Summary for ontology term: ice

Number of annotations with term: 51

Top positive-associated sequence

Taxonomy Sequence Recall

Top negative-associated sequence

Taxonomy Sequence Recall

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__ChloroplastTGAGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATGCCGCGTGGAGGATGACAGCCTGTGGGTCGTAAACTCCTTTTCTCAGAGAAGAAGTTCTGACGGTATCTGAGGAATAAGCATCGGCTAACTCCGTGCCAGCAGCCGCGG0.169492
d__Bacteria;p__Cyanobacteria/Chloroplast;c__CyanobacteriaTGGGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCAATACCGCGTGAGGGACGACGGCTTTTGGGTTGTAAACCTCTTTTCCCTGGGAAGAAGATCTGACGGTACCAGGGGAATCAGCATCGGCTAACTTCGTGCCAGCAGCCGCGG0.169492
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__ChloroplastTGAGGAATTTTCTGCAATGGGCGAAAGCCTGACAGAGCAATACCGCGTGAGGGATGAAGGCCTACGGGTTGTAAACCTCTTTTCTCAAGGAGGAAGATCTGACGTTACTTGAGGAATAAGCATCGGCTAACCCTGTGCCAGCAGCCGCGG0.166667
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhodospirillales;f__Acetobacteraceae;g__RoseomonasTGGGGAATATTGGACAATGGGCGCAAGCCTGATCCAGCAATGCCGCGTGGATGAAGAAGGTCTTCGGATTGTAAAGTCCTTTCGGCGGGGACGATGATGACGGTACCCGCAGAAGAAGCCCCGGCTAACTTCGTGCCAGCAGCCGCGGTA0.140845
d__Bacteria;p__"Bacteroidetes";c__Cytophagia;o__CytophagalesTAGGGAATATTGGGCAATGGAGGAGACTCTGACCCAGCCATGCCGCGTGCCGGATGAAGGCCTTCTGGGTCGTAAACGGCTTTTTTCCGGGAAGAACCGGTTCTGTGCGCAGGGCTTTGACGGTACCGGGAGAATAAGCACCGGCTAACT0.137931
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Actinomycetales;f__MicrobacteriaceaeTGGGGAATATTGCACAATGGGCGCAAGCCTGATGCAGCAACGCCGCGTGAGGGACGACGGCCTTCGGGTTGTAAACCTCTTTTAGTAGGGAAGAAGCGTAAAAGTGACGGTACCTGCAGAAAAAGCACCGGCTAACTACGTGCCAGCAGC0.137931
d__Bacteria;p__candidate division WPS-2;g__WPS-2_genera_incertae_sedisTGAGGAATTTTCCGCAATGGGCGAAAGCCTGACGGAGCGACGCCGCGTGTGGGAAGAAGGCCTTCGGGTCGTAAACCACTGTCGAAGGGGACTATAATGAATGTACCCTTGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTA0.137931
d__Bacteria;p__Cyanobacteria/Chloroplast;c__CyanobacteriaTGGGGAATTTTCCGCAATGGGCGCAAGCCTGACGGAGCAATACCGCGTGAGGGAGGAAGGCTCTTGGGTCGTAAACCTCTTTTATCAGGGAAGAACACAATGACGGTACCTGATGAATCAGCATCGGCTAACTCTGTGCCAGCAGCCGCG0.137931
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae 1;g__Clostridium sensu strictoTGGGGAATATTGCGCAATGGGGGAAACCCTGACGCAGCAACGCCGCGTGAGTGATGAAGGTCTTCGGATTGTAAAGCTCTGTCTTTTGGGACGATAATGACGGTACCAAAGGAGGAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTA0.137931
d__Bacteria;p__"Bacteroidetes";c__Sphingobacteriia;o__"Sphingobacteriales";f__Chitinophagaceae;g__FerruginibacterTAAGGAATATTGGTCAATGGACGCAAGTCTGAACCAGCCATGCCGCGTGCAGGATGACGGCCCTCTGGGTTGTAAACTGCTTTTATAGGGGACGAAAAAAGGGCTTTCTAGCTCGTCTGACGGTACCCTAGGAATAAGCACCGGCTAACT0.137931

Annotations:

common ontology terms
term enrichment score
TermScore
rock0.426966
depth 0-20cm0.408163
difenoconazole0.320000
fungicide0.320000
tobacco field0.320000
limestone0.320000
glacier0.244898
quarry0.238806
hydrothermal vent0.190476
greece0.190476
marine hydrothermal vent0.190476
volcanic rock0.190476
volcanic crater0.190476
calvert island0.190476
ice0.171429
province of british columbia0.160000
mediterranean sea0.137931
filtered 0.2um0.137931
duluth complex0.135593
greenschist0.135593
without plants0.135593
tobacco plant present0.135593
sulfide0.126984
state of minnesota0.122137
ph 70.112676
biochar0.109890
active vent0.105263
inactive vent0.105263
epilithic0.105263
low tide zone0.105263
high tide zone0.105263
depth 20-100cm0.105263
subsurface0.105263
biofilm0.103226
surface0.090909
ph 7-80.086022
sweden0.085890
ocean0.081633
river0.080808
marine sediment0.078431
ph 4-50.077670
depth 2.5cm0.072727
LOWER IN depth 2.5cm0.072727
sandstone0.072727
grand staircase-escalante national park0.072727
depth (soil) 0-1cm0.072727
glacial ice0.072727
south shetland glacier0.072727
shetland islands0.072727
minas gerais state0.072727
campos rupestres0.072727
pm100.072727
respirable suspended particulate matter0.072727
LOWER IN depth0.070175
depth0.070175
LOWER IN depth (soil) 15cm0.067797
depth (soil) 15cm0.067797
state of utah0.067797
municipality of beijing0.067797
desert0.059701
kingdom of spain0.059259
pacific ocean0.057971
canada0.051948
air0.051948
sea water0.044944
brazil0.044944
city0.042105
LOWER IN active vent0.037736
LOWER IN inactive vent0.037736
epipsammic0.037736
LOWER IN epilithic0.037736
LOWER IN epipsammic0.037736
LOWER IN high tide zone0.037736
LOWER IN low tide zone0.037736
LOWER IN depth 20-100cm0.037736
LOWER IN subsurface0.037736
absence of tobacco plants0.037736
LOWER IN presence of tobacco plants0.037736
presence of tobacco plants0.037736
LOWER IN absence of tobacco plants0.037736
LOWER IN depth 0-20cm0.037037
LOWER IN surface0.035714
sand0.034483
LOWER IN sand0.034483
LOWER IN rock0.033898
sediment0.033613
water0.031496
china0.020802
soil0.019002
united states of america0.014859
Fraction of dbbact annotations with this term covered by the query
TermScore
depth 0-20cm0.666667
rock0.500000
quarry0.500000
duluth complex0.500000
depth 2.5cm0.500000
greenschist0.500000
LOWER IN depth 2.5cm0.500000
hydrothermal vent0.500000
greece0.500000
marine hydrothermal vent0.500000
volcanic rock0.500000
volcanic crater0.500000
active vent0.500000
inactive vent0.500000
LOWER IN active vent0.500000
LOWER IN inactive vent0.500000
sandstone0.500000
grand staircase-escalante national park0.500000
depth (soil) 0-1cm0.500000
glacial ice0.500000
south shetland glacier0.500000
shetland islands0.500000
epipsammic0.500000
LOWER IN epilithic0.500000
epilithic0.500000
LOWER IN epipsammic0.500000
calvert island0.500000
low tide zone0.500000
LOWER IN high tide zone0.500000
high tide zone0.500000
LOWER IN low tide zone0.500000
LOWER IN depth 20-100cm0.500000
LOWER IN subsurface0.500000
depth 20-100cm0.500000
subsurface0.500000
without plants0.500000
difenoconazole0.500000
fungicide0.500000
tobacco field0.500000
limestone0.500000
minas gerais state0.500000
campos rupestres0.500000
tobacco plant present0.500000
absence of tobacco plants0.500000
LOWER IN presence of tobacco plants0.500000
presence of tobacco plants0.500000
LOWER IN absence of tobacco plants0.500000
pm100.500000
respirable suspended particulate matter0.500000
glacier0.400000
sulfide0.333333
LOWER IN depth0.333333
depth0.333333
LOWER IN depth 0-20cm0.333333
LOWER IN depth (soil) 15cm0.250000
depth (soil) 15cm0.250000
state of utah0.250000
province of british columbia0.250000
municipality of beijing0.250000
ph 70.200000
surface0.200000
LOWER IN surface0.200000
mediterranean sea0.166667
ice0.166667
filtered 0.2um0.166667
sand0.142857
LOWER IN sand0.142857
desert0.125000
LOWER IN rock0.125000
biochar0.125000
state of minnesota0.100000
river0.083333
ph 4-50.076923
biofilm0.076923
air0.076923
ocean0.062500
sweden0.062500
marine sediment0.058824
ph 7-80.052632
brazil0.052632
kingdom of spain0.047619
city0.045455
pacific ocean0.038462
canada0.033333
sediment0.029412
sea water0.027778
water0.018182
china0.010811
soil0.009901
united states of america0.007722
Fraction of annotations for the query sequences containing the term
TermScore
rock0.372549
depth 0-20cm0.294118
china0.274510
difenoconazole0.235294
fungicide0.235294
ph 7-80.235294
tobacco field0.235294
limestone0.235294
soil0.235294
united states of america0.196078
ice0.176471
glacier0.176471
quarry0.156863
state of minnesota0.156863
biofilm0.156863
sweden0.137255
hydrothermal vent0.117647
greece0.117647
marine sediment0.117647
mediterranean sea0.117647
marine hydrothermal vent0.117647
volcanic rock0.117647
volcanic crater0.117647
water0.117647
sea water0.117647
canada0.117647
province of british columbia0.117647
calvert island0.117647
pacific ocean0.117647
ocean0.117647
filtered 0.2um0.117647
biochar0.098039
duluth complex0.078431
ph 4-50.078431
sulfide0.078431
ph 70.078431
greenschist0.078431
kingdom of spain0.078431
river0.078431
without plants0.078431
tobacco plant present0.078431
active vent0.058824
inactive vent0.058824
epilithic0.058824
low tide zone0.058824
high tide zone0.058824
surface0.058824
depth 20-100cm0.058824
subsurface0.058824
depth 2.5cm0.039216
LOWER IN depth (soil) 15cm0.039216
LOWER IN depth0.039216
depth0.039216
depth (soil) 15cm0.039216
LOWER IN depth 2.5cm0.039216
state of utah0.039216
sandstone0.039216
grand staircase-escalante national park0.039216
desert0.039216
depth (soil) 0-1cm0.039216
glacial ice0.039216
south shetland glacier0.039216
shetland islands0.039216
sediment0.039216
minas gerais state0.039216
campos rupestres0.039216
brazil0.039216
pm100.039216
respirable suspended particulate matter0.039216
city0.039216
municipality of beijing0.039216
air0.039216
LOWER IN active vent0.019608
LOWER IN inactive vent0.019608
epipsammic0.019608
sand0.019608
LOWER IN epilithic0.019608
LOWER IN rock0.019608
LOWER IN sand0.019608
LOWER IN epipsammic0.019608
LOWER IN high tide zone0.019608
LOWER IN low tide zone0.019608
LOWER IN depth 20-100cm0.019608
LOWER IN subsurface0.019608
LOWER IN depth 0-20cm0.019608
LOWER IN surface0.019608
contamination0.019608
absence of tobacco plants0.019608
LOWER IN presence of tobacco plants0.019608
presence of tobacco plants0.019608
LOWER IN absence of tobacco plants0.019608
Number of experiments associating the term to the sequence
TermScore
rock4.000000
united states of america2.000000
ice2.000000
glacier2.000000
depth 0-20cm2.000000
china2.000000
quarry1.000000
duluth complex1.000000
ph 4-51.000000
state of minnesota1.000000
sulfide1.000000
depth 2.5cm1.000000
LOWER IN depth (soil) 15cm1.000000
LOWER IN depth1.000000
ph 71.000000
greenschist1.000000
depth1.000000
depth (soil) 15cm1.000000
LOWER IN depth 2.5cm1.000000
hydrothermal vent1.000000
greece1.000000
marine sediment1.000000
mediterranean sea1.000000
marine hydrothermal vent1.000000
volcanic rock1.000000
volcanic crater1.000000
water1.000000
sea water1.000000
active vent1.000000
inactive vent1.000000
LOWER IN active vent1.000000
LOWER IN inactive vent1.000000
state of utah1.000000
sandstone1.000000
grand staircase-escalante national park1.000000
desert1.000000
depth (soil) 0-1cm1.000000
glacial ice1.000000
south shetland glacier1.000000
shetland islands1.000000
biofilm1.000000
kingdom of spain1.000000
river1.000000
sediment1.000000
epipsammic1.000000
sand1.000000
LOWER IN epilithic1.000000
LOWER IN rock1.000000
epilithic1.000000
LOWER IN sand1.000000
LOWER IN epipsammic1.000000
canada1.000000
province of british columbia1.000000
calvert island1.000000
pacific ocean1.000000
ocean1.000000
low tide zone1.000000
LOWER IN high tide zone1.000000
high tide zone1.000000
LOWER IN low tide zone1.000000
LOWER IN depth 20-100cm1.000000
LOWER IN subsurface1.000000
surface1.000000
filtered 0.2um1.000000
sweden1.000000
LOWER IN depth 0-20cm1.000000
LOWER IN surface1.000000
depth 20-100cm1.000000
subsurface1.000000
contamination1.000000
without plants1.000000
difenoconazole1.000000
fungicide1.000000
ph 7-81.000000
tobacco field1.000000
limestone1.000000
soil1.000000
biochar1.000000
minas gerais state1.000000
campos rupestres1.000000
brazil1.000000
tobacco plant present1.000000
absence of tobacco plants1.000000
LOWER IN presence of tobacco plants1.000000
presence of tobacco plants1.000000
LOWER IN absence of tobacco plants1.000000
pm101.000000
respirable suspended particulate matter1.000000
city1.000000
municipality of beijing1.000000
air1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
205amnonhigh freq. in Ely Greenstone rock piles (dominant rock, united states of america, quarry, state of minnesota, ph 7, greenschist)2017-10-03v41 / 5approvedNo
548amnondominant minas gerais state, campos rupestres, brazil, rock2019-08-17v41 / 5approvedNo
252amnonhigh freq. in river rock biofilm (dominant biofilm, river, rock, biofilm, kingdom of spain, epilithic)2017-11-22v41 / 8approvedNo
609sheryoDominant in soil without tobacco plants amended with difenoconazole fungicide and biochar (dominant biochar, without plants, difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-07-05v41 / 9approvedNo
609sheryoDominant in soil without tobacco plants with difenoconazole fungicide amended with biochar (dominant soil, depth 0-20cm, limestone, tobacco field, china, ph 7-8, fungicide, difenoconazole, biochar)2020-04-21v41 / 9approvedNo
514amnondominant united states of america, state of utah, sandstone, grand staircase-escalante national park, desert, depth (soil) 0-1cm2019-03-25v41 / 10approvedNo
355amnonhigh freq. in rocks from low tide zone (dominant canada, province of british columbia, calvert island, pacific ocean, ocean, rock, low tide zone)2018-08-01v41 / 11approvedNo
362amnondominant hydrothermal vent, greece, marine sediment, mediterranean sea, marine hydrothermal vent, volcanic rock, volcanic crater, water, sea water, inactive vent2018-08-29v41 / 12approvedNo
609sheryoDominant in soil without tobacco plants amended with difenoconazole fungicide (dominant without plants, difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-07-05v41 / 12approvedNo
609sheryoDominant in soil without tobacco plants with difenoconazole fungicide amended and without biochar (dominant difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-04-21v41 / 12approvedNo
609sheryoDominant in soil with tobacco plants amended with difenoconazole fungicide (dominant tobacco plant present, difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-04-21v41 / 13approvedNo
609sheryoDominant in soil with tobacco plants amended with difenoconazole fungicide and biochar (dominant biochar, tobacco plant present, difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-04-21v41 / 13approvedNo
811amnondominant glacial ice, south shetland glacier, shetland islands, glacier, ice2021-06-22v31 / 16approvedNo
878amnondominant pm10, municipality of beijing, china, respirable suspended particulate matter, air, city2022-03-11v31 / 16approvedNo
355amnoncommon in rocks from high tide zone (dominant canada, province of british columbia, calvert island, pacific ocean, ocean, rock, high tide zone)2018-08-01v41 / 17approvedNo
362amnondominant hydrothermal vent, greece, marine sediment, mediterranean sea, marine hydrothermal vent, volcanic rock, volcanic crater, water, sea water, active vent2018-08-29v41 / 18approvedNo
763amnondominant filtered 0.2um, depth 20-100cm, subsurface, ice, glacier, sweden2021-04-10v31 / 18approvedNo
205amnonhigh freq. in rock piles from duluth complex (dominant rock, united states of america, quarry, duluth complex, ph 4-5, state of minnesota, sulfide)2017-10-03v41 / 18approvedNo
763amnondominant depth 0-20cm, surface, filtered 0.2um, ice, glacier, sweden2021-04-10v31 / 19approvedNo
362amnon high in active vent compared to inactive vent in hydrothermal vent greece marine sediment mediterranean sea marine hydrothermal vent volcanic rock volcanic crater water sea water 2018-08-29v41 / 37approvedNo
763amnon high in depth 20-100cm subsurface compared to depth 0-20cm surface in filtered 0.2um ice glacier sweden 2021-04-10v31 / 42approvedNo
763amnon high in depth 0-20cm surface compared to depth 20-100cm subsurface in filtered 0.2um ice glacier sweden 2021-04-10v31 / 43approvedNo
252amnonlower on sand biofilm compared to rock biofilm in river ( high in rock epilithic compared to sand epipsammic in biofilm kingdom of spain biofilm river sediment )2017-11-22v41 / 56approvedNo
355amnonlower in rocks from low tide zone compared to high tide zone ( high in high tide zone compared to low tide zone in canada province of british columbia calvert island pacific ocean ocean rock )2018-08-01v41 / 62approvedNo
763amnonhigher in blank compared to samples (contamination)2021-04-10v31 / 70approvedNo
355amnonhigher in rocks from low tide zone compared to high tide zone ( high in low tide zone compared to high tide zone in canada province of british columbia calvert island pacific ocean ocean rock )2018-08-01v41 / 74approvedNo
763amnoncommon filtered 0.2um, depth 20-100cm, subsurface, ice, glacier, sweden2021-04-10v31 / 74approvedNo
609sheryohigher in soil without tobacco plants and with difenoconazole fungicide ( high in absence of tobacco plants compared to presence of tobacco plants in difenoconazole fungicide ph 7-8 china tobacco field limestone depth 0-20cm soil )2020-04-21v41 / 78approvedNo
763amnoncommon depth 0-20cm, surface, filtered 0.2um, ice, glacier, sweden2021-04-10v31 / 98approvedNo
205amnonhigher in depth 15cm compared to 2.5cm in rock piles in duluth complex ( high in depth (soil) 15cm depth compared to depth 2.5cm in rock united states of america quarry duluth complex ph 4-5 state of minnesota sulfide )2017-10-03v41 / 120approvedNo
362amnon high in inactive vent compared to active vent in hydrothermal vent greece marine sediment mediterranean sea marine hydrothermal vent volcanic rock volcanic crater water sea water 2018-08-29v41 / 129approvedNo
609sheryohigher in soil with tobacco plants and with difenoconazole fungicide ( high in presence of tobacco plants compared to absence of tobacco plants in difenoconazole fungicide ph 7-8 china tobacco field limestone depth 0-20cm soil )2020-04-21v41 / 131approvedNo
514amnoncommon united states of america, state of utah, sandstone, grand staircase-escalante national park, desert, depth (soil) 0-1cm2019-03-25v41 / 139approvedNo
355amnoncommon in rocks from high tide zone (common canada, province of british columbia, calvert island, pacific ocean, ocean, rock, high tide zone)2018-08-01v41 / 148approvedNo
362amnoncommon hydrothermal vent, greece, marine sediment, mediterranean sea, marine hydrothermal vent, volcanic rock, volcanic crater, water, sea water, active vent2018-08-29v41 / 150approvedNo
878amnoncommon pm10, respirable suspended particulate matter, city, municipality of beijing, china, air2022-03-11v31 / 203approvedNo
205amnoncommon in rock piles from duluth complex (common rock, united states of america, quarry, duluth complex, ph 4-5, state of minnesota, sulfide)2017-10-03v41 / 205approvedNo
355amnoncommon in rocks from low tide zone (common canada, province of british columbia, calvert island, pacific ocean, ocean, rock, low tide zone)2018-08-01v41 / 206approvedNo
811amnoncommon glacial ice, south shetland glacier, shetland islands, ice, glacier2021-06-22v31 / 234approvedNo
205amnoncommon in Ely Greenstone rock piles (common rock, united states of america, quarry, state of minnesota, ph 7, greenschist)2017-10-03v41 / 255approvedNo
205amnonlower in depth 15cm compared to 2.5cm in rock piles in duluth complex ( high in depth 2.5cm compared to depth (soil) 15cm depth in rock united states of america quarry duluth complex ph 4-5 state of minnesota sulfide )2017-10-03v41 / 265approvedNo
252amnonhigh on sand biofilm compared to rock biofilm in river ( high in epipsammic sand compared to epilithic rock in biofilm kingdom of spain biofilm river sediment )2017-11-22v41 / 374approvedNo
362amnoncommon hydrothermal vent, greece, marine sediment, mediterranean sea, marine hydrothermal vent, volcanic rock, volcanic crater, water, sea water, inactive vent2018-08-29v41 / 480approvedNo
205amnonlower in depth 15cm compared to 2.5cm in Ely Greenstone rock piles ( high in depth 2.5cm compared to depth depth (soil) 15cm in rock united states of america quarry state of minnesota ph 7 greenschist )2017-10-03v41 / 499approvedNo
205amnonhigher in depth 15cm compared to 2.5cm in Ely Greenstone rock piles ( high in depth depth (soil) 15cm compared to depth 2.5cm in rock united states of america quarry state of minnesota ph 7 greenschist )2017-10-03v41 / 562approvedNo
609sheryoCommon in soil with tobacco plants amended with difenoconazole fungicide and biochar (common biochar, tobacco plant present, difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-04-21v41 / 634approvedNo
609sheryocommon in soil with tobacco plants amended with difenoconazole fungicide (common tobacco plant present, difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-04-21v41 / 671approvedNo
609sheryoCommon in soil without tobacco plants amended with difenoconazole fungicide and biochar (common biochar, without plants, difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-07-05v41 / 910approvedNo
609sheryoCommon in soil without tobacco plants amended with difenoconazole fungicide (common without plants, difenoconazole, fungicide, ph 7-8, china, tobacco field, limestone, depth 0-20cm, soil)2020-07-05v41 / 915approvedNo
548amnoncommon minas gerais state, campos rupestres, brazil, rock2019-08-17v41 / 924approvedNo
252amnoncommon in river rock biofilm (common biofilm, kingdom of spain, biofilm, river, rock, epilithic)2017-11-22v41 / 1081approvedNo

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