Summary for ontology term: duodenum

Number of annotations with term: 43

Annotations:

common ontology terms
term enrichment score
TermScore
duodenum0.804150
LOWER IN duodenum0.426036
jejunum0.331797
ileum0.238806
LOWER IN jejunum0.237624
centrocercus urophasianus0.218182
greater sage-grouse0.218182
state of wyoming0.218182
africa0.213333
small intestine0.196721
LOWER IN caecum0.189274
lamb0.179104
new zealand0.179104
LOWER IN ileum0.178571
ovis aries0.164706
age 6 weeks0.164384
jinzhou city prefecture0.156863
new delhi0.156863
gastrointestinal system0.140351
caecum0.129870
LOWER IN feces0.125000
LOWER IN left colon0.122449
bangui0.122449
antananarivo0.122449
stunted growth0.122449
LOWER IN right colon0.118812
sheep0.116505
bird0.116505
central african republic0.115385
madagascar0.115385
india0.106667
LOWER IN colon0.101695
united kingdom0.097087
colon0.093750
left colon0.085106
right colon0.083333
LOWER IN small intestine0.081633
sus scrofa0.081301
pig0.081301
LOWER IN rectum0.080000
LOWER IN stomach0.076923
rectum0.075472
chicken0.074766
gallus gallus0.074766
stomach0.067797
dog0.065359
canis lupus familiaris0.057803
child0.048338
mus musculus0.047904
dairy0.044444
LOWER IN esophagus0.044444
LOWER IN transverse colon0.044444
transverse colon0.044444
LOWER IN madagascar0.044444
LOWER IN antananarivo0.044444
LOWER IN central african republic0.044444
LOWER IN bangui0.044444
LOWER IN gizzard0.044444
gizzard0.044444
age 30 days0.043478
esophagus0.042553
LOWER IN mouth0.040000
obsolete_juvenile stage0.037736
italy0.032787
united states of america0.031687
mouth0.029412
research facility0.026385
feces0.023121
homo sapiens0.014916
china0.012066
Fraction of dbbact annotations with this term covered by the query
TermScore
duodenum0.909091
LOWER IN duodenum0.900000
jejunum0.800000
LOWER IN jejunum0.800000
dairy0.500000
LOWER IN esophagus0.500000
LOWER IN transverse colon0.500000
LOWER IN left colon0.500000
transverse colon0.500000
left colon0.500000
jinzhou city prefecture0.500000
new delhi0.500000
bangui0.500000
LOWER IN madagascar0.500000
LOWER IN antananarivo0.500000
antananarivo0.500000
LOWER IN central african republic0.500000
LOWER IN bangui0.500000
stunted growth0.500000
centrocercus urophasianus0.500000
greater sage-grouse0.500000
state of wyoming0.500000
LOWER IN gizzard0.500000
gizzard0.500000
LOWER IN right colon0.400000
right colon0.400000
LOWER IN ileum0.384615
ileum0.333333
age 30 days0.333333
small intestine0.333333
LOWER IN small intestine0.333333
central african republic0.333333
madagascar0.333333
LOWER IN caecum0.294118
gastrointestinal system0.285714
LOWER IN rectum0.285714
lamb0.250000
new zealand0.250000
esophagus0.250000
africa0.250000
LOWER IN stomach0.222222
age 6 weeks0.200000
rectum0.200000
LOWER IN feces0.190476
LOWER IN colon0.187500
ovis aries0.166667
caecum0.147059
colon0.142857
LOWER IN mouth0.142857
stomach0.125000
india0.125000
sheep0.100000
obsolete_juvenile stage0.100000
bird0.100000
united kingdom0.083333
chicken0.062500
gallus gallus0.062500
sus scrofa0.062500
pig0.062500
italy0.055556
dog0.045455
mouth0.040000
canis lupus familiaris0.038462
mus musculus0.032258
child0.027778
united states of america0.016598
research facility0.013986
feces0.013201
homo sapiens0.007663
china0.006452
Fraction of annotations for the query sequences containing the term
TermScore
duodenum0.720930
united states of america0.348837
LOWER IN duodenum0.279070
homo sapiens0.279070
research facility0.232558
jejunum0.209302
ileum0.186047
africa0.186047
child0.186047
ovis aries0.162791
lamb0.139535
age 6 weeks0.139535
new zealand0.139535
sheep0.139535
LOWER IN jejunum0.139535
LOWER IN caecum0.139535
small intestine0.139535
bird0.139535
centrocercus urophasianus0.139535
greater sage-grouse0.139535
state of wyoming0.139535
LOWER IN ileum0.116279
caecum0.116279
sus scrofa0.116279
pig0.116279
united kingdom0.116279
canis lupus familiaris0.116279
dog0.116279
mus musculus0.093023
gastrointestinal system0.093023
LOWER IN feces0.093023
feces0.093023
jinzhou city prefecture0.093023
china0.093023
chicken0.093023
gallus gallus0.093023
new delhi0.093023
india0.093023
colon0.069767
LOWER IN colon0.069767
LOWER IN right colon0.069767
LOWER IN left colon0.069767
central african republic0.069767
bangui0.069767
antananarivo0.069767
madagascar0.069767
stunted growth0.069767
stomach0.046512
LOWER IN rectum0.046512
rectum0.046512
LOWER IN stomach0.046512
right colon0.046512
left colon0.046512
LOWER IN small intestine0.046512
age 30 days0.023256
obsolete_juvenile stage0.023256
italy0.023256
dairy0.023256
esophagus0.023256
mouth0.023256
LOWER IN esophagus0.023256
LOWER IN mouth0.023256
LOWER IN transverse colon0.023256
transverse colon0.023256
LOWER IN madagascar0.023256
LOWER IN antananarivo0.023256
LOWER IN central african republic0.023256
LOWER IN bangui0.023256
LOWER IN gizzard0.023256
gizzard0.023256
Exp. ID User ID Description Date Region Flag Sequences
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to duodenum jejunum caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 1
301amnonhost 18S dna (dog or cat or human) (other canis lupus familiaris, dog, united states of america, duodenum)2018-03-05v4No1 / 1
558amnon high in duodenum compared to gizzard in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 1
363amnondominant ovis aries, age 30 days, obsolete_juvenile stage, italy, dairy, duodenum2018-08-29v4No1 / 3
301amnon high in duodenum ileum compared to colon rectum in canis lupus familiaris dog united states of america 2018-03-05v4No1 / 5
301amnondominant canis lupus familiaris, dog, united states of america, duodenum2018-03-05v4No1 / 9
649amnondominant duodenum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 10
780amnondominant jinzhou city prefecture, china, research facility, chicken, gallus gallus, jejunum, duodenum, small intestine2021-04-28v3No1 / 10
256amnondominant sus scrofa, pig, duodenum, jejunum, ileum, united kingdom2017-11-26v4No1 / 10
352amnonhigh freq. in duodenal biopsies (dominant homo sapiens, new delhi, duodenum, small intestine, india)2018-07-30v4No1 / 17
649amnon high in jejunum duodenum compared to ileum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 18
558amnondominant bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming, duodenum2019-09-20v4No1 / 19
425amnondominant homo sapiens, africa, child, duodenum, antananarivo, madagascar, stunted growth2018-12-08v4No1 / 22
13amnon high in esophagus stomach duodenum ileum mouth compared to caecum colon rectum feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 25
425amnondominant homo sapiens, africa, child, duodenum, stunted growth, central african republic, bangui2018-12-08v4No1 / 25
425amnon high in central african republic bangui compared to madagascar antananarivo in homo sapiens africa child duodenum 2018-12-08v4No1 / 33
14amnon high in stomach duodenum jejunum ileum compared to caecum right colon transverse colon left colon feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 42
649amnoncommon duodenum, lamb, age 6 weeks, research facility, new zealand, ovis aries, sheep2020-09-07v3No1 / 45
558amnoncommon bird, centrocercus urophasianus, greater sage-grouse, united states of america, state of wyoming, duodenum2019-09-20v4No1 / 45
301amnoncommon canis lupus familiaris, dog, united states of america, duodenum2018-03-05v4No1 / 47
558amnon high in gizzard compared to duodenum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 48
14amnon high in caecum right colon transverse colon left colon feces compared to stomach duodenum jejunum ileum in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 51
558amnon high in duodenum compared to caecum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 64
301amnon high in colon rectum compared to duodenum ileum in canis lupus familiaris dog united states of america 2018-03-05v4No1 / 79
649amnon high in ileum compared to jejunum duodenum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 92
425amnon high in antananarivo madagascar compared to central african republic bangui in homo sapiens africa child duodenum 2018-12-08v4No1 / 103
352amnoncommon in duodenal biopsies (common homo sapiens, new delhi, duodenum, small intestine, india)2018-07-30v4No1 / 121
425amnoncommon homo sapiens, africa, child, duodenum, antananarivo, madagascar2018-12-08v4No1 / 123
425amnoncommon homo sapiens, africa, child, duodenum, stunted growth, central african republic, bangui2018-12-08v4No1 / 125
780amnon high in jejunum duodenum small intestine compared to caecum in jinzhou city prefecture china research facility chicken gallus gallus 2021-04-28v3No1 / 153
352amnon high in feces compared to small intestine duodenum in homo sapiens new delhi india 2018-07-30v4No1 / 190
780amnon high in caecum compared to jejunum duodenum small intestine in jinzhou city prefecture china research facility chicken gallus gallus 2021-04-28v3No1 / 212
780amnoncommon jinzhou city prefecture, china, research facility, chicken, gallus gallus, jejunum, duodenum, small intestine2021-04-28v3No1 / 232
649amnon high in jejunum duodenum compared to colon in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 295
13amnon high in caecum colon rectum feces compared to esophagus stomach duodenum ileum mouth in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 316
256amnoncommon sus scrofa, pig, duodenum, jejunum, ileum, united kingdom2017-11-26v4No1 / 380
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 387
425amnon high in feces compared to duodenum in homo sapiens africa child 2018-12-08v4No1 / 416
558amnon high in caecum compared to duodenum in bird centrocercus urophasianus greater sage-grouse united states of america state of wyoming 2019-09-20v4No1 / 488
352amnon high in small intestine duodenum compared to feces in homo sapiens new delhi india 2018-07-30v4No1 / 545
425amnon high in duodenum compared to feces in homo sapiens africa child 2018-12-08v4No1 / 622
256amnonlower in small intestine compared to colon in pigs ( high in caecum right colon left colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-26v4No1 / 740
649amnon high in colon compared to jejunum duodenum in lamb age 6 weeks research facility new zealand ovis aries sheep 2020-09-07v3No1 / 1261

Problems / suggestions? Please email info AT dbbact DOT org