Summary for ontology term: japan

Number of annotations with term: 41

Annotations:

common ontology terms
term enrichment score
TermScore
japan0.947368
andrias japonicus0.226415
japanese giant salamander0.226415
mountain0.226415
balb/c0.219178
snow field0.203390
c57bl/60.173077
hokkaido0.163265
ph 5.40.163265
stress0.131868
depth 6-7m0.127660
topsoil0.123077
depth 1-2m0.120000
depth 0-10cm0.115942
skin0.115226
forest0.103896
mus musculus0.097603
LOWER IN stress0.090909
tcr-alpha knockout0.088889
lithobates catesbeianus0.088889
malaria0.088889
LOWER IN malaria0.088889
physopelta0.088889
rana catesbeiana0.085106
bullfrog0.085106
early time points0.081633
LOWER IN late time points0.081633
late time points0.078431
LOWER IN early time points0.078431
midgut0.078431
frog0.072727
air0.063492
research facility0.059717
LOWER IN snow0.046512
LOWER IN snow covered soil0.046512
non snow covered soil0.046512
snow covered soil0.046512
LOWER IN non snow covered soil0.046512
experimental cerebral malaria0.046512
LOWER IN experimental cerebral malaria0.046512
LOWER IN amphibian larval stage0.046512
LOWER IN pond water0.046512
nature reserve0.046512
LOWER IN zoo0.046512
zoo0.046512
LOWER IN nature reserve0.046512
LOWER IN depth 1-2m0.046512
LOWER IN depth 6-7m0.046512
LOWER IN balb/c0.045455
amphibian larval stage0.045455
snow0.044444
LOWER IN c57bl/60.044444
pond water0.044444
LOWER IN zoological garden0.044444
LOWER IN pond0.044444
LOWER IN control0.043924
LOWER IN tadpole0.043478
LOWER IN larval stage0.043478
zoological garden0.043478
tadpole0.042553
LOWER IN skin0.042553
adult0.042403
control0.041739
pond0.041667
LOWER IN water0.038462
mouse0.038388
LOWER IN winter0.037736
winter0.037037
larval stage0.037037
summer0.035714
LOWER IN summer0.035714
LOWER IN adult0.035088
soil0.033755
feces0.030853
water0.023529
Fraction of dbbact annotations with this term covered by the query
TermScore
japan0.900000
stress0.666667
LOWER IN stress0.666667
tcr-alpha knockout0.500000
hokkaido0.500000
ph 5.40.500000
LOWER IN snow0.500000
LOWER IN snow covered soil0.500000
non snow covered soil0.500000
snow covered soil0.500000
LOWER IN non snow covered soil0.500000
lithobates catesbeianus0.500000
malaria0.500000
experimental cerebral malaria0.500000
LOWER IN malaria0.500000
LOWER IN experimental cerebral malaria0.500000
physopelta0.500000
andrias japonicus0.500000
japanese giant salamander0.500000
LOWER IN amphibian larval stage0.500000
LOWER IN pond water0.500000
nature reserve0.500000
LOWER IN zoo0.500000
zoo0.500000
LOWER IN nature reserve0.500000
mountain0.500000
depth 6-7m0.500000
LOWER IN depth 1-2m0.500000
LOWER IN depth 6-7m0.500000
rana catesbeiana0.333333
bullfrog0.333333
LOWER IN balb/c0.333333
amphibian larval stage0.333333
snow field0.333333
depth 1-2m0.333333
balb/c0.250000
snow0.250000
early time points0.250000
LOWER IN late time points0.250000
LOWER IN c57bl/60.250000
pond water0.250000
LOWER IN zoological garden0.250000
LOWER IN pond0.250000
late time points0.200000
LOWER IN early time points0.200000
midgut0.200000
LOWER IN tadpole0.200000
LOWER IN larval stage0.200000
zoological garden0.200000
topsoil0.166667
tadpole0.166667
LOWER IN skin0.166667
c57bl/60.142857
depth 0-10cm0.142857
frog0.142857
pond0.142857
forest0.111111
LOWER IN water0.090909
air0.090909
skin0.086957
LOWER IN winter0.083333
winter0.076923
larval stage0.076923
summer0.066667
LOWER IN summer0.066667
LOWER IN adult0.062500
mus musculus0.054545
research facility0.031915
adult0.029851
LOWER IN control0.026786
control0.026549
water0.022727
mouse0.020833
soil0.020408
feces0.015957
Fraction of annotations for the query sequences containing the term
TermScore
japan1.000000
mus musculus0.463415
research facility0.463415
feces0.463415
mouse0.243902
c57bl/60.219512
balb/c0.195122
skin0.170732
andrias japonicus0.146341
japanese giant salamander0.146341
snow field0.146341
mountain0.146341
LOWER IN control0.121951
control0.097561
soil0.097561
depth 0-10cm0.097561
hokkaido0.097561
forest0.097561
topsoil0.097561
ph 5.40.097561
stress0.073171
adult0.073171
depth 6-7m0.073171
depth 1-2m0.073171
tcr-alpha knockout0.048780
LOWER IN stress0.048780
rana catesbeiana0.048780
bullfrog0.048780
lithobates catesbeianus0.048780
frog0.048780
malaria0.048780
late time points0.048780
LOWER IN early time points0.048780
early time points0.048780
LOWER IN malaria0.048780
LOWER IN late time points0.048780
midgut0.048780
physopelta0.048780
air0.048780
LOWER IN snow0.024390
LOWER IN snow covered soil0.024390
non snow covered soil0.024390
summer0.024390
LOWER IN winter0.024390
snow0.024390
snow covered soil0.024390
winter0.024390
LOWER IN non snow covered soil0.024390
LOWER IN summer0.024390
experimental cerebral malaria0.024390
LOWER IN experimental cerebral malaria0.024390
LOWER IN balb/c0.024390
LOWER IN c57bl/60.024390
LOWER IN tadpole0.024390
LOWER IN amphibian larval stage0.024390
LOWER IN larval stage0.024390
amphibian larval stage0.024390
larval stage0.024390
tadpole0.024390
LOWER IN adult0.024390
LOWER IN water0.024390
LOWER IN pond water0.024390
water0.024390
pond water0.024390
LOWER IN skin0.024390
pond0.024390
nature reserve0.024390
LOWER IN zoological garden0.024390
LOWER IN zoo0.024390
zoological garden0.024390
zoo0.024390
LOWER IN pond0.024390
LOWER IN nature reserve0.024390
LOWER IN depth 1-2m0.024390
LOWER IN depth 6-7m0.024390
Exp. ID User ID Description Date Sequences
41amnonlower in water stress compared to control in tcr-b deficient mice ( high in control compared to stress in mus musculus research facility feces tcr-alpha knockout japan )2016-12-101 / 2
172amnonhighfreq japan, midgut, physopelta2017-07-251 / 2
41amnonhigher in water stress compared to control in tcr-b deficient mouse ( high in stress compared to control in mus musculus research facility feces tcr-alpha knockout japan )2016-12-101 / 3
356amnonhigh freq. in deciduous broad leaved forest top soil in japan (highfreq soil, depth 0-10cm, japan, hokkaido, forest, topsoil, ph 5.4)2018-08-151 / 3
172amnoncommon japan, midgut, physopelta2017-07-251 / 3
338amnon high in water pond water compared to skin in andrias japonicus japanese giant salamander japan 2018-05-211 / 3
287amnon high in depth 6-7m compared to depth 1-2m in japan snow field mountain 2018-01-291 / 4
338amnon high in skin compared to water pond water in andrias japonicus japanese giant salamander japan 2018-05-211 / 7
92amnoncommon air, japan2017-03-091 / 9
92amnonhighfreq air, japan2017-03-091 / 10
287amnon high in depth 1-2m compared to depth 6-7m in japan snow field mountain 2018-01-291 / 12
42amnonhigher in stressed mice compared to control in balb/c tcr-b deficient mice ( high in stress compared to control in mus musculus research facility japan feces balb/c )2016-12-101 / 14
42amnonhigher on stressed mice compared to control in c57bl tcr-b deficient mice ( high in stress compared to control in c57bl/6 mus musculus research facility japan feces )2016-12-101 / 15
492amnonhighfreq skin, adult, japan, rana catesbeiana, bullfrog, lithobates catesbeianus, frog2019-02-271 / 16
42amnonhigh freq. in tcr-b deficient c57bl6 mice (highfreq mus musculus, research facility, japan, feces, c57bl/6)2016-12-101 / 17
503amnonincreases following malaria infection ( high in malaria late time points compared to control early time points in mouse mus musculus research facility japan feces balb/c )2019-03-121 / 17
287amnonhighfreq japan, snow field, mountain, depth 1-2m2018-01-291 / 17
287amnonhighfreq japan, snow field, mountain, depth 6-7m2018-01-291 / 18
503amnonhighfreq mouse, mus musculus, research facility, japan, feces, c57bl/62019-03-121 / 19
503amnon high in c57bl/6 compared to balb/c in mouse mus musculus research facility japan feces 2019-03-121 / 21
503amnonhighfreq mouse, mus musculus, research facility, japan, feces, balb/c2019-03-121 / 21
42amnonhigh freq. in tcr-b deficient balb/c mice (highfreq mus musculus, research facility, japan, feces, balb/c)2016-12-101 / 23
338amnon high in adult compared to tadpole amphibian larval stage larval stage in andrias japonicus japanese giant salamander japan skin 2018-05-211 / 24
503amnondecreases following malaria infection ( high in control early time points compared to malaria late time points in mouse mus musculus research facility japan feces balb/c )2019-03-121 / 29
287amnoncommon japan, snow field, mountain, depth 1-2m2018-01-291 / 35
503amnonincreases following malaria infection ( high in malaria late time points experimental cerebral malaria compared to control early time points in mouse mus musculus research facility c57bl/6 japan feces )2019-03-121 / 38
287amnoncommon japan, snow field, mountain, depth 6-7m2018-01-291 / 47
338amnonhigher in wild salamanders compared to zoo grown salamanders ( high in pond nature reserve compared to zoological garden zoo in andrias japonicus japanese giant salamander japan skin )2018-05-211 / 51
503amnondecreases following malaria infection ( high in control early time points compared to malaria late time points experimental cerebral malaria in mouse mus musculus research facility c57bl/6 japan feces )2019-03-121 / 58
338amnon high in amphibian larval stage larval stage tadpole compared to adult in andrias japonicus japanese giant salamander japan skin 2018-05-211 / 59
356amnonlower in non-snow covered period ( high in snow snow covered soil winter compared to non snow covered soil summer in soil depth 0-10cm japan hokkaido forest topsoil ph 5.4 )2018-08-151 / 78
503amnon high in balb/c compared to c57bl/6 in mouse mus musculus research facility japan feces 2019-03-121 / 91
42amnonlower on stressed mice compared to control in c57bl tcr-b deficient mice ( high in control compared to stress in c57bl/6 mus musculus research facility japan feces )2016-12-101 / 108
356amnonhigher in non-snow covered period ( high in non snow covered soil summer compared to snow snow covered soil winter in soil depth 0-10cm japan hokkaido forest topsoil ph 5.4 )2018-08-151 / 113
42amnoncommon in tcr-b deficient c57bl6 mice (common feces, research facility, mus musculus, c57bl/6, japan)2016-12-101 / 201
503amnoncommon mouse, mus musculus, research facility, japan, feces, c57bl/62019-03-121 / 210
42amnoncommon in tcr-b deficient balb/c mice (common mus musculus, research facility, japan, feces, balb/c)2016-12-101 / 227
492amnoncommon skin, adult, japan, rana catesbeiana, bullfrog, lithobates catesbeianus, frog2019-02-271 / 236
503amnoncommon mouse, mus musculus, research facility, japan, feces, balb/c2019-03-121 / 257
338amnonlower in wild salamanders compared to zoo grown salamanders ( high in zoological garden zoo compared to pond nature reserve in skin japan andrias japonicus japanese giant salamander )2018-05-211 / 334
356amnoncommon in deciduous broad leaved forest top soil in japan (common soil, depth 0-10cm, japan, hokkaido, forest, topsoil, ph 5.4)2018-08-151 / 834

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