, npk fertilizer, greenhouse soil)2018-12-021 / 5
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, reunion island2018-11-271 / 6
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, united states of america2018-11-271 / 6
444amnonhighfreq rhizosphere, fragaria x ananassa, strawberry, china, greenhouse soil, farm, cultivated habitat, yellow brown soil, nanjing city prefecture, continuous cropping, age 5 years, age 10 years2019-01-071 / 6
420amnonhigh freq. in soil of vegetables in organic field (highfreq china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, organic farming)2018-12-021 / 6
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, depth 30-75cm, silt clay loam, rhizosphere, populus, tree2019-01-131 / 6
360amnonhighfreq desert, soil, mexico, guanajuato, cultivated habitat2018-08-211 / 6
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, china2018-11-271 / 7
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, brazil2018-11-271 / 8
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, south africa2018-11-271 / 8
474amnonhighfreq farm, cultivated habitat, soil, soybean, glycine max, ph 4-6, brazil2019-01-161 / 8
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, soil, depth 30-75cm, silt clay loam2019-01-131 / 8
415amnonhighfreq rhizosphere, soil, citrus, orchard, cultivated habitat, kingdom of spain2018-11-271 / 9
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, root2019-01-131 / 9
360amnonhighfreq agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-211 / 10
444amnon high in spring compared to winter in rhizosphere fragaria x ananassa strawberry china greenhouse soil farm cultivated habitat yellow brown soil nanjing city prefecture 2019-01-071 / 11
444amnon high in winter compared to spring in rhizosphere fragaria x ananassa strawberry china greenhouse soil farm cultivated habitat yellow brown soil nanjing city prefecture 2019-01-071 / 11
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, populus trichocarpa x deltoides, stem2019-01-131 / 12
360amnonhighfreq desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-211 / 12
452amnonhighfreq rhizosphere, china, xining city prefecture, cultivated habitat, field, jerusalem artichoke, helianthus tuberosus2019-01-101 / 13
462amnonhighfreq united states of america, state of tennessee, cultivated habitat, populus, tree, leaf2019-01-131 / 15
360amnonhighfreq agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated habitat2018-08-211 / 16
360amnonhighfreq agave, desert, root, root endosphere, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-211 / 17
452amnonhighfreq rhizosphere, china, xining city prefecture, cultivated habitat, field, wheat, triticum aestivum2019-01-101 / 24
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, leaf2019-01-131 / 28
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, stem, populus deltoides2019-01-131 / 29
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, populus trichocarpa x deltoides, stem2019-01-131 / 48
462amnoncommon united states of america, state of tennessee, cultivated habitat, populus, tree, root2019-01-131 / 51
462amnon high in root compared to rhizosphere in united states of america state of tennessee cultivated habitat populus tree 2019-01-131 / 57
360amnoncommon agave, desert, root, root endosphere, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-211 / 62
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree leaf 2019-01-131 / 76
360amnoncommon agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated habitat2018-08-211 / 78
360amnoncommon desert, soil, rhizosphere, agave, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-211 / 98
462amnon high in soil compared to rhizosphere in united states of america state of tennessee cultivated habitat populus tree 2019-01-121 / 131
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree stem 2019-01-131 / 166
452amnoncommon rhizosphere, china, xining city prefecture, cultivated habitat, field, jerusalem artichoke, helianthus tuberosus2019-01-101 / 178
360amnoncommon agave, desert, leaf, leaf surface, mexico, guanajuato, agave tequiliana, cultivated habitat2018-08-211 / 210
452amnoncommon rhizosphere, china, xining city prefecture, cultivated habitat, field, wheat, triticum aestivum2019-01-101 / 249
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree stem 2019-01-131 / 249
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree root 2019-01-131 / 254
415amnonlower in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in mediterranean semi-arid compared to subtropical in rhizosphere soil citrus orchard cultivated habitat )2018-11-271 / 264
462amnon high in populus trichocarpa x deltoides compared to populus deltoides in united states of america state of tennessee cultivated habitat populus tree root 2019-01-131 / 300
415amnonhigher in citrus from humid subtropical compared to mediterranean and semi-arid climate ( high in subtropical compared to mediterranean semi-arid in rhizosphere soil citrus orchard cultivated habitat )2018-11-271 / 458
462amnon high in stem compared to leaf in united states of america state of tennessee cultivated habitat populus tree 2019-01-131 / 477
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, united states of america2018-11-271 / 494
360amnoncommon desert, soil, mexico, guanajuato, cultivated habitat2018-08-211 / 500
462amnon high in populus deltoides compared to populus trichocarpa x deltoides in united states of america state of tennessee cultivated habitat populus tree leaf 2019-01-131 / 559
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, south africa2018-11-271 / 600
444amnonhigher in continuously cropped strawberry soil ( high in continuous cropping age 5 years age 10 years compared to age 1 year in rhizosphere fragaria x ananassa strawberry china greenhouse soil farm cultivated habitat yellow brown soil nanjing city prefecture )2019-01-071 / 602
462amnon high in depth 30-75cm silt clay loam compared to depth 0-30cm silt loam in soil united states of america state of tennessee cultivated habitat 2019-01-121 / 665
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province, ph 6-72018-12-041 / 682
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, reunion island2018-11-271 / 721
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province, ph 5-62018-12-041 / 726
462amnoncommon united states of america, state of tennessee, cultivated habitat, soil, depth 30-75cm, silt clay loam2019-01-131 / 728
415amnoncommon rhizosphere, soil, citrus, australia, orchard, cultivated habitat2018-11-271 / 743
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, yunnan province2018-12-021 / 821
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, china2018-11-271 / 830
444amnoncommon rhizosphere, fragaria x ananassa, strawberry, china, greenhouse soil, farm, cultivated habitat, yellow brown soil, nanjing city prefecture, continuous cropping, age 5 years, age 10 years2019-01-071 / 833
462amnon high in leaf compared to stem in united states of america state of tennessee cultivated habitat populus tree 2019-01-131 / 890
462amnoncommon united states of america, state of tennessee, cultivated habitat, depth 30-75cm, silt clay loam, rhizosphere, populus, tree2019-01-131 / 908
462amnoncommon united states of america, state of tennessee, cultivated habitat, soil, depth 0-30cm, silt loam2019-01-131 / 938
422amnoncommon soil, paddy field soil, cultivated habitat, china, jiangsu province, oryza sativa2018-12-021 / 957
474amnoncommon soil, cultivated habitat, farm, glycine max, soybean, ph 4-6, brazil2019-01-161 / 974
462amnoncommon united states of america, state of tennessee, cultivated habitat, rhizosphere, populus, tree, depth 0-30cm, silt loam2019-01-131 / 997
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province2018-12-021 / 1049
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, brazil2018-11-271 / 1091
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, kingdom of spain2018-11-271 / 1099
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, heilongjiang province, ph 7-82018-12-041 / 1169
444amnonlower in continuously cropped strawberry soil ( high in age 1 year compared to age 5 years age 10 years continuous cropping in rhizosphere fragaria x ananassa strawberry china greenhouse soil farm cultivated habitat yellow brown soil nanjing city prefecture )2019-01-071 / 1221
420amnoncommon in soil of vegetables in organic field (common china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, organic farming)2018-12-021 / 1240
415amnoncommon rhizosphere, soil, citrus, orchard, cultivated habitat, italy2018-11-271 / 1279
420amnoncommon in soil of vegetables in organic plastic tunnel (common china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, organic farming, greenhouse soil)2018-12-021 / 1294
420amnoncommon in soil of vegetable open field (common china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, npk fertilizer)2018-12-021 / 1376
420amnonhigh freq. in soil of vegetable in plastic tunnel (common china, soil, ph>7, ph 7-8, agricultural feature, farm, shanghai proper, clay loam, cultivated habitat, npk fertilizer, greenhouse soil)2018-12-021 / 1396
422amnoncommon soil, paddy field soil, cultivated habitat, china, oryza sativa, hunan province, hubei province2018-12-021 / 1399
462amnon high in rhizosphere compared to soil in united states of america state of tennessee cultivated habitat populus tree 2019-01-121 / 1428
444amnoncommon rhizosphere, fragaria x ananassa, strawberry, china, greenhouse soil, farm, cultivated habitat, yellow brown soil, nanjing city prefecture, age 1 year2019-01-071 / 1439
422amnon high in ph 5-6 compared to ph 7-8 in soil paddy field soil cultivated habitat china oryza sativa heilongjiang province 2018-12-041 / 1634
462amnon high in depth 0-30cm silt loam compared to detph 30-75cm silt clay loam in soil united states of america state of tennessee cultivated habitat 2019-01-121 / 1648
422amnon high in ph 7-8 compared to ph 5-6 in soil paddy field soil cultivated habitat china oryza sativa heilongjiang province 2018-12-041 / 3267
462amnon high in rhizosphere compared to root in united states of america state of tennessee cultivated habitat populus tree 2019-01-131 / 4630

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