Summary for ontology term: duodenum

Number of annotations with term: 39

Annotations:

common ontology terms
term enrichment score
TermScore
duodenum0.798732
LOWER IN duodenum0.428224
ileum0.290909
jejunum0.255319
africa0.253968
centrocercus urophasianus0.235294
greater sage-grouse0.235294
state of wyoming0.235294
LOWER IN jejunum0.218978
LOWER IN ileum0.204082
lamb0.190476
age 6 weeks0.190476
new zealand0.190476
ovis aries0.189189
caecum0.186047
LOWER IN caecum0.185185
new delhi0.170213
gastrointestinal system0.156863
colon0.146341
LOWER IN colon0.146341
LOWER IN feces0.140351
sheep0.137931
LOWER IN left colon0.133333
central african republic0.133333
bangui0.133333
antananarivo0.133333
madagascar0.133333
stunted growth0.133333
bird0.129032
LOWER IN right colon0.129032
india0.119403
united kingdom0.119048
small intestine0.117647
sus scrofa0.112360
pig0.112360
left colon0.093023
right colon0.090909
dog0.087719
LOWER IN rectum0.086957
LOWER IN stomach0.085106
rectum0.081633
stomach0.075472
canis lupus familiaris0.074627
child0.066946
mus musculus0.050955
age 30 days0.048780
dairy0.048780
esophagus0.048780
LOWER IN esophagus0.048780
LOWER IN transverse colon0.048780
transverse colon0.048780
LOWER IN madagascar0.048780
LOWER IN antananarivo0.048780
LOWER IN central african republic0.048780
LOWER IN bangui0.048780
LOWER IN gizzard0.048780
gizzard0.048780
LOWER IN small intestine0.046512
LOWER IN mouth0.043478
obsolete_juvenile stage0.040816
italy0.038462
united states of america0.036298
mouth0.032787
feces0.028070
homo sapiens0.019465
research facility0.016878
Fraction of dbbact annotations with this term covered by the query
TermScore
colon1.500000
LOWER IN colon1.500000
caecum1.000000
duodenum0.900000
LOWER IN duodenum0.888889
jejunum0.750000
LOWER IN jejunum0.750000
LOWER IN ileum0.500000
ileum0.500000
age 30 days0.500000
dairy0.500000
esophagus0.500000
LOWER IN esophagus0.500000
LOWER IN transverse colon0.500000
LOWER IN left colon0.500000
transverse colon0.500000
left colon0.500000
new delhi0.500000
central african republic0.500000
bangui0.500000
LOWER IN madagascar0.500000
LOWER IN antananarivo0.500000
antananarivo0.500000
madagascar0.500000
LOWER IN central african republic0.500000
LOWER IN bangui0.500000
stunted growth0.500000
centrocercus urophasianus0.500000
greater sage-grouse0.500000
state of wyoming0.500000
LOWER IN gizzard0.500000
gizzard0.500000
LOWER IN right colon0.400000
right colon0.400000
gastrointestinal system0.333333
LOWER IN caecum0.333333
africa0.333333
LOWER IN rectum0.285714
lamb0.250000
age 6 weeks0.250000
new zealand0.250000
LOWER IN stomach0.250000
small intestine0.250000
LOWER IN small intestine0.250000
LOWER IN feces0.222222
ovis aries0.200000
rectum0.200000
stomach0.142857
LOWER IN mouth0.142857
india0.142857
sheep0.125000
united kingdom0.111111
bird0.111111
obsolete_juvenile stage0.100000
sus scrofa0.100000
pig0.100000
italy0.076923
dog0.066667
canis lupus familiaris0.052632
mouth0.045455
child0.040000
mus musculus0.033898
united states of america0.019048
feces0.016260
homo sapiens0.010050
research facility0.008929
Fraction of annotations for the query sequences containing the term
TermScore
duodenum0.717949
united states of america0.384615
homo sapiens0.307692
LOWER IN duodenum0.282051
ileum0.205128
africa0.205128
child0.205128
ovis aries0.179487
lamb0.153846
age 6 weeks0.153846
research facility0.153846
new zealand0.153846
sheep0.153846
jejunum0.153846
bird0.153846
centrocercus urophasianus0.153846
greater sage-grouse0.153846
state of wyoming0.153846
LOWER IN ileum0.128205
LOWER IN jejunum0.128205
LOWER IN caecum0.128205
sus scrofa0.128205
pig0.128205
united kingdom0.128205
canis lupus familiaris0.128205
dog0.128205
mus musculus0.102564
gastrointestinal system0.102564
LOWER IN feces0.102564
caecum0.102564
feces0.102564
new delhi0.102564
india0.102564
colon0.076923
LOWER IN colon0.076923
LOWER IN right colon0.076923
LOWER IN left colon0.076923
small intestine0.076923
central african republic0.076923
bangui0.076923
antananarivo0.076923
madagascar0.076923
stunted growth0.076923
stomach0.051282
LOWER IN rectum0.051282
rectum0.051282
LOWER IN stomach0.051282
right colon0.051282
left colon0.051282
age 30 days0.025641
obsolete_juvenile stage0.025641
italy0.025641
dairy0.025641
esophagus0.025641
mouth0.025641
LOWER IN esophagus0.025641
LOWER IN mouth0.025641
LOWER IN transverse colon0.025641
transverse colon0.025641
LOWER IN small intestine0.025641
LOWER IN madagascar0.025641
LOWER IN antananarivo0.025641
LOWER IN central african republic0.025641
LOWER IN bangui0.025641
LOWER IN gizzard0.025641
gizzard0.025641
Exp. ID User ID Description Date Region Flag Sequences
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to duodenum jejunum caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 0
301amnonhost 18S dna (dog or cat or human) (other canis lupus familiaris, dog, united states of america, duodenum)2018-03-05v4No1 / 0
558amnon high in duodenum compared to gizzard in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 0
363amnondominant ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, duodenum2018-08-29v4No1 / 2
301amnon high in duodenum ileum compared to colon rectum in canis lupus familiaris dog united states of america 2018-03-05v4No1 / 4
301amnondominant canis lupus familiaris, dog, united states of america, duodenum2018-03-05v4No1 / 8
649amnondominant duodenum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 9
256amnondominant sus scrofa, pig, duodenum, jejunum, ileum, united kingdom2017-11-26v4No1 / 9
352amnonhigh freq. in duodenal biopsies (dominant homo sapiens, new delhi, duodenum, small intestine, india)2018-07-30v4No1 / 16
649amnon high in jejunum duodenum compared to ileum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 17
558amnondominant bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming, duodenum2019-09-20v4No1 / 18
425amnondominant homo sapiens, africa, child, duodenum, antananarivo, madagascar, stunted growth2018-12-08v4No1 / 21
13amnon high in esophagus stomach duodenum ileum mouth compared to caecum colon rectum feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 24
425amnondominant homo sapiens, africa, child, duodenum, stunted growth, central african republic, bangui2018-12-08v4No1 / 24
425amnon high in central african republic bangui compared to madagascar antananarivo in homo sapiens africa child duodenum 2018-12-08v4No1 / 32
14amnon high in stomach duodenum jejunum ileum compared to caecum right colon transverse colon left colon feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 41
649amnoncommon duodenum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 44
558amnoncommon bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming, duodenum2019-09-20v4No1 / 44
301amnoncommon canis lupus familiaris, dog, united states of america, duodenum2018-03-05v4No1 / 46
558amnon high in gizzard compared to duodenum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 47
14amnon high in caecum right colon transverse colon left colon feces compared to stomach duodenum jejunum ileum in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 50
558amnon high in duodenum compared to caecum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 63
301amnon high in colon rectum compared to duodenum ileum in canis lupus familiaris dog united states of america 2018-03-05v4No1 / 78
649amnon high in ileum compared to jejunum duodenum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 91
425amnon high in antananarivo madagascar compared to central african republic bangui in homo sapiens africa child duodenum 2018-12-08v4No1 / 102
352amnoncommon in duodenal biopsies (common homo sapiens, new delhi, duodenum, small intestine, india)2018-07-30v4No1 / 120
425amnoncommon homo sapiens, africa, child, duodenum, antananarivo, madagascar2018-12-08v4No1 / 122
425amnoncommon homo sapiens, africa, child, duodenum, stunted growth, central african republic, bangui2018-12-08v4No1 / 124
352amnon high in feces compared to small intestine duodenum in homo sapiens new delhi india 2018-07-30v4No1 / 189
649amnon high in jejunum duodenum compared to colon in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 294
13amnon high in caecum colon rectum feces compared to esophagus stomach duodenum ileum mouth in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 315
256amnoncommon sus scrofa, pig, duodenum, jejunum, ileum, united kingdom2017-11-26v4No1 / 379
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 386
425amnon high in feces compared to duodenum in homo sapiens africa child 2018-12-08v4No1 / 415
558amnon high in caecum compared to duodenum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 487
352amnon high in small intestine duodenum compared to feces in homo sapiens new delhi india 2018-07-30v4No1 / 544
425amnon high in duodenum compared to feces in homo sapiens africa child 2018-12-08v4No1 / 621
256amnonlower in small intestine compared to colon in pigs ( high in caecum right colon left colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-26v4No1 / 739
649amnon high in colon compared to jejunum duodenum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 1260

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