Summary for ontology term: gastrointestinal system

Number of annotations with term: 17

Annotations:

common ontology terms
term enrichment score
TermScore
gastrointestinal system0.857143
san diego0.413793
chub mackerel0.413793
scomber japonicus0.413793
LOWER IN caecum0.380952
alimentary part of gastrointestinal system0.320000
fish0.219178
LOWER IN colon0.210526
LOWER IN alimentary part of gastrointestinal system0.190476
LOWER IN gastrointestinal system0.190476
olsztyn0.190476
poland0.190476
gut0.190476
esox lucius0.190476
pike fry0.190476
transverse colon0.190476
right colon0.187500
caecum0.181818
LOWER IN feces0.171429
aquarium0.160000
LOWER IN stomach0.160000
LOWER IN left colon0.160000
LOWER IN duodenum0.153846
duodenum0.148148
ileum0.142857
LOWER IN ileum0.142857
stomach0.129032
united kingdom0.114286
LOWER IN digesta0.105263
esophagus0.105263
colon0.105263
LOWER IN esophagus0.105263
LOWER IN transverse colon0.105263
LOWER IN sucram0.105263
standard feed0.105263
sucram0.105263
LOWER IN standard feed0.105263
sus scrofa0.102564
pig0.102564
LOWER IN gill0.100000
pacific ocean0.096000
gill0.095238
digesta0.095238
jejunum0.095238
left colon0.095238
LOWER IN jejunum0.095238
LOWER IN right colon0.090909
LOWER IN rectum0.083333
LOWER IN mouth0.083333
rectum0.074074
mus musculus0.062640
diet0.061538
mouth0.051282
feces0.023099
united states of america0.018531
research facility0.016327
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN caecum1.000000
LOWER IN colon1.000000
gastrointestinal system0.833333
alimentary part of gastrointestinal system0.500000
san diego0.500000
chub mackerel0.500000
scomber japonicus0.500000
LOWER IN alimentary part of gastrointestinal system0.500000
LOWER IN gastrointestinal system0.500000
LOWER IN digesta0.500000
olsztyn0.500000
poland0.500000
gut0.500000
esox lucius0.500000
pike fry0.500000
esophagus0.500000
colon0.500000
LOWER IN esophagus0.500000
LOWER IN transverse colon0.500000
transverse colon0.500000
LOWER IN sucram0.500000
standard feed0.500000
sucram0.500000
LOWER IN standard feed0.500000
caecum0.400000
LOWER IN gill0.333333
gill0.250000
digesta0.250000
aquarium0.250000
LOWER IN stomach0.250000
jejunum0.250000
LOWER IN left colon0.250000
left colon0.250000
LOWER IN jejunum0.250000
LOWER IN duodenum0.222222
duodenum0.200000
LOWER IN right colon0.200000
right colon0.200000
ileum0.181818
LOWER IN ileum0.181818
LOWER IN feces0.166667
fish0.142857
stomach0.142857
LOWER IN rectum0.142857
LOWER IN mouth0.142857
united kingdom0.111111
rectum0.100000
sus scrofa0.090909
pig0.090909
pacific ocean0.055556
mouth0.045455
diet0.041667
mus musculus0.033898
feces0.012146
united states of america0.009479
research facility0.008772
Fraction of annotations for the query sequences containing the term
TermScore
gastrointestinal system0.882353
fish0.470588
mus musculus0.411765
united states of america0.411765
san diego0.352941
pacific ocean0.352941
chub mackerel0.352941
scomber japonicus0.352941
alimentary part of gastrointestinal system0.235294
feces0.235294
LOWER IN caecum0.235294
LOWER IN feces0.176471
right colon0.176471
LOWER IN alimentary part of gastrointestinal system0.117647
LOWER IN gastrointestinal system0.117647
olsztyn0.117647
poland0.117647
aquarium0.117647
research facility0.117647
gut0.117647
esox lucius0.117647
pike fry0.117647
stomach0.117647
duodenum0.117647
ileum0.117647
LOWER IN colon0.117647
caecum0.117647
LOWER IN stomach0.117647
LOWER IN duodenum0.117647
LOWER IN ileum0.117647
LOWER IN left colon0.117647
transverse colon0.117647
diet0.117647
sus scrofa0.117647
pig0.117647
united kingdom0.117647
gill0.058824
LOWER IN gill0.058824
LOWER IN digesta0.058824
digesta0.058824
esophagus0.058824
LOWER IN rectum0.058824
mouth0.058824
colon0.058824
rectum0.058824
LOWER IN esophagus0.058824
LOWER IN mouth0.058824
jejunum0.058824
LOWER IN right colon0.058824
LOWER IN transverse colon0.058824
left colon0.058824
LOWER IN jejunum0.058824
LOWER IN sucram0.058824
standard feed0.058824
sucram0.058824
LOWER IN standard feed0.058824
Exp. ID User ID Description Date Region Flag Sequences
14amnonhighest in the right colon ( high in right colon compared to caecum in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 0
14amnonhighest in feces compared to colon ( high in feces compared to colon in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 0
14amnonmuch higher in right and transverse colon compared to other GI tract ( high in right colon transverse colon compared to left colon caecum in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 0
642amnoncommon gastrointestinal system, alimentary part of gastrointestinal system, san diego, pacific ocean, chub mackerel, scomber japonicus, fish2020-08-28v4No1 / 6
642amnondominant gastrointestinal system, alimentary part of gastrointestinal system, san diego, pacific ocean, chub mackerel, scomber japonicus, fish2020-08-28v4No1 / 11
613amnondominant olsztyn, poland, aquarium, research facility, gastrointestinal system, gut, esox lucius, pike fry, fish2020-04-25v3No1 / 14
642amnon high in gastrointestinal system alimentary part of gastrointestinal system compared to feces digesta in fish chub mackerel scomber japonicus san diego pacific ocean 2020-08-28v4No1 / 20
13amnon high in esophagus stomach duodenum ileum mouth compared to caecum colon rectum feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 24
14amnon high in stomach duodenum jejunum ileum compared to caecum right colon transverse colon left colon feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 41
14amnon high in caecum right colon transverse colon left colon feces compared to stomach duodenum jejunum ileum in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 50
256amnonhigher in control diet compared to diet enriched with sucram in pig gut ( high in diet standard feed compared to sucram in gastrointestinal system sus scrofa pig united kingdom )2017-11-26v4No1 / 108
642amnon high in gastrointestinal system alimentary part of gastrointestinal system compared to gill in fish chub mackerel scomber japonicus san diego pacific ocean 2020-08-28v4No1 / 110
613amnoncommon olsztyn, poland, aquarium, research facility, gastrointestinal system, gut, esox lucius, pike fry, fish2020-04-25v3No1 / 115
256amnonlower in control diet compared to diet enriched with sucram in pig gut ( high in diet sucram compared to standard feed in sus scrofa pig gastrointestinal system united kingdom )2017-11-26v4No1 / 226
13amnon high in caecum colon rectum feces compared to esophagus stomach duodenum ileum mouth in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 315
642amnon high in gill compared to alimentary part of gastrointestinal system gastrointestinal system in fish chub mackerel scomber japonicus san diego pacific ocean 2020-08-28v4No1 / 433
642amnon high in feces digesta compared to gastrointestinal system alimentary part of gastrointestinal system in fish chub mackerel scomber japonicus san diego pacific ocean 2020-08-28v4No1 / 627

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