Summary for ontology term: cystic fibrosis

Number of annotations with term: 11

Annotations:

common ontology terms
term enrichment score
TermScore
cystic fibrosis0.952381
mild disease course0.521739
state of new hampshire0.521739
colonized germ free0.421053
seattle0.421053
cftr s489x0.352941
protected brush sampling0.266667
sputum0.210526
mucus0.205128
bronchoalveolar lavage0.173913
lung0.170213
LOWER IN cystic fibrosis0.153846
LOWER IN cftr s489x0.153846
LOWER IN sinusitis0.153846
sinusoidal space0.142857
paranasal sinus0.142857
mucosa0.133333
mouse0.036530
mus musculus0.032389
united states of america0.028169
homo sapiens0.019986
adult0.017884
research facility0.017582
LOWER IN control0.012987
control0.012903
feces0.008138
Fraction of dbbact annotations with this term covered by the query
TermScore
cystic fibrosis1.000000
LOWER IN cystic fibrosis0.500000
LOWER IN cftr s489x0.500000
colonized germ free0.500000
seattle0.500000
cftr s489x0.500000
LOWER IN sinusitis0.500000
mild disease course0.500000
state of new hampshire0.500000
protected brush sampling0.500000
sinusoidal space0.333333
paranasal sinus0.333333
mucosa0.250000
sputum0.250000
bronchoalveolar lavage0.166667
mucus0.142857
lung0.111111
mouse0.019231
mus musculus0.016949
united states of america0.014286
homo sapiens0.010152
adult0.009091
research facility0.009009
LOWER IN control0.006993
control0.006944
feces0.004115
Fraction of annotations for the query sequences containing the term
TermScore
united states of america1.000000
cystic fibrosis0.909091
homo sapiens0.636364
adult0.545455
mild disease course0.545455
state of new hampshire0.545455
colonized germ free0.363636
seattle0.363636
feces0.363636
research facility0.363636
mus musculus0.363636
mouse0.363636
lung0.363636
mucus0.363636
cftr s489x0.272727
sputum0.181818
bronchoalveolar lavage0.181818
protected brush sampling0.181818
control0.090909
LOWER IN cystic fibrosis0.090909
LOWER IN cftr s489x0.090909
mucosa0.090909
sinusoidal space0.090909
paranasal sinus0.090909
LOWER IN sinusitis0.090909
LOWER IN control0.090909
Exp. ID User ID Description Date Region Flag Sequences
228amnonhigh in sinus brush of CF patients compared to other sinusitis ( high in cystic fibrosis compared to sinusitis in homo sapiens mucosa sinusoidal space paranasal sinus united states of america )2017-10-31v4No1 / 0
646amnondominant protected brush sampling, lung, mucus, adult, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 5
646amnoncommon lung, bronchoalveolar lavage, mucus, adult, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 6
646amnondominant lung, bronchoalveolar lavage, mucus, adult, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 7
646amnoncommon protected brush sampling, lung, mucus, adult, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 9
646amnondominant adult, sputum, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 13
619amnondominant cystic fibrosis, cftr s489x, colonized germ free, seattle, united states of america, feces, research facility, mus musculus, mouse2020-05-04v3No1 / 19
619amnon high in control compared to cystic fibrosis cftr s489x in colonized germ free seattle united states of america feces research facility mus musculus mouse 2020-05-04v3No1 / 21
619amnon high in cystic fibrosis cftr s489x compared to control in colonized germ free seattle united states of america feces research facility mus musculus mouse 2020-05-04v3No1 / 24
646amnoncommon adult, sputum, mild disease course, cystic fibrosis, homo sapiens, state of new hampshire, united states of america2020-09-06v4No1 / 32
619amnoncommon cystic fibrosis, cftr s489x, colonized germ free, seattle, united states of america, feces, research facility, mus musculus, mouse2020-05-04v3No1 / 63

Problems / suggestions? Please email info AT dbbact DOT org