Summary for ontology term: japan

Number of annotations with term: 53

Annotations:

common ontology terms
term enrichment score
TermScore
japan0.952381
hokkaido0.415584
starfish0.231884
coelomic fluid0.207792
balb/c0.188235
andrias japonicus0.184615
japanese giant salamander0.184615
mountain0.184615
snow field0.155844
c57bl/60.149378
ph 5.40.131148
asterias amurensis0.131148
patiria pectinifera0.131148
wild0.107383
stress0.104348
topsoil0.103896
skin0.102190
depth 6-7m0.101695
depth 0-10cm0.098765
depth 1-2m0.096774
city0.093385
mus musculus0.093213
forest ecosystem0.089888
LOWER IN stress0.071429
tcr-alpha knockout0.070175
lithobates catesbeianus0.070175
LOWER IN starfish0.070175
LOWER IN coelomic fluid0.070175
LOWER IN patiria pectinifera0.070175
LOWER IN asterias amurensis0.070175
malaria0.070175
LOWER IN malaria0.070175
physopelta0.070175
rana catesbeiana0.067797
bullfrog0.067797
early time points0.065574
LOWER IN late time points0.065574
late time points0.063492
LOWER IN early time points0.063492
midgut0.063492
frog0.059701
LOWER IN sea water0.059701
LOWER IN wild0.057971
research facility0.056943
air0.053333
sea water0.047337
LOWER IN control0.039267
control0.037094
mouse0.036832
LOWER IN snow0.036364
LOWER IN snow covered soil0.036364
non snow covered soil0.036364
snow covered soil0.036364
LOWER IN non snow covered soil0.036364
experimental cerebral malaria0.036364
LOWER IN experimental cerebral malaria0.036364
LOWER IN amphibian larval stage0.036364
LOWER IN pond water0.036364
LOWER IN zoo0.036364
area designated as a nature reserve0.036364
zoo0.036364
LOWER IN area designated as a nature reserve0.036364
LOWER IN depth 1-2m0.036364
LOWER IN depth 6-7m0.036364
LOWER IN balb/c0.035714
amphibian larval stage0.035714
adult0.035608
snow0.035088
LOWER IN c57bl/60.035088
pond water0.035088
LOWER IN zoological garden0.035088
LOWER IN pond0.035088
LOWER IN tadpole0.034483
LOWER IN larval stage0.034483
tadpole0.033898
LOWER IN skin0.033898
pond0.033333
zoological garden0.033333
LOWER IN water0.031250
soil0.031128
larval stage0.030303
LOWER IN winter0.029851
winter0.029412
feces0.028658
summer0.028571
LOWER IN summer0.028571
LOWER IN adult0.028571
water0.020202
Fraction of dbbact annotations with this term covered by the query
TermScore
japan0.909091
stress0.666667
LOWER IN stress0.666667
hokkaido0.666667
tcr-alpha knockout0.500000
ph 5.40.500000
LOWER IN snow0.500000
LOWER IN snow covered soil0.500000
non snow covered soil0.500000
snow covered soil0.500000
LOWER IN non snow covered soil0.500000
lithobates catesbeianus0.500000
starfish0.500000
asterias amurensis0.500000
patiria pectinifera0.500000
LOWER IN starfish0.500000
LOWER IN coelomic fluid0.500000
LOWER IN patiria pectinifera0.500000
LOWER IN asterias amurensis0.500000
experimental cerebral malaria0.500000
malaria0.500000
LOWER IN experimental cerebral malaria0.500000
LOWER IN malaria0.500000
physopelta0.500000
andrias japonicus0.500000
japanese giant salamander0.500000
LOWER IN amphibian larval stage0.500000
LOWER IN pond water0.500000
LOWER IN zoo0.500000
area designated as a nature reserve0.500000
zoo0.500000
LOWER IN area designated as a nature reserve0.500000
mountain0.500000
depth 6-7m0.500000
LOWER IN depth 1-2m0.500000
LOWER IN depth 6-7m0.500000
rana catesbeiana0.333333
bullfrog0.333333
coelomic fluid0.333333
LOWER IN balb/c0.333333
amphibian larval stage0.333333
depth 1-2m0.333333
balb/c0.250000
snow0.250000
LOWER IN c57bl/60.250000
early time points0.250000
LOWER IN late time points0.250000
pond water0.250000
LOWER IN zoological garden0.250000
LOWER IN pond0.250000
snow field0.250000
late time points0.200000
LOWER IN early time points0.200000
midgut0.200000
LOWER IN tadpole0.200000
LOWER IN larval stage0.200000
topsoil0.166667
tadpole0.166667
LOWER IN skin0.166667
depth 0-10cm0.142857
frog0.142857
LOWER IN sea water0.142857
pond0.142857
zoological garden0.142857
c57bl/60.133333
LOWER IN wild0.125000
forest ecosystem0.111111
LOWER IN water0.090909
air0.090909
skin0.083333
wild0.083333
larval stage0.076923
LOWER IN winter0.071429
winter0.066667
summer0.058824
LOWER IN summer0.058824
city0.058824
LOWER IN adult0.058824
mus musculus0.053571
sea water0.034483
research facility0.030928
adult0.025974
LOWER IN control0.024793
control0.024590
water0.021739
mouse0.020408
soil0.019608
feces0.014925
Fraction of annotations for the query sequences containing the term
TermScore
japan1.000000
mus musculus0.358491
research facility0.358491
feces0.358491
hokkaido0.301887
city0.226415
mouse0.188679
c57bl/60.169811
balb/c0.150943
starfish0.150943
coelomic fluid0.150943
wild0.150943
skin0.132075
andrias japonicus0.113208
japanese giant salamander0.113208
snow field0.113208
mountain0.113208
LOWER IN control0.094340
control0.075472
soil0.075472
depth 0-10cm0.075472
topsoil0.075472
ph 5.40.075472
forest ecosystem0.075472
sea water0.075472
asterias amurensis0.075472
patiria pectinifera0.075472
stress0.056604
adult0.056604
depth 6-7m0.056604
depth 1-2m0.056604
tcr-alpha knockout0.037736
LOWER IN stress0.037736
rana catesbeiana0.037736
bullfrog0.037736
lithobates catesbeianus0.037736
frog0.037736
LOWER IN sea water0.037736
LOWER IN starfish0.037736
LOWER IN wild0.037736
LOWER IN coelomic fluid0.037736
LOWER IN patiria pectinifera0.037736
LOWER IN asterias amurensis0.037736
late time points0.037736
LOWER IN early time points0.037736
malaria0.037736
early time points0.037736
LOWER IN late time points0.037736
LOWER IN malaria0.037736
midgut0.037736
physopelta0.037736
air0.037736
LOWER IN snow0.018868
LOWER IN snow covered soil0.018868
non snow covered soil0.018868
summer0.018868
LOWER IN winter0.018868
snow0.018868
snow covered soil0.018868
winter0.018868
LOWER IN non snow covered soil0.018868
LOWER IN summer0.018868
LOWER IN balb/c0.018868
LOWER IN c57bl/60.018868
experimental cerebral malaria0.018868
LOWER IN experimental cerebral malaria0.018868
LOWER IN tadpole0.018868
LOWER IN amphibian larval stage0.018868
LOWER IN larval stage0.018868
amphibian larval stage0.018868
larval stage0.018868
tadpole0.018868
LOWER IN adult0.018868
LOWER IN water0.018868
LOWER IN pond water0.018868
water0.018868
pond water0.018868
LOWER IN skin0.018868
pond0.018868
LOWER IN zoological garden0.018868
LOWER IN zoo0.018868
area designated as a nature reserve0.018868
zoological garden0.018868
zoo0.018868
LOWER IN pond0.018868
LOWER IN area designated as a nature reserve0.018868
LOWER IN depth 1-2m0.018868
LOWER IN depth 6-7m0.018868
Exp. ID User ID Description Date Region Flag Sequences
41amnonlower in water stress compared to control in tcr-b deficient mice ( high in control compared to stress in mus musculus research facility feces tcr-alpha knockout japan )2016-12-10v4No1 / 2
172amnonhighfreq midgut, physopelta, japan2017-07-25v4No1 / 2
41amnonhigher in water stress compared to control in tcr-b deficient mouse ( high in stress compared to control in mus musculus research facility feces tcr-alpha knockout japan )2016-12-10v4No1 / 3
356amnonhigh freq. in deciduous broad leaved forest top soil in japan (highfreq soil, depth 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 3
172amnoncommon midgut, physopelta, japan2017-07-25v4No1 / 3
338amnon high in water pond water compared to skin in andrias japonicus japanese giant salamander japan 2018-05-21v4No1 / 3
287amnon high in depth 6-7m compared to depth 1-2m in snow field mountain japan 2018-01-29v4No1 / 4
550amnonhighfreq city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / 5
550amnon high in starfish wild coelomic fluid asterias amurensis compared to sea water in city hokkaido japan 2019-08-18v4No1 / 5
550amnonhighfreq city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / 6
550amnon high in asterias amurensis compared to patiria pectinifera in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / 7
338amnon high in skin compared to water pond water in andrias japonicus japanese giant salamander japan 2018-05-21v4No1 / 7
92amnoncommon air, japan2017-03-09v4No1 / 9
92amnonhighfreq air, japan2017-03-09v4No1 / 10
287amnon high in depth 1-2m compared to depth 6-7m in snow field mountain japan 2018-01-29v4No1 / 12
42amnonhigher in stressed mice compared to control in balb/c tcr-b deficient mice ( high in stress compared to control in mus musculus research facility feces balb/c japan )2016-12-10v4No1 / 14
42amnonhigher on stressed mice compared to control in c57bl tcr-b deficient mice ( high in stress compared to control in c57bl/6 mus musculus research facility feces japan )2016-12-10v4No1 / 15
550amnoncommon city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / 15
550amnon high in starfish coelomic fluid wild patiria pectinifera compared to sea water in city hokkaido japan 2019-08-18v4No1 / 15
492amnonhighfreq skin, adult, rana catesbeiana, bullfrog, lithobates catesbeianus, frog, japan2019-02-27v4No1 / 16
42amnonhigh freq. in tcr-b deficient c57bl6 mice (highfreq mus musculus, research facility, feces, c57bl/6, japan)2016-12-10v4No1 / 17
503amnonincreases following malaria infection ( high in late time points malaria compared to control early time points in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 17
287amnonhighfreq snow field, mountain, depth 1-2m, japan2018-01-29v4No1 / 17
287amnonhighfreq snow field, mountain, depth 6-7m, japan2018-01-29v4No1 / 18
503amnonhighfreq mouse, mus musculus, research facility, feces, c57bl/6, japan2019-03-12v4No1 / 19
550amnonhighfreq sea water, hokkaido, city, japan2019-08-18v4No1 / 20
503amnon high in c57bl/6 compared to balb/c in mouse mus musculus research facility feces japan 2019-03-12v4No1 / 21
503amnonhighfreq mouse, mus musculus, research facility, feces, balb/c, japan2019-03-12v4No1 / 21
42amnonhigh freq. in tcr-b deficient balb/c mice (highfreq mus musculus, research facility, feces, balb/c, japan)2016-12-10v4No1 / 23
338amnon high in adult compared to tadpole amphibian larval stage larval stage in andrias japonicus japanese giant salamander skin japan 2018-05-21v4No1 / 24
503amnondecreases following malaria infection ( high in control early time points compared to late time points malaria in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 29
287amnoncommon snow field, mountain, depth 1-2m, japan2018-01-29v4No1 / 35
503amnonincreases following malaria infection ( high in late time points experimental cerebral malaria malaria compared to control early time points in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 38
287amnoncommon snow field, mountain, depth 6-7m, japan2018-01-29v4No1 / 47
338amnonhigher in wild salamanders compared to zoo grown salamanders ( high in pond area designated as a nature reserve compared to zoological garden zoo in andrias japonicus japanese giant salamander skin japan )2018-05-21v4No1 / 51
503amnondecreases following malaria infection ( high in control early time points compared to late time points experimental cerebral malaria malaria in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 58
338amnon high in amphibian larval stage larval stage tadpole compared to adult in andrias japonicus japanese giant salamander skin japan 2018-05-21v4No1 / 59
356amnonlower in non-snow covered period ( high in snow snow covered soil winter compared to non snow covered soil summer in soil depth 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )2018-08-15v4No1 / 78
550amnoncommon city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / 85
503amnon high in balb/c compared to c57bl/6 in mouse mus musculus research facility feces japan 2019-03-12v4No1 / 91
42amnonlower on stressed mice compared to control in c57bl tcr-b deficient mice ( high in control compared to stress in c57bl/6 mus musculus research facility feces japan )2016-12-10v4No1 / 108
356amnonhigher in non-snow covered period ( high in non snow covered soil summer compared to snow snow covered soil winter in soil depth 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )2018-08-15v4No1 / 113
550amnon high in sea water compared to starfish wild coelomic fluid patiria pectinifera in city hokkaido japan 2019-08-18v4No1 / 185
42amnoncommon in tcr-b deficient c57bl6 mice (common feces, research facility, mus musculus, c57bl/6, japan)2016-12-10v4No1 / 201
503amnoncommon mouse, mus musculus, research facility, feces, c57bl/6, japan2019-03-12v4No1 / 210
42amnoncommon in tcr-b deficient balb/c mice (common mus musculus, research facility, feces, balb/c, japan)2016-12-10v4No1 / 227
492amnoncommon skin, adult, rana catesbeiana, bullfrog, lithobates catesbeianus, frog, japan2019-02-27v4No1 / 236
503amnoncommon mouse, mus musculus, research facility, feces, balb/c, japan2019-03-12v4No1 / 257
550amnon high in patiria pectinifera compared to asterias amurensis in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / 278
550amnoncommon city, hokkaido, sea water, japan2019-08-18v4No1 / 291
338amnonlower in wild salamanders compared to zoo grown salamanders ( high in zoological garden zoo compared to pond area designated as a nature reserve in skin andrias japonicus japanese giant salamander japan )2018-05-21v4No1 / 334
550amnon high in sea water compared to starfish asterias amurensis coelomic fluid wild in city hokkaido japan 2019-08-18v4No1 / 389
356amnoncommon in deciduous broad leaved forest top soil in japan (common soil, depth 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 834

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