Summary for ontology term: female

Number of annotations with term: 108

Annotations:

common ontology terms
term enrichment score
TermScore
female0.935561
mouse0.306859
mus musculus0.277099
c57bl/60.273632
research facility0.215738
LOWER IN male0.183181
feces0.183133
LOWER IN female0.167910
pregnancy0.165975
male0.156250
balb/c0.150171
homo sapiens0.146879
united states of america0.142643
adult0.121827
state of oregon0.114286
ovariectomy0.100000
age 38 weeks0.100000
diet0.096154
vagina0.090909
caecum0.090909
age 9 weeks0.084746
skin0.080000
rattus norvegicus0.080000
high fat diet0.076628
state of california0.069444
south korea0.068966
thailand0.068966
mus musculoides0.068966
nyulmc0.068966
nod/shiltj (no. 001976, jackson labs)0.068966
nod mouse0.068966
tongue0.066667
rat0.066667
infant0.065574
harlan sprague dawley0.052632
a/j0.052632
LOWER IN balb/c0.052632
LOWER IN a/j0.052632
low capacity running strain0.052632
low fat diet0.052632
LOWER IN control0.051813
control0.051282
age 2 months0.051282
LOWER IN c57bl/60.051282
age 4 weeks0.051282
jackson laboratories0.050000
age 1 year0.048780
mouse chow0.045455
urine0.035714
toronto0.035714
amsterdam0.035714
poland0.035714
hmong0.035714
myanmar0.035714
karen0.035714
age 6 months0.035714
nanger granti0.035714
kenya0.035714
tropical grassland biome0.035714
gazelle0.035714
bank vole0.035714
myodes glareolus0.035714
ukraine0.035714
cba/caj0.035714
skh-1 hairless mouse0.035714
dorsum0.035714
state of tennessee0.035398
province of quebec0.035088
taconic farms0.035088
colombia0.034483
oral cavity0.033333
sus scrofa0.032258
pig0.032258
rectum0.031746
LOWER IN antibiotic0.031746
canada0.031250
obsolete_juvenile stage0.031250
antibiotic0.031250
dentition0.030769
farm0.029412
city0.029412
australia0.028986
mouth0.027397
saliva0.027027
reproductive system0.018182
reproductive organ0.018182
genitalia0.018182
first trimester0.018182
LOWER IN last trimester0.018182
last trimerster0.018182
LOWER IN first trimester0.018182
premature birth0.018182
LOWER IN premature birth0.018182
LOWER IN age 2 months0.018182
LOWER IN tongue0.018182
LOWER IN harlan spague dawley0.018182
age 3 weeks0.018182
LOWER IN age 24 weeks0.018182
age 24 weeks0.018182
LOWER IN age 3 weeks0.018182
Fraction of dbbact annotations with this term covered by the query
TermScore
female0.965517
LOWER IN male0.909091
LOWER IN female0.900000
pregnancy0.800000
male0.500000
south korea0.500000
urine0.500000
toronto0.500000
amsterdam0.500000
reproductive system0.500000
reproductive organ0.500000
genitalia0.500000
poland0.500000
thailand0.500000
hmong0.500000
myanmar0.500000
karen0.500000
first trimester0.500000
LOWER IN last trimester0.500000
last trimerster0.500000
LOWER IN first trimester0.500000
premature birth0.500000
LOWER IN premature birth0.500000
age 6 months0.500000
LOWER IN age 2 months0.500000
LOWER IN tongue0.500000
nanger granti0.500000
kenya0.500000
tropical grassland biome0.500000
gazelle0.500000
harlan sprague dawley0.500000
LOWER IN harlan spague dawley0.500000
a/j0.500000
LOWER IN balb/c0.500000
LOWER IN a/j0.500000
age 3 weeks0.500000
LOWER IN age 24 weeks0.500000
age 24 weeks0.500000
LOWER IN age 3 weeks0.500000
mus musculoides0.500000
nyulmc0.500000
nod/shiltj (no. 001976, jackson labs)0.500000
pulsed antibiotic treatment, macrolide tylosin tartrate0.500000
LOWER IN pulsed antibiotic treatment, macrolide tylosin tartrate0.500000
sub-therapeutic antibiotic treatment, penicillin v potassium salt0.500000
LOWER IN sub-therapeutic antibiotic treatment, penicillin v potassium salt0.500000
bank vole0.500000
myodes glareolus0.500000
ukraine0.500000
ovariectomy0.500000
age 38 weeks0.500000
high capacity running strain0.500000
LOWER IN low capacity running strain0.500000
low capacity running strain0.500000
LOWER IN high capacity running strain0.500000
sedentary0.500000
low physical activity0.500000
LOWER IN exercise0.500000
LOWER IN high physical activity0.500000
exercise0.500000
high physical activity0.500000
LOWER IN sedentary0.500000
LOWER IN low physical activity0.500000
nod mouse0.500000
LOWER IN experimental autoimmune encephalomyelitis0.500000
experimental autoimmune encephalomyelitis0.500000
lactobacillus plantarum0.500000
LOWER IN probiotics0.500000
LOWER IN lactobacillus plantarum0.500000
LOWER IN low fat diet0.500000
low fat diet0.500000
cba/caj0.500000
skh-1 hairless mouse0.500000
dorsum0.500000
LOWER IN age 9 weeks0.500000
age 9 weeks0.500000
LOWER IN zinc deficiency0.500000
LOWER IN low zinc diet0.500000
zinc deficiency0.500000
low zinc diet0.500000
c57bl/60.416667
state of tennessee0.400000
province of quebec0.333333
age 2 months0.333333
tongue0.333333
LOWER IN jackson laboratories0.333333
LOWER IN c57bl/60.333333
probiotics0.333333
taconic farms0.333333
age 4 weeks0.333333
LOWER IN age 4 weeks0.333333
balb/c0.285714
vagina0.250000
LOWER IN age 1 year0.250000
colombia0.250000
jackson laboratories0.250000
state of oregon0.250000
mouse0.227273
high fat diet0.222222
age 1 year0.200000
Fraction of annotations for the query sequences containing the term
TermScore
female0.907407
feces0.703704
united states of america0.611111
research facility0.564815
mus musculus0.472222
mouse0.472222
homo sapiens0.370370
c57bl/60.203704
adult0.148148
LOWER IN male0.101852
balb/c0.101852
male0.092593
LOWER IN female0.092593
pregnancy0.092593
state of california0.092593
diet0.092593
caecum0.083333
infant0.074074
state of oregon0.074074
skin0.055556
vagina0.055556
LOWER IN control0.055556
control0.055556
rat0.055556
rattus norvegicus0.055556
ovariectomy0.055556
age 38 weeks0.055556
high fat diet0.046296
age 9 weeks0.046296
south korea0.037037
thailand0.037037
tongue0.037037
mus musculoides0.037037
nyulmc0.037037
nod/shiltj (no. 001976, jackson labs)0.037037
nod mouse0.037037
age 2 months0.027778
age 1 year0.027778
harlan sprague dawley0.027778
jackson laboratories0.027778
a/j0.027778
LOWER IN balb/c0.027778
LOWER IN c57bl/60.027778
LOWER IN a/j0.027778
low capacity running strain0.027778
low fat diet0.027778
mouse chow0.027778
age 4 weeks0.027778
urine0.018519
state of tennessee0.018519
toronto0.018519
sus scrofa0.018519
pig0.018519
canada0.018519
farm0.018519
province of quebec0.018519
saliva0.018519
amsterdam0.018519
poland0.018519
rectum0.018519
hmong0.018519
china0.018519
myanmar0.018519
karen0.018519
age 6 months0.018519
city0.018519
colombia0.018519
oral cavity0.018519
obsolete_juvenile stage0.018519
dentition0.018519
australia0.018519
mouth0.018519
nanger granti0.018519
kenya0.018519
tropical grassland biome0.018519
gazelle0.018519
antibiotic0.018519
LOWER IN antibiotic0.018519
bank vole0.018519
myodes glareolus0.018519
ukraine0.018519
cba/caj0.018519
taconic farms0.018519
skh-1 hairless mouse0.018519
dorsum0.018519
dog0.009259
canis lupus familiaris0.009259
reproductive system0.009259
reproductive organ0.009259
genitalia0.009259
first trimester0.009259
LOWER IN last trimester0.009259
last trimerster0.009259
LOWER IN first trimester0.009259
premature birth0.009259
LOWER IN premature birth0.009259
LOWER IN age 2 months0.009259
LOWER IN age 1 year0.009259
LOWER IN caecum0.009259
LOWER IN tongue0.009259
Exp. ID User ID Description Date Sequences
456amnonvery abundant (>90%) in tongues of one group of mice but not present in others (other mus musculus, mouse, research facility, united states of america, c57bl/6, female, tongue)2019-01-101 / 1
176amnonhigh freq. in skin of hairless mice (highfreq mouse, mus musculus, skin, female, skh-1 hairless mouse, dorsum, research facility, united states of america)2017-07-291 / 1
167amnonlower in late timepoints in mice with induced eae compared to control ( high in control compared to experimental autoimmune encephalomyelitis in mouse mus musculus nod mouse united states of america female feces research facility )2017-07-181 / 2
66amnon high in male compared to female in homo sapiens saliva adult amsterdam 2017-02-181 / 3
66amnon high in female compared to male in homo sapiens saliva amsterdam adult 2017-02-181 / 3
231amnonhigher in female compared to male in dog genitalia ( high in female compared to male in dog canis lupus familiaris united states of america reproductive system reproductive organ genitalia )2017-11-021 / 3
191amnondecreases during pregnancy ( high in first trimester compared to last trimester in homo sapiens vagina female united states of america pregnancy )2017-09-051 / 3
203amnon high in male compared to female in homo sapiens oral cavity obsolete_juvenile stage dentition australia mouth 2017-10-011 / 3
46amnonsmj: higher in female mice feces treated with antibiotics ( high in sub-therapeutic antibiotic treatment, penicillin v potassium salt antibiotic compared to control in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility female )2017-01-121 / 3
203amnon high in female compared to male in homo sapiens oral cavity obsolete_juvenile stage dentition australia mouth 2017-10-011 / 4
300amnon high in exercise high physical activity compared to sedentary low physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-271 / 5
423amnon high in female compared to male in bank vole myodes glareolus ukraine skin 2018-12-051 / 6
191amnonincreases during pregnancy ( high in last trimerster compared to first trimester in homo sapiens vagina female united states of america pregnancy )2017-09-051 / 7
217amnonhighfreq mus musculus, mouse, research facility, feces, female, c57bl/62017-10-241 / 7
220amnonlower in mice supplemented with lactobacillus plantarum probiotics ( high in control diet compared to probiotics lactobacillus plantarum in mus musculus mouse feces research facility united states of america female balb/c )2017-10-241 / 7
435amnon high in zinc deficiency low zinc diet compared to control in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon age 9 weeks 2018-12-231 / 7
435amnonhighfreq mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 4 weeks2018-12-231 / 7
435amnonhighfreq mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 9 weeks2018-12-231 / 7
284amnon high in age 2 months compared to age 1 year in homo sapiens female feces state of california infant 2018-01-271 / 8
167amnonhighfreq mus musculus, mouse, nod mouse, feces, female, research facility, united states of america2017-07-181 / 8
435amnon high in control compared to zinc deficiency low zinc diet in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon age 9 weeks 2018-12-231 / 8
456amnonhighfreq mus musculus, mouse, research facility, united states of america, c57bl/6, female, tongue2019-01-101 / 9
10amnon high in female compared to male in homo sapiens feces toronto 2016-10-271 / 10
46amnonsmj: lower in female mice feces than treated with antibiotics ( high in control compared to sub-therapeutic antibiotic treatment, penicillin v potassium salt antibiotic in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility female )2017-01-121 / 10
10amnon high in male compared to female in homo sapiens feces toronto 2016-10-271 / 11
191amnonhighfreq homo sapiens, vagina, female, united states of america, pregnancy2017-09-051 / 11
400amnonhigh freq. in hmong (chinese) females from thailand (highfreq homo sapiens, feces, adult, female, thailand, hmong, china)2018-11-181 / 13
404amnon high in male compared to female in feces homo sapiens city adult colombia 2018-11-201 / 13
220amnonhigher in mice supplemented with lactobacillus plantarum probiotics ( high in probiotics diet lactobacillus plantarum compared to control in mus musculus mouse feces research facility united states of america female balb/c )2017-10-241 / 13
7amnonhighfreq urine, female, homo sapiens, pregnancy, state of tennessee2016-10-131 / 14
400amnonhigh freq. in karen (burma) females from thailand (highfreq homo sapiens, feces, adult, female, thailand, karen, myanmar)2018-11-181 / 14
456amnon high in tongue compared to caecum in mus musculus mouse research facility united states of america c57bl/6 female 2019-01-101 / 14
458amnonhigh freq. in mice strains from jackson laboratories (highfreq mus musculus, mouse, research facility, feces, female, united states of america, jackson laboratories)2019-01-111 / 14
220amnonhighfreq mus musculus, mouse, feces, research facility, united states of america, female, balb/c, high fat diet, diet2017-10-241 / 14
470amnonhighfreq sus scrofa, pig, canada, farm, province of quebec, feces, female, adult, pregnancy2019-01-141 / 15
456amnonhighfreq mus musculus, mouse, research facility, united states of america, c57bl/6, female, caecum2019-01-101 / 15
456amnoncommon mus musculus, mouse, research facility, united states of america, c57bl/6, female, tongue2019-01-101 / 15
300amnonhighfreq rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-271 / 15
435amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 4 weeks2018-12-231 / 15
310amnonhighfreq homo sapiens, feces, female, adult, poland, rectum2018-04-071 / 16
46amnonsmj: higher in female mice feces treated with antibiotics ( high in antibiotic pulsed antibiotic treatment, macrolide tylosin tartrate compared to control in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility female )2017-01-121 / 16
400amnonhigh freq. in feces of european american females (highfreq homo sapiens, feces, united states of america, adult, female)2018-11-181 / 17
300amnon high in sedentary low physical activity compared to exercise high physical activity in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility low capacity running strain 2018-02-271 / 17
284amnonhighfreq homo sapiens, female, feces, state of california, infant, age 6 months2018-01-271 / 18
220amnonhighfreq mus musculus, mouse, feces, research facility, united states of america, female, balb/c, diet, mouse chow, low fat diet2017-10-241 / 18
284amnoncommon homo sapiens, female, feces, state of california, infant, age 2 months2018-01-271 / 20
284amnonhighfreq homo sapiens, female, feces, state of california, infant, age 2 months2018-01-271 / 20
167amnonhigher in late timepoints in mice with induced eae compared to control ( high in experimental autoimmune encephalomyelitis compared to control in mouse mus musculus nod mouse united states of america female feces research facility )2017-07-181 / 20
188amnonhighfreq mus musculus, mouse, research facility, female, cba/caj, taconic farms, feces2017-10-251 / 20
458amnonhigh freq. in mice strains from harlan sprague dawley (highfreq mus musculus, mouse, research facility, feces, female, united states of america, harlan sprague dawley)2019-01-111 / 21
191amnonhigher in preterm birth vaginal samples ( high in premature birth compared to control in homo sapiens vagina female united states of america pregnancy )2017-09-051 / 22
284amnonhighfreq homo sapiens, adult, female, feces, state of california2018-01-271 / 22
219amnonhigh freq. in mother mice feces (highfreq mus musculus, mouse, feces, c57bl/6, research facility, south korea, female)2017-10-241 / 22
63amnon high in male compared to female in homo sapiens skin 2017-02-151 / 23
284amnonhighfreq homo sapiens, female, feces, state of california, infant, age 1 year2018-01-271 / 23
435amnonlower in mice at end of experiment compared to initial sample ( high in age 4 weeks compared to age 9 weeks in feces united states of america female research facility mus musculus c57bl/6 state of oregon mouse )2018-12-231 / 23
284amnoncommon homo sapiens, female, feces, state of california, infant, age 6 months2018-01-271 / 25
284amnoncommon homo sapiens, female, feces, state of california, infant, age 1 year2018-01-271 / 30
211amnon high in female compared to male in feces united states of america research facility mus musculus mouse diet high fat diet 2017-10-221 / 30
435amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, female, united states of america, state of oregon, age 9 weeks2018-12-231 / 30
191amnoncommon homo sapiens, vagina, female, united states of america, pregnancy2017-09-051 / 31
458amnonnegatively correlated with age ( high in age 3 weeks compared to age 24 weeks age in mus musculus mouse research facility feces female united states of america )2019-01-111 / 31
131amnon high in male compared to female in homo sapiens feces south korea 2017-04-161 / 34
284amnon high in age 1 year compared to age 2 months in homo sapiens female feces state of california infant 2018-01-271 / 35
191amnonlower in preterm birth vaginal samples ( high in control compared to premature birth in homo sapiens vagina female united states of america pregnancy )2017-09-051 / 37
300amnon high in high capacity running strain compared to low capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-271 / 45
211amnon high in male compared to female in feces united states of america research facility mus musculus mouse high fat diet diet 2017-10-221 / 47
300amnon high in low capacity running strain compared to high capacity running strain in rat rattus norvegicus caecum female ovariectomy age 38 weeks united states of america research facility 2018-02-271 / 52
131amnon high in female compared to male in homo sapiens feces south korea 2017-04-161 / 55
423amnon high in male compared to female in bank vole myodes glareolus ukraine skin 2018-12-051 / 56
435amnonhigher in mice at end of experiment compared to initial sample ( high in age 9 weeks compared to age 4 weeks in mus musculus mouse feces research facility c57bl/6 female united states of america state of oregon )2018-12-231 / 73
404amnon high in female compared to male in homo sapiens feces adult colombia city 2018-11-201 / 88
46amnonsmj: lower in control female mice than treated with antiobiotics ( high in control compared to antibiotic pulsed antibiotic treatment, macrolide tylosin tartrate in feces mus musculoides united states of america nyulmc nod/shiltj (no. 001976, jackson labs) research facility female )2017-01-121 / 94
400amnoncommon in feces of european american females (common homo sapiens, feces, united states of america, adult, female)2018-11-181 / 95
400amnoncommon in hmong (chinese) females from thailand (common homo sapiens, feces, adult, female, thailand, hmong, china)2018-11-181 / 95
458amnonpositively correlated with age ( high in age 24 weeks age compared to age 3 weeks in mus musculus mouse research facility feces female united states of america )2019-01-111 / 99
284amnoncommon homo sapiens, adult, female, feces, state of california2018-01-271 / 105
217amnoncommon mus musculus, mouse, research facility, feces, female, c57bl/62017-10-241 / 113
220amnon high in diet low fat diet mouse chow compared to high fat diet in mus musculus mouse feces research facility united states of america female balb/c 2017-10-241 / 113
458amnoncommon in mice strains from jackson laboratories (common mus musculus, mouse, research facility, feces, female, united states of america, jackson laboratories)2019-01-111 / 129
400amnoncommon in karen (burma) females from thailand (common feces, homo sapiens, female, adult, myanmar, thailand, karen)2018-11-181 / 132
176amnoncommon in skin of hairless mice (common mouse, mus musculus, skin, female, skh-1 hairless mouse, dorsum, research facility, united states of america)2017-07-291 / 133
63amnon high in female compared to male in homo sapiens skin 2017-02-151 / 139
458amnonhigher in BALB/c strain compared to A/J and C57BL/6 strains ( high in balb/c compared to a/j c57bl/6 in mus musculus mouse research facility feces female united states of america )2019-01-111 / 147
300amnoncommon rat, rattus norvegicus, caecum, female, ovariectomy, age 38 weeks, united states of america, research facility2018-02-271 / 150
220amnon high in diet high fat diet compared to mouse chow low fat diet in mus musculus mouse feces research facility united states of america female balb/c 2017-10-241 / 154
456amnoncommon mus musculus, mouse, research facility, united states of america, c57bl/6, female, caecum2019-01-101 / 167
458amnoncommon in mice strains from harlan sprague dawley (common mus musculus, mouse, research facility, feces, female, united states of america, harlan sprague dawley)2019-01-111 / 184
188amnoncommon mus musculus, mouse, research facility, female, cba/caj, taconic farms, feces2017-10-251 / 185
6amnoncommon urine, female, homo sapiens, pregnancy, state of tennessee2016-10-131 / 201
458amnonlower in BALB/c strain compared to A/J and C57BL/6 strains ( high in a/j c57bl/6 compared to balb/c in mus musculus mouse research facility feces female united states of america )2019-01-111 / 224
310amnoncommon homo sapiens, feces, female, adult, poland, rectum2018-04-071 / 227
458amnonlower in C57BL/6 strain compared to A/J and BALB/c strains ( high in a/j balb/c compared to c57bl/6 in mus musculus mouse research facility feces female united states of america )2019-01-111 / 237
220amnoncommon feces, united states of america, female, research facility, mus musculus, balb/c, high fat diet, mouse, diet2017-10-241 / 241
219amnoncommon in mother mice feces (common mus musculus, mouse, feces, c57bl/6, research facility, south korea, female)2017-10-241 / 250
167amnoncommon feces, female, research facility, mus musculus, nod mouse, mouse, united states of america2017-07-181 / 260
63amnon high in male compared to female in homo sapiens feces united states of america 2017-12-041 / 262
220amnoncommon mus musculus, mouse, feces, research facility, united states of america, female, balb/c, diet, mouse chow, low fat diet2017-10-241 / 262
458amnonlower in mice from hsd compared to jackson laboratories ( high in jackson laboratories compared to harlan spague dawley in mus musculus mouse research facility feces female united states of america )2019-01-111 / 267
78amnon high in male compared to female in nanger granti kenya feces tropical grassland biome gazelle 2017-03-011 / 304
458amnonhigh in A/J strain compared to BALB/c and C57BL/6 strains ( high in a/j compared to balb/c c57bl/6 in mus musculus mouse research facility feces female united states of america )2019-01-111 / 306
456amnon high in caecum compared to tongue in mus musculus mouse research facility united states of america c57bl/6 female 2019-01-101 / 338
458amnonlower in A/J strain compared to BALB/c and C57BL/6 strains ( high in balb/c c57bl/6 compared to a/j in mus musculus mouse research facility feces female united states of america )2019-01-111 / 379
458amnonhigher in C57BL/6 strain compared to A/J and BALB/c strains ( high in c57bl/6 compared to a/j balb/c in mus musculus mouse research facility feces female united states of america )2019-01-111 / 380
63amnon high in female compared to male in homo sapiens feces united states of america 2017-12-041 / 384
470amnoncommon sus scrofa, pig, canada, farm, province of quebec, feces, female, adult, pregnancy2019-01-141 / 457
458amnonhigher in mice from hsd compared to jackson laboratories ( high in harlan sprague dawley compared to jackson laboratories in mus musculus mouse research facility feces female united states of america )2019-01-111 / 644
78amnon high in female compared to male in nanger granti kenya feces tropical grassland biome gazelle 2017-03-011 / 814

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