Summary for ontology term: japan

Number of annotations with term: 53

Annotations:

common ontology terms
term enrichment score
TermScore
japan0.952381
hokkaido0.415584
starfish0.231884
coelomic fluid0.207792
balb/c0.188235
andrias japonicus0.184615
japanese giant salamander0.184615
mountain0.169014
snow field0.155844
c57bl/60.138996
ph 5.40.131148
asterias amurensis0.131148
patiria pectinifera0.131148
stress0.104348
depth 6-7m0.101695
depth 1-2m0.096774
topsoil0.094118
depth 0-10cm0.089888
forest ecosystem0.089888
skin0.088608
city0.085409
mus musculus0.085266
wild0.075117
LOWER IN stress0.071429
tcr-alpha knockout0.070175
lithobates catesbeianus0.070175
LOWER IN starfish0.070175
LOWER IN coelomic fluid0.070175
LOWER IN patiria pectinifera0.070175
LOWER IN asterias amurensis0.070175
malaria0.070175
LOWER IN malaria0.070175
physopelta0.070175
rana catesbeiana0.067797
bullfrog0.067797
midgut0.063492
early time points0.061538
LOWER IN late time points0.061538
frog0.057971
late time points0.057971
LOWER IN early time points0.057971
LOWER IN sea water0.054795
LOWER IN wild0.053333
air0.051948
research facility0.044323
sea water0.042328
LOWER IN snow0.036364
LOWER IN snow covered soil0.036364
non snow covered soil0.036364
snow covered soil0.036364
LOWER IN non snow covered soil0.036364
experimental cerebral malaria0.036364
LOWER IN experimental cerebral malaria0.036364
LOWER IN amphibian larval stage0.036364
LOWER IN pond water0.036364
pond0.036364
LOWER IN zoo0.036364
area designated as a nature reserve0.036364
zoo0.036364
LOWER IN area designated as a nature reserve0.036364
LOWER IN depth 1-2m0.036364
LOWER IN depth 6-7m0.036364
LOWER IN balb/c0.035714
amphibian larval stage0.035714
snow0.035088
LOWER IN c57bl/60.035088
LOWER IN pond0.035088
LOWER IN tadpole0.034483
pond water0.034483
LOWER IN larval stage0.033898
tadpole0.033898
LOWER IN zoological garden0.033898
mouse0.033167
LOWER IN skin0.032787
LOWER IN control0.031283
LOWER IN water0.030303
zoological garden0.030303
control0.029888
larval stage0.029851
LOWER IN winter0.029412
winter0.028986
summer0.027397
LOWER IN summer0.027397
LOWER IN adult0.026316
soil0.025237
adult0.022556
feces0.021249
water0.018519
Fraction of dbbact annotations with this term covered by the query
TermScore
japan0.909091
stress0.666667
LOWER IN stress0.666667
hokkaido0.666667
tcr-alpha knockout0.500000
ph 5.40.500000
LOWER IN snow0.500000
LOWER IN snow covered soil0.500000
non snow covered soil0.500000
snow covered soil0.500000
LOWER IN non snow covered soil0.500000
lithobates catesbeianus0.500000
starfish0.500000
asterias amurensis0.500000
patiria pectinifera0.500000
LOWER IN starfish0.500000
LOWER IN coelomic fluid0.500000
LOWER IN patiria pectinifera0.500000
LOWER IN asterias amurensis0.500000
experimental cerebral malaria0.500000
malaria0.500000
LOWER IN experimental cerebral malaria0.500000
LOWER IN malaria0.500000
physopelta0.500000
andrias japonicus0.500000
japanese giant salamander0.500000
LOWER IN amphibian larval stage0.500000
LOWER IN pond water0.500000
pond0.500000
LOWER IN zoo0.500000
area designated as a nature reserve0.500000
zoo0.500000
LOWER IN area designated as a nature reserve0.500000
depth 6-7m0.500000
LOWER IN depth 1-2m0.500000
LOWER IN depth 6-7m0.500000
rana catesbeiana0.333333
bullfrog0.333333
coelomic fluid0.333333
LOWER IN balb/c0.333333
amphibian larval stage0.333333
mountain0.333333
depth 1-2m0.333333
balb/c0.250000
snow0.250000
LOWER IN c57bl/60.250000
LOWER IN pond0.250000
snow field0.250000
midgut0.200000
LOWER IN tadpole0.200000
pond water0.200000
early time points0.166667
LOWER IN late time points0.166667
LOWER IN larval stage0.166667
tadpole0.166667
LOWER IN zoological garden0.166667
topsoil0.125000
frog0.125000
late time points0.125000
LOWER IN early time points0.125000
LOWER IN skin0.125000
c57bl/60.117647
depth 0-10cm0.111111
forest ecosystem0.111111
LOWER IN sea water0.100000
LOWER IN wild0.090909
air0.083333
LOWER IN water0.076923
zoological garden0.076923
larval stage0.071429
LOWER IN winter0.066667
skin0.066667
winter0.062500
city0.052632
summer0.050000
LOWER IN summer0.050000
wild0.050000
mus musculus0.048387
LOWER IN adult0.043478
sea water0.029412
research facility0.023622
LOWER IN control0.018750
control0.018634
mouse0.018182
water0.018182
soil0.015152
adult0.014085
feces0.010949
Fraction of annotations for the query sequences containing the term
TermScore
japan1.000000
mus musculus0.358491
research facility0.358491
feces0.358491
hokkaido0.301887
city0.226415
mouse0.188679
c57bl/60.169811
balb/c0.150943
starfish0.150943
coelomic fluid0.150943
wild0.150943
skin0.132075
andrias japonicus0.113208
japanese giant salamander0.113208
snow field0.113208
mountain0.113208
LOWER IN control0.094340
control0.075472
soil0.075472
depth 0-10cm0.075472
topsoil0.075472
ph 5.40.075472
forest ecosystem0.075472
sea water0.075472
asterias amurensis0.075472
patiria pectinifera0.075472
stress0.056604
adult0.056604
depth 6-7m0.056604
depth 1-2m0.056604
tcr-alpha knockout0.037736
LOWER IN stress0.037736
rana catesbeiana0.037736
bullfrog0.037736
lithobates catesbeianus0.037736
frog0.037736
LOWER IN sea water0.037736
LOWER IN starfish0.037736
LOWER IN wild0.037736
LOWER IN coelomic fluid0.037736
LOWER IN patiria pectinifera0.037736
LOWER IN asterias amurensis0.037736
late time points0.037736
LOWER IN early time points0.037736
malaria0.037736
early time points0.037736
LOWER IN late time points0.037736
LOWER IN malaria0.037736
midgut0.037736
physopelta0.037736
air0.037736
LOWER IN snow0.018868
LOWER IN snow covered soil0.018868
non snow covered soil0.018868
summer0.018868
LOWER IN winter0.018868
snow0.018868
snow covered soil0.018868
winter0.018868
LOWER IN non snow covered soil0.018868
LOWER IN summer0.018868
LOWER IN balb/c0.018868
LOWER IN c57bl/60.018868
experimental cerebral malaria0.018868
LOWER IN experimental cerebral malaria0.018868
LOWER IN tadpole0.018868
LOWER IN amphibian larval stage0.018868
LOWER IN larval stage0.018868
amphibian larval stage0.018868
larval stage0.018868
tadpole0.018868
LOWER IN adult0.018868
LOWER IN water0.018868
LOWER IN pond water0.018868
water0.018868
pond water0.018868
LOWER IN skin0.018868
pond0.018868
LOWER IN zoological garden0.018868
LOWER IN zoo0.018868
area designated as a nature reserve0.018868
zoological garden0.018868
zoo0.018868
LOWER IN pond0.018868
LOWER IN area designated as a nature reserve0.018868
LOWER IN depth 1-2m0.018868
LOWER IN depth 6-7m0.018868
Exp. ID User ID Description Date Region Flag Sequences
41amnonlower in water stress compared to control in tcr-b deficient mice ( high in control compared to stress in mus musculus research facility feces tcr-alpha knockout japan )2016-12-10v4No1 / -6
172amnondominant midgut, physopelta, japan2017-07-25v4No1 / -6
41amnonhigher in water stress compared to control in tcr-b deficient mouse ( high in stress compared to control in mus musculus research facility feces tcr-alpha knockout japan )2016-12-10v4No1 / -5
356amnonhigh freq. in deciduous broad leaved forest top soil in japan (dominant soil, depth 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / -5
172amnoncommon midgut, physopelta, japan2017-07-25v4No1 / -5
338amnon high in water pond water compared to skin in andrias japonicus japanese giant salamander japan 2018-05-21v4No1 / -5
287amnon high in depth 6-7m compared to depth 1-2m in snow field mountain japan 2018-01-29v4No1 / -4
550amnondominant city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / -3
550amnon high in starfish wild coelomic fluid asterias amurensis compared to sea water in city hokkaido japan 2019-08-18v4No1 / -3
550amnondominant city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / -2
550amnon high in asterias amurensis compared to patiria pectinifera in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / -1
338amnon high in skin compared to water pond water in andrias japonicus japanese giant salamander japan 2018-05-21v4No1 / -1
92amnoncommon air, japan2017-03-09v4No1 / 1
92amnondominant air, japan2017-03-09v4No1 / 2
287amnon high in depth 1-2m compared to depth 6-7m in snow field mountain japan 2018-01-29v4No1 / 4
42amnonhigher in stressed mice compared to control in balb/c tcr-b deficient mice ( high in stress compared to control in mus musculus research facility feces balb/c japan )2016-12-10v4No1 / 6
42amnonhigher on stressed mice compared to control in c57bl tcr-b deficient mice ( high in stress compared to control in c57bl/6 mus musculus research facility feces japan )2016-12-10v4No1 / 7
550amnoncommon city, hokkaido, starfish, asterias amurensis, coelomic fluid, wild, japan2019-08-18v4No1 / 7
550amnon high in starfish coelomic fluid wild patiria pectinifera compared to sea water in city hokkaido japan 2019-08-18v4No1 / 7
492amnondominant skin, adult, rana catesbeiana, bullfrog, lithobates catesbeianus, frog, japan2019-02-27v4No1 / 8
42amnonhigh freq. in tcr-b deficient c57bl6 mice (dominant mus musculus, research facility, feces, c57bl/6, japan)2016-12-10v4No1 / 9
503amnonincreases following malaria infection ( high in late time points malaria compared to control early time points in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 9
287amnondominant snow field, mountain, depth 1-2m, japan2018-01-29v4No1 / 9
287amnondominant snow field, mountain, depth 6-7m, japan2018-01-29v4No1 / 10
503amnondominant mouse, mus musculus, research facility, feces, c57bl/6, japan2019-03-12v4No1 / 11
550amnondominant sea water, hokkaido, city, japan2019-08-18v4No1 / 12
503amnon high in c57bl/6 compared to balb/c in mouse mus musculus research facility feces japan 2019-03-12v4No1 / 13
503amnondominant mouse, mus musculus, research facility, feces, balb/c, japan2019-03-12v4No1 / 13
42amnonhigh freq. in tcr-b deficient balb/c mice (dominant mus musculus, research facility, feces, balb/c, japan)2016-12-10v4No1 / 15
338amnon high in adult compared to tadpole amphibian larval stage larval stage in andrias japonicus japanese giant salamander skin japan 2018-05-21v4No1 / 16
503amnondecreases following malaria infection ( high in control early time points compared to late time points malaria in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 21
287amnoncommon snow field, mountain, depth 1-2m, japan2018-01-29v4No1 / 27
503amnonincreases following malaria infection ( high in late time points experimental cerebral malaria malaria compared to control early time points in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 30
287amnoncommon snow field, mountain, depth 6-7m, japan2018-01-29v4No1 / 39
338amnonhigher in wild salamanders compared to zoo grown salamanders ( high in pond area designated as a nature reserve compared to zoological garden zoo in andrias japonicus japanese giant salamander skin japan )2018-05-21v4No1 / 43
503amnondecreases following malaria infection ( high in control early time points compared to late time points experimental cerebral malaria malaria in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 50
338amnon high in amphibian larval stage larval stage tadpole compared to adult in andrias japonicus japanese giant salamander skin japan 2018-05-21v4No1 / 51
356amnonlower in non-snow covered period ( high in snow snow covered soil winter compared to non snow covered soil summer in soil depth 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )2018-08-15v4No1 / 70
550amnoncommon city, hokkaido, starfish, coelomic fluid, wild, patiria pectinifera, japan2019-08-18v4No1 / 77
503amnon high in balb/c compared to c57bl/6 in mouse mus musculus research facility feces japan 2019-03-12v4No1 / 83
42amnonlower on stressed mice compared to control in c57bl tcr-b deficient mice ( high in control compared to stress in c57bl/6 mus musculus research facility feces japan )2016-12-10v4No1 / 100
356amnonhigher in non-snow covered period ( high in non snow covered soil summer compared to snow snow covered soil winter in soil depth 0-10cm hokkaido topsoil ph 5.4 forest ecosystem japan )2018-08-15v4No1 / 105
550amnon high in sea water compared to starfish wild coelomic fluid patiria pectinifera in city hokkaido japan 2019-08-18v4No1 / 177
42amnoncommon in tcr-b deficient c57bl6 mice (common feces, research facility, mus musculus, c57bl/6, japan)2016-12-10v4No1 / 193
503amnoncommon mouse, mus musculus, research facility, feces, c57bl/6, japan2019-03-12v4No1 / 202
42amnoncommon in tcr-b deficient balb/c mice (common mus musculus, research facility, feces, balb/c, japan)2016-12-10v4No1 / 219
492amnoncommon skin, adult, rana catesbeiana, bullfrog, lithobates catesbeianus, frog, japan2019-02-27v4No1 / 228
503amnoncommon mouse, mus musculus, research facility, feces, balb/c, japan2019-03-12v4No1 / 249
550amnon high in patiria pectinifera compared to asterias amurensis in city hokkaido starfish coelomic fluid wild japan 2019-08-18v4No1 / 270
550amnoncommon city, hokkaido, sea water, japan2019-08-18v4No1 / 283
338amnonlower in wild salamanders compared to zoo grown salamanders ( high in zoological garden zoo compared to pond area designated as a nature reserve in skin andrias japonicus japanese giant salamander japan )2018-05-21v4No1 / 326
550amnon high in sea water compared to starfish asterias amurensis coelomic fluid wild in city hokkaido japan 2019-08-18v4No1 / 381
356amnoncommon in deciduous broad leaved forest top soil in japan (common soil, depth 0-10cm, hokkaido, topsoil, ph 5.4, japan, forest ecosystem)2018-08-15v4No1 / 826

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