Summary for ontology term: germany

Number of annotations with term: 75

Annotations:

common ontology terms
term enrichment score
TermScore
germany0.927498
salamandra salamandra0.307692
fire salamander0.257426
amphibian larval stage0.228070
janvier labs0.210526
LOWER IN other plants0.175824
other plants0.175824
age 18 weeks0.157303
high sugar diet0.137931
rhizosphere0.127341
skin0.115108
c57bl/6j0.114286
stream0.111111
larval stage0.106557
pond0.102564
LOWER IN stream0.096386
mucus0.080808
intestine0.078947
red fescue grass0.074074
festuca rubra0.074074
galium mollugo0.074074
hedge bedstraw0.074074
geranium pratense0.074074
meadow geranium0.074074
latyrus pratensis0.074074
meadow pea-vine0.074074
onobrychis viciifolia0.074074
common sainfoin0.074074
plantago lanceolata0.074074
ribwort plantain0.074074
prunella vulgaris0.074074
woundwort0.074074
veronica chamaedrys0.074074
germander speedwell0.074074
age 6 weeks0.071429
subgingival plaque0.069565
LOWER IN pond0.068966
mouse0.065041
dentition0.059259
mus musculus0.058394
mouse chow0.057143
mouth0.051613
LOWER IN end0.051282
end0.051282
bermuda0.050633
coffea arabica0.050633
fvb/n mice0.050633
bufo bufo0.050633
common toad0.050633
hordeum vulgare0.050633
winter barley0.050633
LOWER IN high sugar diet0.050633
salamander0.049383
toad0.049383
female0.049383
ecuador0.048193
pair of nares0.043011
nasal cavity0.043011
dog0.042105
canis lupus familiaris0.038835
research facility0.036530
adult0.034934
sea water0.030075
feces0.027641
LOWER IN festuca rubra0.025974
LOWER IN red fescue grass0.025974
LOWER IN hedge bedstraw0.025974
LOWER IN galium mollugo0.025974
LOWER IN meadow geranium0.025974
LOWER IN geranium pratense0.025974
beginning0.025974
LOWER IN beginning0.025974
LOWER IN meadow pea-vine0.025974
LOWER IN lathyrus pratensis0.025974
LOWER IN common sainfoin0.025974
LOWER IN onobrychis viciifolia0.025974
LOWER IN ribwort plantain0.025974
LOWER IN plantago lanceolata0.025974
LOWER IN woundwort0.025974
LOWER IN prunella vulgaris0.025974
LOWER IN germander speedwell0.025974
LOWER IN veronica chamaedrys0.025974
start0.025974
LOWER IN start0.025974
LOWER IN age 18 weeks0.025974
LOWER IN age 6 weeks0.025974
very high sugar diet0.025974
LOWER IN very high sugar diet0.025974
LOWER IN no fructose diet0.025974
no fructose diet0.025974
western diet0.025641
LOWER IN western diet0.025641
fructose diet0.025641
fructose0.025641
LOWER IN fructose diet0.025641
LOWER IN fructose0.025641
LOWER IN periodontitis0.023810
periodontitis0.023810
LOWER IN high fat diet0.023529
high fat diet0.023256
Fraction of dbbact annotations with this term covered by the query
TermScore
germany0.909091
LOWER IN end0.666667
end0.666667
salamandra salamandra0.666667
red fescue grass0.500000
festuca rubra0.500000
LOWER IN other plants0.500000
other plants0.500000
LOWER IN festuca rubra0.500000
LOWER IN red fescue grass0.500000
galium mollugo0.500000
hedge bedstraw0.500000
LOWER IN hedge bedstraw0.500000
LOWER IN galium mollugo0.500000
geranium pratense0.500000
meadow geranium0.500000
LOWER IN meadow geranium0.500000
LOWER IN geranium pratense0.500000
bermuda0.500000
beginning0.500000
LOWER IN beginning0.500000
latyrus pratensis0.500000
meadow pea-vine0.500000
LOWER IN meadow pea-vine0.500000
LOWER IN lathyrus pratensis0.500000
onobrychis viciifolia0.500000
common sainfoin0.500000
LOWER IN common sainfoin0.500000
LOWER IN onobrychis viciifolia0.500000
plantago lanceolata0.500000
ribwort plantain0.500000
LOWER IN ribwort plantain0.500000
LOWER IN plantago lanceolata0.500000
prunella vulgaris0.500000
woundwort0.500000
LOWER IN woundwort0.500000
LOWER IN prunella vulgaris0.500000
veronica chamaedrys0.500000
germander speedwell0.500000
LOWER IN germander speedwell0.500000
LOWER IN veronica chamaedrys0.500000
coffea arabica0.500000
start0.500000
LOWER IN start0.500000
fire salamander0.500000
LOWER IN stream0.500000
fvb/n mice0.500000
bufo bufo0.500000
common toad0.500000
hordeum vulgare0.500000
winter barley0.500000
janvier labs0.500000
LOWER IN high sugar diet0.500000
LOWER IN age 18 weeks0.500000
high sugar diet0.500000
age 18 weeks0.500000
LOWER IN age 6 weeks0.500000
very high sugar diet0.500000
LOWER IN very high sugar diet0.500000
LOWER IN no fructose diet0.500000
no fructose diet0.500000
amphibian larval stage0.333333
stream0.333333
salamander0.333333
toad0.333333
age 6 weeks0.333333
western diet0.333333
LOWER IN western diet0.333333
fructose diet0.333333
fructose0.333333
LOWER IN fructose diet0.333333
LOWER IN fructose0.333333
ecuador0.250000
LOWER IN pond0.250000
mucus0.166667
pond0.142857
skin0.125000
LOWER IN periodontitis0.111111
periodontitis0.111111
pair of nares0.111111
nasal cavity0.111111
subgingival plaque0.100000
dog0.100000
c57bl/6j0.100000
mouse chow0.100000
LOWER IN high fat diet0.100000
high fat diet0.090909
LOWER IN mouse chow0.083333
larval stage0.076923
rhizosphere0.074074
canis lupus familiaris0.071429
dentition0.066667
intestine0.058824
mouth0.050000
mouse0.040816
mus musculus0.035714
sea water0.034483
female0.030303
adult0.025974
research facility0.020619
Fraction of annotations for the query sequences containing the term
TermScore
germany0.946667
rhizosphere0.453333
salamandra salamandra0.200000
feces0.186667
fire salamander0.173333
larval stage0.173333
amphibian larval stage0.173333
mouse0.160000
mus musculus0.160000
research facility0.160000
female0.133333
c57bl/6j0.133333
janvier labs0.133333
intestine0.120000
LOWER IN other plants0.106667
other plants0.106667
skin0.106667
age 18 weeks0.093333
homo sapiens0.080000
pond0.080000
high sugar diet0.080000
stream0.066667
dentition0.053333
subgingival plaque0.053333
mouth0.053333
LOWER IN stream0.053333
mucus0.053333
adult0.053333
red fescue grass0.040000
festuca rubra0.040000
galium mollugo0.040000
hedge bedstraw0.040000
geranium pratense0.040000
meadow geranium0.040000
latyrus pratensis0.040000
meadow pea-vine0.040000
onobrychis viciifolia0.040000
common sainfoin0.040000
plantago lanceolata0.040000
ribwort plantain0.040000
prunella vulgaris0.040000
woundwort0.040000
veronica chamaedrys0.040000
germander speedwell0.040000
LOWER IN pond0.040000
mouse chow0.040000
age 6 weeks0.040000
bermuda0.026667
LOWER IN end0.026667
sea water0.026667
end0.026667
coffea arabica0.026667
ecuador0.026667
salamander0.026667
canis lupus familiaris0.026667
dog0.026667
pair of nares0.026667
nasal cavity0.026667
fvb/n mice0.026667
bufo bufo0.026667
toad0.026667
common toad0.026667
hordeum vulgare0.026667
winter barley0.026667
LOWER IN high sugar diet0.026667
LOWER IN festuca rubra0.013333
LOWER IN red fescue grass0.013333
LOWER IN hedge bedstraw0.013333
LOWER IN galium mollugo0.013333
LOWER IN meadow geranium0.013333
LOWER IN geranium pratense0.013333
beginning0.013333
LOWER IN beginning0.013333
LOWER IN meadow pea-vine0.013333
LOWER IN lathyrus pratensis0.013333
LOWER IN common sainfoin0.013333
LOWER IN onobrychis viciifolia0.013333
LOWER IN ribwort plantain0.013333
LOWER IN plantago lanceolata0.013333
LOWER IN woundwort0.013333
LOWER IN prunella vulgaris0.013333
LOWER IN germander speedwell0.013333
LOWER IN veronica chamaedrys0.013333
start0.013333
LOWER IN start0.013333
control0.013333
LOWER IN periodontitis0.013333
LOWER IN control0.013333
periodontitis0.013333
LOWER IN age 18 weeks0.013333
LOWER IN age 6 weeks0.013333
LOWER IN mouse chow0.013333
high fat diet0.013333
very high sugar diet0.013333
western diet0.013333
LOWER IN western diet0.013333
LOWER IN very high sugar diet0.013333
LOWER IN high fat diet0.013333
fructose diet0.013333
LOWER IN no fructose diet0.013333
Exp. ID User ID Description Date Region Flag Sequences
67amnonincreases during fermentation of coffee beans ( high in end compared to start in coffea arabica ecuador )2017-02-19v4No1 / 3
149amnonhigher in larvae transferred to stream compared to pond ( high in stream compared to pond in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine )2017-04-24v4No1 / 3
309amnonhighfreq rhizosphere, germany, veronica chamaedrys, germander speedwell2018-04-05v4No1 / 5
67amnondisappears during fermentation of coffee beans ( high in start compared to end in coffea arabica ecuador )2017-02-19v4No1 / 6
149amnonhigher in larvae transferred to pond compared to stream ( high in pond compared to stream in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine )2017-04-24v4No1 / 7
309amnonhighfreq rhizosphere, germany, festuca rubra, red fescue grass2018-04-05v4No1 / 8
309amnonhighfreq rhizosphere, germany, galium mollugo, hedge bedstraw2018-04-05v4No1 / 9
309amnonhighfreq rhizosphere, germany, geranium pratense, meadow geranium2018-04-05v4No1 / 10
309amnonhighfreq rhizosphere, germany, plantago lanceolata, ribwort plantain2018-04-05v4No1 / 10
309amnonhighfreq rhizosphere, germany, latyrus pratensis, meadow pea-vine2018-04-05v4No1 / 11
309amnonhighfreq rhizosphere, germany, prunella vulgaris, woundwort2018-04-05v4No1 / 11
522amnonlower in fructose supplemented diets ( high in no fructose diet compared to fructose diet fructose in mouse mus musculus feces germany research facility female c57bl/6j janvier labs age 18 weeks high sugar diet )2019-07-03v3No1 / 11
309amnonhighfreq rhizosphere, germany, onobrychis viciifolia, common sainfoin2018-04-05v4No1 / 13
149amnonhighfreq salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, intestine, stream2017-04-24v4No1 / 13
492amnonhighfreq skin, adult, germany, bufo bufo, toad, common toad2019-02-27v4No1 / 13
522amnonhigher in fructose supplemented diets ( high in fructose diet fructose compared to no fructose diet in mouse mus musculus feces germany research facility female c57bl/6j janvier labs age 18 weeks high sugar diet )2019-07-03v3No1 / 13
106amnon high in control compared to periodontitis in homo sapiens dentition germany subgingival plaque mouth 2017-04-05v4No1 / 14
291amnonhighfreq canis lupus familiaris, dog, pair of nares, nasal cavity, germany2018-02-01v4No1 / 15
126amnonhighfreq rhizosphere, germany, hordeum vulgare, winter barley2017-04-14v4No1 / 15
106amnonhighfreq homo sapiens, dentition, germany, subgingival plaque, mouth2017-04-05v4No1 / 16
149amnonhighfreq salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, skin, mucus2017-04-24v4No1 / 18
522amnonhighfreq mouse, mus musculus, feces, germany, research facility, female, c57bl/6j, janvier labs, age 6 weeks, mouse chow2019-07-03v3No1 / 19
106amnon high in periodontitis compared to control in homo sapiens dentition germany subgingival plaque mouth 2017-04-05v4No1 / 21
149amnonhighfreq salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, intestine, pond2017-04-24v4No1 / 21
377amnonhighfreq salamandra salamandra, salamander, skin, germany2018-09-12v4No1 / 21
522amnonhighfreq mouse, mus musculus, feces, germany, research facility, female, c57bl/6j, janvier labs, age 18 weeks, high sugar diet2019-07-03v3No1 / 21
248amnonhighfreq mouse, mus musculus, research facility, fvb/n mice, germany, feces2017-11-22v4No1 / 22
303amnonhighfreq homo sapiens, feces, germany, adult2018-03-12v4No1 / 23
522amnonhigher in western diet compared to control high sugar diet ( high in high fat diet very high sugar diet western diet compared to high sugar diet in mouse mus musculus feces germany research facility female c57bl/6j janvier labs age 18 weeks )2019-07-03v3No1 / 28
149amnoncommon salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, intestine, pond2017-04-24v4No1 / 31
149amnonhigher in larvae ever in a pond (original or transferred) compared to only stream ( high in pond compared to stream in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine )2017-04-24v4No1 / 45
149amnoncommon salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, skin, mucus2017-04-24v4No1 / 49
149amnoncommon salamandra salamandra, fire salamander, germany, larval stage, amphibian larval stage, intestine, stream2017-04-24v4No1 / 60
522amnonlower in western diet compared to control high sugar diet ( high in high sugar diet compared to western diet very high sugar diet high fat diet in mouse mus musculus feces germany research facility female c57bl/6j janvier labs age 18 weeks )2019-07-03v3No1 / 60
9amnonhigher in beginning of experiment comapred to 12 days ( high in beginning compared to end in bermuda sea water )2016-10-27v4No1 / 71
522amnon high in high sugar diet age 18 weeks compared to age 6 weeks mouse chow in mouse mus musculus feces germany research facility female c57bl/6j janvier labs 2019-07-03v3No1 / 81
303amnoncommon homo sapiens, feces, germany, adult2018-03-12v4No1 / 93
149amnon high in pond compared to stream in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine 2017-04-24v4No1 / 103
377amnoncommon salamandra salamandra, salamander, skin, germany2018-09-12v4No1 / 106
149amnon high in stream compared to pond in salamandra salamandra fire salamander germany larval stage amphibian larval stage intestine 2017-04-24v4No1 / 107
309amnon high in other plants compared to hedge bedstraw galium mollugo in rhizosphere germany 2018-04-05v4No1 / 110
492amnoncommon skin, adult, germany, bufo bufo, toad, common toad2019-02-27v4No1 / 115
149amnonhigher in larvae transferred to stream compared to pond ( high in stream compared to pond in salamandra salamandra fire salamander germany larval stage amphibian larval stage skin mucus )2017-04-24v4No1 / 117
522amnoncommon mouse, mus musculus, feces, germany, research facility, female, c57bl/6j, janvier labs, age 18 weeks, high sugar diet2019-07-03v3No1 / 126
522amnoncommon mouse, mus musculus, feces, germany, research facility, female, c57bl/6j, janvier labs, age 6 weeks, mouse chow2019-07-03v3No1 / 130
149amnonhigher in larvae transferred to pond compared to stream ( high in pond compared to stream in salamandra salamandra fire salamander germany larval stage amphibian larval stage skin mucus )2017-04-24v4No1 / 132
291amnoncommon canis lupus familiaris, dog, pair of nares, nasal cavity, germany2018-02-01v4No1 / 144
9amnonhigher at end of experiment (grows at later times) ( high in end compared to beginning in bermuda sea water )2016-10-27v4No1 / 158
106amnoncommon homo sapiens, dentition, germany, subgingival plaque, mouth2017-04-05v4No1 / 167
248amnoncommon mouse, mus musculus, research facility, fvb/n mice, germany, feces2017-11-22v4No1 / 203
309amnon high in other plants compared to meadow geranium geranium pratense in rhizosphere germany 2018-04-05v4No1 / 267
309amnon high in other plants compared to meadow pea-vine lathyrus pratensis in rhizosphere germany 2018-04-05v4No1 / 316
522amnon high in mouse chow age 6 weeks compared to high sugar diet age 18 weeks in mouse mus musculus feces germany research facility female c57bl/6j janvier labs 2019-07-03v3No1 / 325
309amnon high in other plants compared to ribwort plantain plantago lanceolata in rhizosphere germany 2018-04-05v4No1 / 352
309amnon high in other plants compared to common sainfoin onobrychis viciifolia in rhizosphere germany 2018-04-05v4No1 / 355
309amnon high in other plants compared to festuca rubra red fescue grass in rhizosphere germany 2018-04-05v4No1 / 383
309amnon high in other plants compared to germander speedwell veronica chamaedrys in rhizosphere germany 2018-04-05v4No1 / 404
309amnon high in onobrychis viciifolia common sainfoin compared to other plants in rhizosphere germany 2018-04-05v4No1 / 420
309amnon high in other plants compared to woundwort prunella vulgaris in rhizosphere germany 2018-04-05v4No1 / 550
309amnon high in prunella vulgaris woundwort compared to other plants in rhizosphere germany 2018-04-05v4No1 / 617
309amnon high in galium mollugo hedge bedstraw compared to other plants in rhizosphere germany 2018-04-05v4No1 / 618
309amnon high in latyrus pratensis meadow pea-vine compared to other plants in rhizosphere germany 2018-04-05v4No1 / 680
309amnon high in geranium pratense meadow geranium compared to other plants in rhizosphere germany 2018-04-05v4No1 / 688
309amnon high in red fescue grass festuca rubra compared to other plants in rhizosphere germany 2018-04-05v4No1 / 781
309amnon high in plantago lanceolata ribwort plantain compared to other plants in rhizosphere germany 2018-04-05v4No1 / 800
126amnoncommon rhizosphere, germany, hordeum vulgare, winter barley2017-04-14v4No1 / 925
309amnoncommon rhizosphere, germany, prunella vulgaris, woundwort2018-04-05v4No1 / 1217
309amnon high in veronica chamaedrys germander speedwell compared to other plants in rhizosphere germany 2018-04-05v4No1 / 1272
309amnoncommon rhizosphere, germany, latyrus pratensis, meadow pea-vine2018-04-05v4No1 / 1296
309amnoncommon rhizosphere, germany, onobrychis viciifolia, common sainfoin2018-04-05v4No1 / 1323
309amnoncommon rhizosphere, germany, plantago lanceolata, ribwort plantain2018-04-05v4No1 / 1386
309amnoncommon rhizosphere, germany, geranium pratense, meadow geranium2018-04-05v4No1 / 1434
309amnoncommon rhizosphere, germany, festuca rubra, red fescue grass2018-04-05v4No1 / 1510
309amnoncommon rhizosphere, germany, galium mollugo, hedge bedstraw2018-04-05v4No1 / 1599
309amnoncommon rhizosphere, germany, veronica chamaedrys, germander speedwell2018-04-05v4No1 / 1788

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