Summary for ontology term: japan

Number of annotations with term: 79

Annotations:

common ontology terms
term enrichment score
TermScore
japan0.965517
hokkaido0.310680
okinawa islands0.261682
near shore0.231405
filtered 0.2um0.171779
normal weather0.168421
starfish0.168421
tonsillectomy0.168421
coelomic fluid0.155340
balb/c0.144144
palatine tonsil0.134454
andrias japonicus0.131868
japanese giant salamander0.131868
mountain0.123711
snow field0.116505
c57bl/60.115756
surface water0.113360
summer0.095808
ph 5.40.091954
asterias amurensis0.091954
patiria pectinifera0.091954
sea water0.091371
autumn0.082353
mus musculus0.080565
city0.078176
skin0.071979
stress0.071856
tropical storm0.070588
storm0.070588
typhoon0.070588
depth 6-7m0.070588
recurrent tonsillitis0.070588
topsoil0.069565
forest ecosystem0.069565
depth 1-2m0.068182
iga glomerulonephritis0.068182
tonsillitis0.068182
depth 0-10cm0.061069
wild0.059041
adult0.052539
LOWER IN stress0.048780
malaria0.048193
LOWER IN malaria0.048193
LOWER IN normal weather0.048193
tcr-alpha knockout0.048193
lithobates catesbeianus0.048193
LOWER IN starfish0.048193
LOWER IN coelomic fluid0.048193
LOWER IN patiria pectinifera0.048193
LOWER IN asterias amurensis0.048193
physopelta0.048193
rana catesbeiana0.047059
bullfrog0.047059
midgut0.044944
early time points0.043956
LOWER IN late time points0.043956
late time points0.042105
LOWER IN early time points0.042105
frog0.042105
LOWER IN sea water0.040404
LOWER IN summer0.039604
air0.038835
research facility0.038592
LOWER IN wild0.038095
mouse0.031797
feces0.031233
LOWER IN control0.027599
control0.025946
experimental cerebral malaria0.024691
LOWER IN experimental cerebral malaria0.024691
LOWER IN tropical storm0.024691
LOWER IN storm0.024691
LOWER IN typhoon0.024691
LOWER IN depth 1-2m0.024691
LOWER IN depth 6-7m0.024691
LOWER IN snow0.024691
LOWER IN snow covered soil0.024691
non snow covered soil0.024691
snow covered soil0.024691
LOWER IN non snow covered soil0.024691
LOWER IN amphibian larval stage0.024691
LOWER IN pond water0.024691
LOWER IN zoo0.024691
area designated as a nature reserve0.024691
zoo0.024691
LOWER IN area designated as a nature reserve0.024691
LOWER IN recurrent tonsillitis0.024691
LOWER IN iga glomerulonephritis0.024691
LOWER IN balb/c0.024390
amphibian larval stage0.024390
LOWER IN tonsillitis0.024390
LOWER IN c57bl/60.024096
snow0.024096
LOWER IN pond0.024096
LOWER IN iga positive fraction0.024096
iga negative fraction0.024096
LOWER IN iga negative fraction0.024096
iga positive fraction0.024096
LOWER IN tadpole0.023810
pond water0.023810
Fraction of dbbact annotations with this term covered by the query
TermScore
japan0.933333
stress0.666667
LOWER IN stress0.666667
hokkaido0.666667
experimental cerebral malaria0.500000
malaria0.500000
LOWER IN experimental cerebral malaria0.500000
LOWER IN malaria0.500000
okinawa islands0.500000
LOWER IN tropical storm0.500000
normal weather0.500000
LOWER IN normal weather0.500000
tropical storm0.500000
LOWER IN storm0.500000
LOWER IN typhoon0.500000
storm0.500000
typhoon0.500000
depth 6-7m0.500000
LOWER IN depth 1-2m0.500000
LOWER IN depth 6-7m0.500000
tcr-alpha knockout0.500000
ph 5.40.500000
LOWER IN snow0.500000
LOWER IN snow covered soil0.500000
non snow covered soil0.500000
snow covered soil0.500000
LOWER IN non snow covered soil0.500000
lithobates catesbeianus0.500000
starfish0.500000
asterias amurensis0.500000
patiria pectinifera0.500000
LOWER IN starfish0.500000
LOWER IN coelomic fluid0.500000
LOWER IN patiria pectinifera0.500000
LOWER IN asterias amurensis0.500000
physopelta0.500000
andrias japonicus0.500000
japanese giant salamander0.500000
LOWER IN amphibian larval stage0.500000
LOWER IN pond water0.500000
LOWER IN zoo0.500000
area designated as a nature reserve0.500000
zoo0.500000
LOWER IN area designated as a nature reserve0.500000
LOWER IN recurrent tonsillitis0.500000
tonsillectomy0.500000
LOWER IN iga glomerulonephritis0.500000
recurrent tonsillitis0.500000
LOWER IN balb/c0.333333
near shore0.333333
mountain0.333333
depth 1-2m0.333333
rana catesbeiana0.333333
bullfrog0.333333
coelomic fluid0.333333
amphibian larval stage0.333333
LOWER IN tonsillitis0.333333
iga glomerulonephritis0.333333
tonsillitis0.333333
balb/c0.250000
LOWER IN c57bl/60.250000
snow field0.250000
snow0.250000
LOWER IN pond0.250000
LOWER IN iga positive fraction0.250000
iga negative fraction0.250000
LOWER IN iga negative fraction0.250000
iga positive fraction0.250000
midgut0.200000
LOWER IN tadpole0.200000
pond water0.200000
palatine tonsil0.200000
early time points0.166667
LOWER IN late time points0.166667
filtered 0.2um0.166667
LOWER IN larval stage0.166667
tadpole0.166667
LOWER IN zoological garden0.142857
late time points0.125000
LOWER IN early time points0.125000
LOWER IN autumn0.125000
frog0.125000
c57bl/60.117647
topsoil0.111111
forest ecosystem0.111111
LOWER IN skin0.111111
pond0.111111
LOWER IN sea water0.100000
summer0.090909
LOWER IN summer0.090909
surface water0.083333
air0.083333
autumn0.076923
depth 0-10cm0.076923
LOWER IN wild0.076923
LOWER IN water0.076923
larval stage0.071429
LOWER IN winter0.066667
zoological garden0.066667
skin0.060606
Fraction of annotations for the query sequences containing the term
TermScore
japan1.000000
feces0.291139
mus musculus0.240506
research facility0.240506
sea water0.227848
hokkaido0.202532
adult0.189873
okinawa islands0.177215
filtered 0.2um0.177215
near shore0.177215
surface water0.177215
homo sapiens0.151899
city0.151899
mouse0.126582
c57bl/60.113924
balb/c0.101266
summer0.101266
normal weather0.101266
starfish0.101266
coelomic fluid0.101266
wild0.101266
tonsillectomy0.101266
palatine tonsil0.101266
autumn0.088608
skin0.088608
snow field0.075949
mountain0.075949
andrias japonicus0.075949
japanese giant salamander0.075949
LOWER IN control0.063291
control0.050633
soil0.050633
depth 0-10cm0.050633
topsoil0.050633
ph 5.40.050633
forest ecosystem0.050633
asterias amurensis0.050633
patiria pectinifera0.050633
tropical storm0.037975
storm0.037975
typhoon0.037975
depth 6-7m0.037975
depth 1-2m0.037975
stress0.037975
iga glomerulonephritis0.037975
recurrent tonsillitis0.037975
tonsillitis0.037975
late time points0.025316
LOWER IN early time points0.025316
malaria0.025316
early time points0.025316
LOWER IN late time points0.025316
LOWER IN malaria0.025316
LOWER IN normal weather0.025316
LOWER IN summer0.025316
tcr-alpha knockout0.025316
LOWER IN stress0.025316
rana catesbeiana0.025316
bullfrog0.025316
lithobates catesbeianus0.025316
frog0.025316
LOWER IN sea water0.025316
LOWER IN starfish0.025316
LOWER IN wild0.025316
LOWER IN coelomic fluid0.025316
LOWER IN patiria pectinifera0.025316
LOWER IN asterias amurensis0.025316
midgut0.025316
physopelta0.025316
air0.025316
experimental cerebral malaria0.012658
LOWER IN experimental cerebral malaria0.012658
LOWER IN balb/c0.012658
LOWER IN c57bl/60.012658
LOWER IN tropical storm0.012658
LOWER IN storm0.012658
LOWER IN typhoon0.012658
LOWER IN depth 1-2m0.012658
LOWER IN depth 6-7m0.012658
LOWER IN autumn0.012658
LOWER IN snow0.012658
LOWER IN snow covered soil0.012658
non snow covered soil0.012658
LOWER IN winter0.012658
snow0.012658
snow covered soil0.012658
winter0.012658
LOWER IN non snow covered soil0.012658
LOWER IN tadpole0.012658
LOWER IN amphibian larval stage0.012658
LOWER IN larval stage0.012658
amphibian larval stage0.012658
larval stage0.012658
tadpole0.012658
LOWER IN adult0.012658
LOWER IN water0.012658
LOWER IN pond water0.012658
water0.012658
pond water0.012658
LOWER IN skin0.012658
Exp. ID User ID Description Date Region Flag Sequences
41amnonlower in water stress compared to control in tcr-b deficient mice ( high in control compared to stress in mus musculus research facility feces tcr-alpha knockout japan )2016-12-10v4No1 / 2
172amnondominant midgut, physopelta, japan2017-07-25v4No1 / 2
41amnonhigher in water stress compared to control in tcr-b deficient mouse ( high in stress compared to control in mus musculus research facility feces tcr-alpha knockout japan )2016-12-10v4No1 / 3
356amnonhigh freq. in deciduous broad leaved forest top soil in japan (dominant soil, depth 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 3
172amnoncommon midgut, physopelta, japan2017-07-25v4No1 / 3
338amnon high in water pond water compared to skin in andrias japonicus japanese giant salamander japan 2018-05-21v4No1 / 3
287amnon high in depth 6-7m compared to depth 1-2m in snow field mountain japan 2018-01-29v4No1 / 4
550amnondominant city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / 5
550amnon high in starfish wild coelomic fluid asterias amurensis compared to sea water in city hokkaido japan 2019-08-18v4No1 / 5
550amnondominant city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / 6
773amnon high in recurrent tonsillitis tonsillitis compared to iga glomerulonephritis in homo sapiens adult japan tonsillectomy palatine tonsil 2021-04-23v4No1 / 6
550amnon high in asterias amurensis compared to patiria pectinifera in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / 7
338amnon high in skin compared to water pond water in andrias japonicus japanese giant salamander japan 2018-05-21v4No1 / 7
807amnondominant tropical storm, summer, okinawa islands, japan, filtered 0.2um, near shore, sea water, surface water2021-06-20v3No1 / 8
92amnoncommon air, japan2017-03-09v4No1 / 9
773amnonhigh in non iga bound bacteria compared to iga bound bacteria ( high in iga negative fraction compared to iga positive fraction in homo sapiens adult japan tonsillectomy palatine tonsil )2021-04-23v4No1 / 9
773amnonhigh in iga bound bacteria compared to non iga bound bacteria ( high in iga positive fraction compared to iga negative fraction in homo sapiens adult japan tonsillectomy palatine tonsil )2021-04-23v4No1 / 9
92amnondominant air, japan2017-03-09v4No1 / 10
287amnon high in depth 1-2m compared to depth 6-7m in snow field mountain japan 2018-01-29v4No1 / 12
807amnondominant storm, typhoon, autumn, okinawa islands, japan, filtered 0.2um, near shore, sea water, surface water2021-06-20v3No1 / 12
773amnon high in iga glomerulonephritis compared to recurrent tonsillitis tonsillitis in homo sapiens adult japan tonsillectomy palatine tonsil 2021-04-23v4No1 / 12
807amnondominant autumn, normal weather, okinawa islands, japan, filtered 0.2um, near shore, sea water, surface water2021-06-20v3No1 / 14
807amnondominant normal weather, summer, okinawa islands, japan, filtered 0.2um, near shore, sea water, surface water2021-06-20v3No1 / 14
834amnondominant homo sapiens, feces, japan, adult2021-09-11v1No1 / 14
42amnonhigher in stressed mice compared to control in balb/c tcr-b deficient mice ( high in stress compared to control in mus musculus research facility feces balb/c japan )2016-12-10v4No1 / 14
42amnonhigher on stressed mice compared to control in c57bl tcr-b deficient mice ( high in stress compared to control in c57bl/6 mus musculus research facility feces japan )2016-12-10v4No1 / 15
550amnoncommon city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / 15
550amnon high in starfish coelomic fluid wild patiria pectinifera compared to sea water in city hokkaido japan 2019-08-18v4No1 / 15
807amnon high in normal weather compared to tropical storm in summer okinawa islands japan filtered 0.2um near shore sea water surface water 2021-06-20v3No1 / 16
492amnondominant skin, adult, rana catesbeiana, bullfrog, lithobates catesbeianus, frog, japan2019-02-27v4No1 / 16
503amnonincreases following malaria infection ( high in late time points malaria compared to control early time points in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 17
807amnonlower during typhoon with red soil pollution compared to normal weather ( high in normal weather compared to storm typhoon in autumn near shore japan filtered 0.2um surface water okinawa islands sea water )2021-06-20v3No1 / 17
287amnondominant snow field, mountain, depth 1-2m, japan2018-01-29v4No1 / 17
42amnonhigh freq. in tcr-b deficient c57bl6 mice (dominant mus musculus, research facility, feces, c57bl/6, japan)2016-12-10v4No1 / 17
287amnondominant snow field, mountain, depth 6-7m, japan2018-01-29v4No1 / 18
503amnondominant mouse, mus musculus, research facility, feces, c57bl/6, japan2019-03-12v4No1 / 19
550amnondominant sea water, hokkaido, city, japan2019-08-18v4No1 / 20
503amnon high in c57bl/6 compared to balb/c in mouse mus musculus research facility feces japan 2019-03-12v4No1 / 21
503amnondominant mouse, mus musculus, research facility, feces, balb/c, japan2019-03-12v4No1 / 21
835amnondominant feces, homo sapiens, japan, adult2021-09-11v3No1 / 21
773amnondominant iga glomerulonephritis, homo sapiens, adult, japan, tonsillectomy, palatine tonsil2021-04-23v4No1 / 21
42amnonhigh freq. in tcr-b deficient balb/c mice (dominant mus musculus, research facility, feces, balb/c, japan)2016-12-10v4No1 / 23
773amnondominant recurrent tonsillitis, tonsillitis, homo sapiens, adult, japan, tonsillectomy, palatine tonsil2021-04-23v4No1 / 23
338amnon high in adult compared to tadpole amphibian larval stage larval stage in andrias japonicus japanese giant salamander skin japan 2018-05-21v4No1 / 24
503amnondecreases following malaria infection ( high in control early time points compared to late time points malaria in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 29
287amnoncommon snow field, mountain, depth 1-2m, japan2018-01-29v4No1 / 35
503amnonincreases following malaria infection ( high in late time points experimental cerebral malaria malaria compared to control early time points in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 38
835amnoncommon adult, japan, homo sapiens, feces2021-09-11v3No1 / 40
773amnoncommon recurrent tonsillitis, tonsillitis, homo sapiens, adult, japan, tonsillectomy, palatine tonsil2021-04-23v4No1 / 45
287amnoncommon snow field, mountain, depth 6-7m, japan2018-01-29v4No1 / 47
834amnoncommon adult, japan, feces, homo sapiens2021-09-11v1No1 / 50
338amnonhigher in wild salamanders compared to zoo grown salamanders ( high in pond area designated as a nature reserve compared to zoological garden zoo in andrias japonicus japanese giant salamander skin japan )2018-05-21v4No1 / 51
773amnoncommon iga glomerulonephritis, homo sapiens, adult, japan, tonsillectomy, palatine tonsil2021-04-23v4No1 / 54
503amnondecreases following malaria infection ( high in control early time points compared to late time points experimental cerebral malaria malaria in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 58
338amnon high in amphibian larval stage larval stage tadpole compared to adult in andrias japonicus japanese giant salamander skin japan 2018-05-21v4No1 / 59
807amnon high in autumn compared to summer in normal weather okinawa islands japan filtered 0.2um near shore sea water surface water 2021-06-20v3No1 / 78
356amnonlower in non-snow covered period ( high in snow snow covered soil winter compared to non snow covered soil summer in soil depth 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )2018-08-15v4No1 / 78
550amnoncommon city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / 85
503amnon high in balb/c compared to c57bl/6 in mouse mus musculus research facility feces japan 2019-03-12v4No1 / 91
42amnonlower on stressed mice compared to control in c57bl tcr-b deficient mice ( high in control compared to stress in c57bl/6 mus musculus research facility feces japan )2016-12-10v4No1 / 108
807amnon high in summer compared to autumn in normal weather okinawa islands japan filtered 0.2um near shore sea water surface water 2021-06-20v3No1 / 109
356amnonhigher in non-snow covered period ( high in non snow covered soil summer compared to snow snow covered soil winter in soil depth 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )2018-08-15v4No1 / 113
807amnoncommon normal weather, summer, okinawa islands, japan, filtered 0.2um, near shore, sea water, surface water2021-06-20v3No1 / 142
550amnon high in sea water compared to starfish wild coelomic fluid patiria pectinifera in city hokkaido japan 2019-08-18v4No1 / 185
42amnoncommon in tcr-b deficient c57bl6 mice (common feces, research facility, mus musculus, c57bl/6, japan)2016-12-10v4No1 / 201
503amnoncommon mouse, mus musculus, research facility, feces, c57bl/6, japan2019-03-12v4No1 / 210
42amnoncommon in tcr-b deficient balb/c mice (common mus musculus, research facility, feces, balb/c, japan)2016-12-10v4No1 / 227
492amnoncommon skin, adult, rana catesbeiana, bullfrog, lithobates catesbeianus, frog, japan2019-02-27v4No1 / 236
807amnoncommon autumn, normal weather, okinawa islands, japan, filtered 0.2um, near shore, sea water, surface water2021-06-20v3No1 / 240
503amnoncommon mouse, mus musculus, research facility, feces, balb/c, japan2019-03-12v4No1 / 257
550amnon high in patiria pectinifera compared to asterias amurensis in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / 278
550amnoncommon city, hokkaido, sea water, japan2019-08-18v4No1 / 291
807amnonhigher during typhoon with red soil pollution compared to normal weather ( high in storm typhoon compared to normal weather in autumn near shore japan filtered 0.2um surface water okinawa islands sea water )2021-06-20v3No1 / 318
338amnonlower in wild salamanders compared to zoo grown salamanders ( high in zoological garden zoo compared to pond area designated as a nature reserve in skin andrias japonicus japanese giant salamander japan )2018-05-21v4No1 / 334
550amnon high in sea water compared to starfish asterias amurensis coelomic fluid wild in city hokkaido japan 2019-08-18v4No1 / 389
807amnoncommon storm, typhoon, autumn, okinawa islands, japan, filtered 0.2um, near shore, sea water, surface water2021-06-20v3No1 / 447
356amnoncommon in deciduous broad leaved forest top soil in japan (common soil, depth 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 834
807amnoncommon tropical storm, summer, okinawa islands, japan, filtered 0.2um, near shore, sea water, surface water2021-06-20v3No1 / 905
807amnon high in tropical storm compared to normal weather in summer okinawa islands japan filtered 0.2um near shore sea water surface water 2021-06-20v3No1 / 1191

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