Summary for ontology term: jejunum

Number of annotations with term: 29

Top positive-associated sequence

Taxonomy Sequence Recall
TGACAAAAATTAAGCCATAAACAAAAGTTTGACTAAGCCATATTGACTAGGGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAGCTAACAGGAACACGGCGTAAAACGTGTTAAAGCACTACATCAAATAGAGTTA0.208333
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__StreptococcusTAGGGAATCTTCGGCAATGGGGGCAACCCTGACCGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAGCTCTGTTGTAAGAGAAGAACGTGTGTGAGAGTGGAAAGTTCACACAGTGACGGTAACTTACCAGAAAGGGACGG0.166667
d__BacteriaTGACAAAAATTAAGCCATAAACGAAAGTTTGACTAAGTTATATTGACTAGGGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCGAGCTAACAGGAATACGGCATAAAACGTGTGAAAGCGCTACATCAAATAGAGTTA0.166667
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Actinomycetales;f__Propionibacteriaceae;g__PropionibacteriumTGGGGAATATTGCACAATGGGCGGAAGCCTGATGCAGCAACGCCGCGTGCGGGATGACGGCCTTCGGGTTGTAAACCGCTTTCGCCTGTGACGAAGCGTGAGTGACGGTAATGGGTAAAGAAGCACCGGCTAACTACGTGCCAGCAGCCG0.125000
d__Bacteria;p__"Proteobacteria";c__Epsilonproteobacteria;o__Campylobacterales;f__Campylobacteraceae;g__CampylobacterTAGGGAATATTGCGCAATGGGGGAAACCCTGACGCAGCAACGCCGCGTGGAGGATGACACTTTTCGGAGCGTAAACTCCTTTTCTTAGGGAAGAATTCTGACGGTACCTAAGGAATAAGCACCGGCTAACTCCGTGCCAGCAGCCGCGGT0.125000
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Coriobacteriales;f__Coriobacteriaceae;g__OlsenellaTGGGGAATCTTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGCGGGACGAAGGCCTTCGGGTTGTAAACCGCTTTCAGCAGGGACGAGGCCGCAAGGTGACGGTACCTGCAGAAGAAGCCCCGGCTAACTACGTGCCAGCAGC0.125000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Enterococcaceae;g__EnterococcusTAGGGAATCTTCGGCAATGGACGAAAGTCTGACCGAGCAACGCCGCGTGAGTGAAGAAGGTTTTCGGATCGTAAAACTCTGTTGTTAGAGAAGAACAAGGATGAGAGTAACTGTTCATCCCTTGACGGTATCTAACCAGAAAGCCACGGC0.125000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae 1TGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCAACGCCGCGTGAGTGATGACGGCCTTCGGGTTGTAAAGCTCTGTCTTCAGGGACGATAATGACGGTACCTGAGGAGGAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTA0.125000
d__Archaea;p__"Euryarchaeota";c__Methanobacteria;o__Methanobacteriales;f__Methanobacteriaceae;g__MethanobrevibacterGCGCGAAACCTCCGCAATGTGAGAAATCGCGACGGGGGGATCCCAAGTGCCATTCTTAACGGGATGGCTTTTCATTAGTGTAAAGAGCTTTTGGAATAAGAGCTGGGCAAGACCGGTGCCAGCCGCCGCGGTAACACCGGCAGCTCTAGT0.125000
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGAATATTGGGCAATGGGCGCAAGCCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCTTTCGGGTTGTAAACTTCTTTTATGAGGGACGAAGAACGTGACGGTACCTCATGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCG0.125000

Top negative-associated sequence

Taxonomy Sequence Recall
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__LachnospiraceaeTGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCGACGCCGCGTGAGTGAAGAAGTATTTCGGTATGTAAAGCTCTATCAGCAGGGAAGAAAATGACGGTACCTGACTAAGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTA0.571429
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiaceae 1TGGGGAATATTGCACAATGGGGGAAACCCTGATGCAGCAATGCCGCGTGAGTGATGACGGCCTTCGGGTTGTAAAGCTCTGTCTTCAGGGACGATAATGACGGTACCTGAGGAGGAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTA0.428571
d__Bacteria;p__"Proteobacteria";c__Deltaproteobacteria;o__Desulfovibrionales;f__Desulfovibrionaceae;g__DesulfovibrioTGGGGAATATTGCGCAATGGGCGAAAGCCTGACGCAGCGACGCCGCGTGAGGGATGAAGGTCTTCGGATCGTAAACCTCTGTCAGAAGGGAAGAAACTAGGGTGCTCTAATCATCATCCTACTGACGGTACCTTCAAAGGAAGCACCGGC0.428571
d__BacteriaTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCGACGCCGCGTGAGGGAAGAAGGTCTTCGGATTGTAAACCTCTTTCAGCAGGGAAGAAGCAAGTGACGGTACCTGCAGAAGAAGTCACGGCTAACTACGTGCCAGCAGCCGCG0.428571
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGAATATTGGGCAATGGACGCAAGTCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCTTTCGGGTTGTAAACTTCTTTGACAGGGGAAGAGCAGAAGACGGTACCCTGAAAACAAGCCACGGCTAACTACGTGCCAGCAGCCGCGG0.428571
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Peptostreptococcaceae;g__RomboutsiaTGGGGAATATTGCACAATGGGCGAAAGCCTGATGCAGCAACGCCGCGTGAGCGATGAAGGCCTTCGGGTCGTAAAGCTCTGTCCTCAAGGAAGATAATGACGGTACTTGAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCGGTA0.428571
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGGATATTGCACAATGGAGGAAACTCTGATGCAGCAACGCCGCGTGAGGGAAGAAGGTTTTCGGATTGTAAACCTCTGTTTTTAGTGAAGAAACAAATGACGGTAGCTAAAGAGGAAGCCACGGCTAACTACGTGCCAGCAGCCGCG0.428571
d__BacteriaTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCAACGCCGCGTGAGGGAAGAAGGTTTTCGGATTGTAAACCTCTGTCCTTGGTGACGAAGGAAGTGACGGTAGCCAAGGAGGAAGCCCCGGCTAACTACGTGCCAGCAGCCGCG0.428571
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__PseudoflavonifractorTGGGGAATATTGGGCAATGGGCGCAAGCCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCTTTCGGGTTGTAAACTTCTTTTATCAGGGACGATAATGACGGTACCTGATGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCGGTA0.428571
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Ruminococcaceae;g__OscillibacterTGGGGAATATTGGGCAATGGACGCAAGTCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGCTTTCGGGTTGTAAACTTCTTTTAAGGGGGAAGAGCAGAAGACGGTACCCCTTGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCGG0.428571

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
TGACAAAAATTAAGCCATAAACAAAAGTTTGACTAAGCCATATTGACTAGGGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCAAGCTAACAGGAACACGGCGTAAAACGTGTTAAAGCACTACATCAAATAGAGTTA0.400000
d__BacteriaTGACAAAAATTAAGCCATAAACGAAAGTTTGACTAAGTTATATTGACTAGGGTTGGTAAATCTCGTGCCAGCCACCGCGGTCATACGATTAACCCGAGCTAACAGGAATACGGCATAAAACGTGTGAAAGCGCTACATCAAATAGAGTTA0.342857
d__BacteriaTGACAAAAATTAAGCTAGAAACAAAAATTCAACTAAGTTATACTAACAGGGTTGGTAAATCTCATACCAGCCACTGTGGTCATAATGATTAACCCAAATTAACAGAAATATGGTGTAAAGCATATTAAAGAGTAATATAAAACAAAGTTT0.275862
TGACAAAAATTAAGCCATAAATGAAAGTTTGACTAAGCCATATTGACTAGGGTTGGTAAATCTCGTGCCAGCCACCACGGTCATACAATTAACCCGAGCTAACAGGAACACGGCGTAAAACGTGTTAAAGCACTACATCAAATAGAGTTA0.275862
AGAGTGAGATGGTTGGATGGCATCACCAAATCAATGGACATGAATTTGAGCAAACTCTGGATAATAATGAAGGATTAGATACCCTAGTAGTCGACTACTAGGGTATCTAATCCTTCATTATTATCCAGAGTTTGCTCAAATTCATGTCCA0.275862
d__BacteriaTCCAGTGGGTTGCAAAGAATCAAACATGACTGAGTAACTGAACAATAACAGTACGTACCACATGCCAAGGACATTAGGCATACTAACTCAGTTAATCCACATACAATTTAACACACACATTACCATCTTCATCCTTCCTGGTTTACAGAT0.275862
d__BacteriaAGAGTGAGATGGTTGGATGGCATCACCAAATCAATGGACATGAATTTGAGCAAACTCTGGATAATAATGAAGGATTAGATACCCTTGTAGTCGACTACAAGGGTATCTAATCCTTCATTATTATCCAGAGTTTGCTCAAATTCATGTCCA0.275862
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Coriobacteriales;f__CoriobacteriaceaeTGGGGAATCTTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGCGGGATGAAGGCCTTCGGGTTGTAAACCGCTTTCAGTGGGGACGAGGCCGCGAGGTGACGGTACCCACAGAAGAAGCCCCGGCTAACTACGTGCCAGCAGC0.263158
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__RuminococcaceaeTGGGGAATATTGGGCAATGGGCGAAAGCCTGACCCAGCAACGCCGCGTGAAGGAAGAAGGTCTTCGGATTGTAAACTTCTTTTATGAGGGACGAAGGATGTGACGGTACCTCATGAATAAGCCACGGCTAACTACGTGCCAGCAGCCGCG0.258065
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Coriobacteriales;f__Coriobacteriaceae;g__OlsenellaTGGGGAATCTTGCACAATGGGCGAAAGCCTGATGCAGCGACGCCGCGTGCGGGACGAAGGCCTTCGGGTTGTAAACCGCTTTCAGCAGGGACGAGGCCGCGAGGTGACGGTACCTGCAGAAGAAGCCCCGGCTAACTACGTGCCAGCAGC0.256410

Annotations:

common ontology terms
term enrichment score
TermScore
jejunum0.847584
LOWER IN jejunum0.535714
western australia0.432432
duodenum0.392157
LOWER IN duodenum0.315315
sheep0.282828
ileum0.276923
age 1 year0.262295
ovis aries0.247788
edmonton0.242424
canis latrans0.242424
new zealand0.226415
lamb0.226415
LOWER IN ileum0.226415
jinzhou city prefecture0.216216
age 6 weeks0.203390
LOWER IN left colon0.171429
LOWER IN right colon0.164384
LOWER IN caecum0.135135
adult organism0.131148
small intestine0.127660
colon0.125000
LOWER IN colon0.125000
caecum0.123077
left colon0.121212
right colon0.117647
gastrointestinal system0.093023
sus scrofa0.091743
pig0.091743
chicken0.086022
gallus gallus0.082474
australia0.075117
united kingdom0.069444
descending colon0.066667
LOWER IN descending colon0.066667
LOWER IN abomasum0.064516
abomasum0.064516
ascending colon0.064516
LOWER IN ascending colon0.064516
LOWER IN transverse colon0.064516
transverse colon0.064516
wild0.064000
canada0.062016
LOWER IN small intestine0.057143
male0.049689
anatomical space0.049383
stomach0.043478
LOWER IN stomach0.043478
LOWER IN rumen0.040816
rumen0.040816
research facility0.039517
mus musculus0.025806
LOWER IN feces0.017493
feces0.017493
china0.011158
united states of america0.007648
coyote0.000000
Fraction of dbbact annotations with this term covered by the query
TermScore
jejunum1.200000
LOWER IN jejunum1.200000
western australia1.000000
edmonton1.000000
canis latrans1.000000
descending colon1.000000
LOWER IN descending colon1.000000
colon0.666667
LOWER IN colon0.666667
LOWER IN abomasum0.500000
abomasum0.500000
ascending colon0.500000
LOWER IN ascending colon0.500000
LOWER IN transverse colon0.500000
LOWER IN left colon0.500000
transverse colon0.500000
left colon0.500000
jinzhou city prefecture0.500000
duodenum0.454545
LOWER IN duodenum0.454545
LOWER IN right colon0.400000
right colon0.400000
new zealand0.250000
lamb0.250000
LOWER IN ileum0.250000
ileum0.250000
age 1 year0.250000
sheep0.200000
age 6 weeks0.200000
ovis aries0.166667
small intestine0.166667
LOWER IN small intestine0.166667
gastrointestinal system0.142857
adult organism0.125000
LOWER IN caecum0.111111
caecum0.111111
chicken0.062500
sus scrofa0.062500
pig0.062500
stomach0.058824
LOWER IN stomach0.058824
gallus gallus0.058824
LOWER IN rumen0.050000
rumen0.050000
australia0.043478
united kingdom0.043478
wild0.041667
canada0.040000
anatomical space0.038462
male0.030303
research facility0.020408
mus musculus0.015873
LOWER IN feces0.009554
feces0.009554
china0.005814
united states of america0.004049
coyote0.000000
Fraction of annotations for the query sequences containing the term
TermScore
jejunum0.655172
research facility0.620690
ovis aries0.482759
sheep0.482759
duodenum0.344828
LOWER IN jejunum0.344828
ileum0.310345
australia0.275862
age 1 year0.275862
western australia0.275862
LOWER IN duodenum0.241379
new zealand0.206897
lamb0.206897
age 6 weeks0.206897
LOWER IN ileum0.206897
LOWER IN caecum0.172414
sus scrofa0.172414
pig0.172414
united kingdom0.172414
caecum0.137931
male0.137931
canada0.137931
wild0.137931
adult organism0.137931
edmonton0.137931
canis latrans0.137931
coyote0.137931
gallus gallus0.137931
chicken0.137931
china0.137931
jinzhou city prefecture0.137931
LOWER IN feces0.103448
feces0.103448
LOWER IN left colon0.103448
LOWER IN right colon0.103448
small intestine0.103448
colon0.068966
LOWER IN colon0.068966
anatomical space0.068966
united states of america0.068966
gastrointestinal system0.068966
mus musculus0.068966
left colon0.068966
right colon0.068966
LOWER IN abomasum0.034483
LOWER IN rumen0.034483
abomasum0.034483
rumen0.034483
ascending colon0.034483
descending colon0.034483
LOWER IN ascending colon0.034483
LOWER IN descending colon0.034483
stomach0.034483
LOWER IN transverse colon0.034483
transverse colon0.034483
LOWER IN stomach0.034483
LOWER IN small intestine0.034483
Exp. ID User ID Description Date Region Flag Sequences
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to caecum duodenum jejunum left colon right colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 1
649amnondominant research facility, jejunum, ovis aries, new zealand, sheep, lamb, age 6 weeks2020-09-07v3No1 / 6
905amnondominant research facility, jejunum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v3No1 / 9
780amnondominant research facility, small intestine, duodenum, jejunum, gallus gallus, chicken, china, jinzhou city prefecture2021-04-28v3No1 / 10
256amnondominant duodenum, jejunum, ileum, sus scrofa, pig, united kingdom2017-11-26v4No1 / 10
898amnondominant jejunum, male, canada, wild, anatomical space, adult organism, edmonton, canis latrans, coyote2022-04-19v4No1 / 11
898amnon high in duodenum jejunum compared to feces ascending colon descending colon in male canada wild adult organism edmonton canis latrans coyote 2022-04-19v4No1 / 11
898amnoncommon jejunum, male, canada, wild, anatomical space, adult organism, edmonton, canis latrans, coyote2022-04-19v4No1 / 15
649amnon high in duodenum jejunum compared to ileum in research facility ovis aries new zealand sheep lamb age 6 weeks 2020-09-07v3No1 / 18
905amnon high in jejunum compared to ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v3No1 / 32
649amnoncommon research facility, jejunum, ovis aries, new zealand, sheep, lamb, age 6 weeks2020-09-07v3No1 / 38
14amnon high in stomach duodenum jejunum ileum compared to feces caecum transverse colon left colon right colon in united states of america gastrointestinal system mus musculus 2016-11-08v4No1 / 42
14amnon high in feces caecum transverse colon left colon right colon compared to stomach duodenum jejunum ileum in united states of america gastrointestinal system mus musculus 2016-11-08v4No1 / 51
905amnon high in ileum compared to jejunum in research facility ovis aries australia age 1 year sheep western australia 2022-05-19v3No1 / 61
898amnon high in feces ascending colon descending colon compared to duodenum jejunum in male canada wild adult organism edmonton canis latrans coyote 2022-04-19v4No1 / 78
649amnon high in ileum compared to duodenum jejunum in research facility ovis aries new zealand sheep lamb age 6 weeks 2020-09-07v3No1 / 92
905amnoncommon research facility, jejunum, ovis aries, australia, age 1 year, sheep, western australia2022-05-18v3No1 / 114
780amnon high in small intestine duodenum jejunum compared to caecum in research facility gallus gallus chicken china jinzhou city prefecture 2021-04-28v3No1 / 153
780amnon high in caecum compared to small intestine duodenum jejunum in research facility gallus gallus chicken china jinzhou city prefecture 2021-04-28v3No1 / 212
780amnoncommon research facility, small intestine, duodenum, jejunum, gallus gallus, chicken, china, jinzhou city prefecture2021-04-28v3No1 / 232
649amnon high in duodenum jejunum compared to colon in research facility ovis aries new zealand sheep lamb age 6 weeks 2020-09-07v3No1 / 295
256amnoncommon duodenum, jejunum, ileum, sus scrofa, pig, united kingdom2017-11-26v4No1 / 380
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum left colon right colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 387
905amnon high in jejunum ileum compared to abomasum rumen in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v3No1 / 563
256amnonlower in small intestine compared to colon in pigs ( high in caecum left colon right colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-26v4No1 / 740
905amnon high in jejunum ileum compared to feces caecum colon in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v3No1 / 1092
649amnon high in colon compared to duodenum jejunum in research facility ovis aries new zealand sheep lamb age 6 weeks 2020-09-07v3No1 / 1261
905amnon high in abomasum rumen compared to jejunum ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v3No1 / 2033
905amnon high in feces caecum colon compared to jejunum ileum in research facility ovis aries australia age 1 year sheep western australia 2022-05-18v3No1 / 2246

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