Summary for ontology term: kingdom of norway

Number of annotations with term: 30

Top positive-associated sequence

Taxonomy Sequence Recall
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__StreptococcusTACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGT0.033333
d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Bacillales_Incertae Sedis XI;g__GemellaTACGTAGGTGGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGCGCGCGCAGGTGGTTTAATAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGTTAAACTTGAGTGCAGGAGAGAAAAGTGGAATTCCTAG0.033333
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__ActinomycesTACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGCTGGTCGCGTCTGTCGTGAAATCCTCTGGCTTAACTGGGGGCTTGCGGTGGGTACGGGCCGGCTTGAGTGCGGTAGGGGAGACTGGAACTCCTGG0.033333
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Aerococcaceae;g__AbiotrophiaTACGTAGGTGGCGAGCGTTGTCCGGATTTATTGGGCGTAAAGGGAGTGTAGGCGGTCTTTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGGAGACTTGAGTGCAGAAGAGGAGAGCGGAATTCCATG0.033333
d__Bacteria;p__Firmicutes;c__Bacilli;o__Bacillales;f__Staphylococcaceae;g__StaphylococcusTACGTAGGTGGCAAGCGTTATCCGGAATTATTGGGCGTAAAGCGCGCGTAGGCGGTTTTTTAAGTCTGATGTGAAAGCCCACGGCTCAACCGTGGAGGGTCATTGGAAACTGGAAAACTTGAGTGCAGAAGAGGAAAGTGGAATTCCATG0.033333
d__BacteriaTACGTAGAAGACTAGTGTTATTCATCTTTAGTAGGTTTAAAGGGTACCTAGACGGTATAATTAGTCTTAAATAGGATACGGTTATACTAGAGTTATATCTGAGAAGGGGAGTATTCATGGAGTAGAGTTGAAATTCTTTGATACCATGAG0.033333
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Actinomycetales;f__Corynebacteriaceae;g__CorynebacteriumTACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTAGGTGGTTTGTCGCGTCGTTTGTGGAATACCGCAGCTTAACTGCGGGGTTGCAGGCGATACGGGCATAACTTGAGTGCTGTAGGGGAGACTGGAATTCCTG0.033333
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__StreptococcusTACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTATGCTTTGGAAACTGTTTAACTTGAGTGCAGAAGGGGAGAGTGGAATTCCATGT0.033333
d__Bacteria;p__Firmicutes;c__Clostridia;o__Clostridiales;f__Clostridiales_Incertae Sedis XI;g__FinegoldiaTACGTATGGAGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGGGTACGCAGGCGGTTTAATAAGTCGAATGTTAAAGATCGGGGCTCAACCCCGTAAAGCATTGGAAACTGATAAACTTGAGTAGTGGAGAGGAAAGTGGAATTCCTAGT0.033333
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Actinomycetales;f__Corynebacteriaceae;g__CorynebacteriumTACGTAGGGTGCGAGCGTTGTCCGGAATTACTGGGCGTAAAGAGCTCGTAGGTGGTTTGTCGCGTCGTTTGTGTAAGCCCGCAGCTTAACTGCGGGACTGCAGGCGATACGGGCATAACTTGAGTGCTGTAGGGGAGACTGGAATTCCTG0.033333

Top negative-associated sequence

Taxonomy Sequence Recall
d__Bacteria;p__"Bacteroidetes";c__Sphingobacteriia;o__"Sphingobacteriales";f__Sphingobacteriaceae;g__PedobacterTACGGAGGATCCAAGCGTTATCCGGATTTATTGGGTTTAAAGGGTGCGTAGGCGGCCTGTTAAGTCAGAGGTGAAAGACGGTAGCTCAACTATCGCAGTGCCTTTGATACTGATGGGCTTGAATAAACTAGAGGTAGGCGGAATGAGACA0.500000
d__BacteriaGACGGTAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACCTAGACGGTATATCAAGCCCCAAAAGGGAACGGATATTACTAGAGTTTTATGTGAGAGGTTTATTTTAGTACTATCGGAGTAGAGATGAAATTCTTTGATACT0.500000
d__BacteriaTACGTAGAAGACTAGTGTTATTCATCTTTATTAGGTTTAAAGGGTACCTAGACGGTAAAATTAATCTTAAATAGGATATGTTTTTACTAGAGTTATATACGAGGAGGTGAGTATTTATGGAGTAGAGTTGAAATTCGTTGATACCATAAC0.500000
d__BacteriaTACGTAGAAGACAAGTGTTATTCATCTTTAACAGGTTTAAAGGGTACCTAGACGGAAAATCAAGCCTTAGTAGGGACTAATTTTCTAGAGTTTTATGTGTGAAGATCGAATGACCTGAAGAGCAATAAAATGCATTGATACAGGGAAGAC0.500000
d__BacteriaTACGTAAAAGACGAGTGTTATTCATCTTTAATCGGTTTAAAGGGTACCTAGACGGAAAATCAAGCTTAATTAAACTAAGGACTAGTTTTCTAGAGTTTGACATGAGAAGGTACGAACTATCAGAGGAGAGATAAAATTTGTTGATACTGG0.500000
d__BacteriaGACGGTAAAGACTAGTGTTATTCATCTTTAATAGGTTTAAAGGGTACCTAGACGGTGGATCTTGCCCCTAAAAGGAACGGATCTTACTAGAGTTTTATGGAAGAGGTTAGATTTAGTATTAACGGTGGAGAGATGAAATTCTTTGATACT0.500000
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__MethylobacteriumTACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTAGGCGGCCATTCAAGTCGGGGGTGAAAGCCTGTGGCTCAACCACAGAATTGCCTTCGATACTGTTTGGCTTGAGACCGGAAGAGGTAAGTGGAACTGCGAG0.500000
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhodospirillales;f__AcetobacteraceaeTACGAAGGGGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTAGGCGGAGATATCAGTCAGATGTGAAATTCCTGGGCTTAACCTGGGGGCTGCATTTGAGACGGTATTTCTAGAGTGTGAAAGAGGGTCGTGGAATTCCCAG0.500000
d__BacteriaCACGTAGAAGACTAGTGTTATTCATCTTTATTAGGTTTAAAGGGTACCTAGACGGAAAATCAAGCCATAATAGGGACTAATTTTCTAGAGTTTTATGAGAGAAGGAGCGAATTACCGGTGGAGAGTTGATATTTTGTGATACCGGTAGGA0.500000
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhizobiales;f__Methylobacteriaceae;g__MethylobacteriumTACGAAGGGGGCTAGCGTTGCTCGGAATCACTGGGCGTAAAGGGCGCGTAGGCGGCCTTGTAAGTTGGGGGTGAAAGCCCGTGGCTCAACCACGGAATTGCCTTCGATACTGCTTGGCTTGAGTGTGGTAGAGGTTGGTGGAACTGCGAG0.500000

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Actinomycetales;f__IntrasporangiaceaeTACGTAGGGTGCAAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTTGTAGGTGGTTTGTCGCGTCTGTTGTGAAATTTCGGGGCTCAACCCCGAACTTGCAGTGGATACGGGCAGACTAGAGTGTGGTAGGGGAGACTGGAATTCCTGG0.390244
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhizobiales;f__Xanthobacteraceae;g__PseudolabrysTACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGCTTCTTAAGTCGGTGGTGAAATCCTGGAGCTCAACTCCAGAACTGCCTTCGATACTGAGAAGCTCGAGTTCGGGAGAGGTGAGTGGAACTGCGAG0.390244
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__SolirubrobacteralesTACGTAGGGGGCAAGCGTTGTCCGGAATCATTGGGCGTAAAGAGCGTGTAGGTGGCTCGGTAAGTCCGCTGTGAAAGTCCAGGGCTCAACCCTGGAATGCCGGTGGATACTGTCGAGCTAGAGTCCGGAAGAGGCGAGTGGAATTCCTGG0.324324
d__Bacteria;p__"Acidobacteria";c__Acidobacteria_Gp16;g__Gp16TACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCGCGCAGGCGGTCGATTAAGTCGAATGTGAAAGCCCCCGGCTCAACTGGGGAGGGTCATTCGATACTGATCGACTTGAAGGCAGGAGAGGGAAGTGGAATTCCCGG0.324324
d__Bacteria;p__"Verrucomicrobia";c__Spartobacteria;g__Spartobacteria_genera_incertae_sedisTACAGAGGTCTCAAGCGTTGTTCGGATTCATTGGGCGTAAAGGGTGCGTAGGTGGCGCCGTTAGTCAGGTGTGAAATCTCGGGGCTTAACTCCGAAACTGCATTTGATACTGCGGTGCTTGAGGACTGGAGAGGAGACTGGAATTCATGG0.324324
d__Bacteria;p__"Actinobacteria";c__ActinobacteriaTACGTAGGGGGCAAGCGTTGTCCGGATTTATTGGGCGTAAAGAGCGTGTAGGCGGTCAGATAGGTCCGTTGTGAAAACTCGAGGCTCAACCTCGAGACGCCGATGGAAACCATCTGACTAGAGTCCGGAAGAGGAGAGTGGAATTCCTGG0.277778
d__BacteriaTACGTACGAGGCGAGCGTTATCCGGAATTACTGGGCGTAAAGCGCGCGCAGGTGGCTTTTTAAGTAGGGCGTGAAATCTCCCGGCCTAACTGGGAGGGGTCGCCCTAGACTGGGGAGCTTGAGGCTGGCAGAGGTAGGTGGAATTCCTGG0.277778
d__Bacteria;p__"Actinobacteria"TACGTAGGGGGCAAGCGTTGTCCGGAATCATTGGGCGTAAAGAGCGTGTAGGCGGTCCGATAAGTCGGTTGTGAAAGTCAAGGGCTCAACCCTTGAATGCCGACCGATACTGTCGGGCTAGAGTCCGGAAGAGGCGAGTGGAATTCCTGG0.270270
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__RhizobialesTACGGAGGGGGCTAGCGTTGTTCGGAATTACTGGGCGTAAAGCGCACGTAGGCGGACTTGTAAGTCAGGGGTGAAATCCCGAGGCTCAACCTCGGAACTGCCTTTGATACTGCACGTCTCGAGTCCGGAAGAGGTGAGTGGAATTCCTAG0.270270
d__BacteriaTACGTAGGTGGCAAGCGTTGTCCGGATTTACTGGGCGTAAAGAGCGCGCAGGCGGTCAAGTCAGTCGAATGTGAAAGCCCCCGGCTCAACTGGGGAGGGTCATTCGATACTGCTCGACTTGAAGGCAGGAGAGGGAAGTGGAATTCCCGG0.270270

Annotations:

common ontology terms
Fraction of dbbact annotations with this term covered by the query
TermScore
kingdom of norway0.875000
oslo0.500000
mouse strain o1290.500000
svalbard archipelago0.500000
permafrost active layer0.500000
depth 100-150cm0.500000
depth 150-200cm0.500000
permafrost transition layer0.500000
LOWER IN depth (soil) 20-30cm0.500000
LOWER IN permafrost transition layer0.500000
LOWER IN depth 100-150cm0.500000
LOWER IN depth 150-200cm0.500000
lapland0.500000
LOWER IN lapland0.500000
LOWER IN kingdom of norway0.500000
gadus morhua0.500000
atlantic cod0.500000
depth 0-5cm0.333333
LOWER IN state of colorado0.333333
LOWER IN sweden0.333333
permafrost0.250000
depth (soil) 20-30cm0.250000
LOWER IN age 1 year0.250000
age 1 year0.200000
snow0.200000
LOWER IN finland0.200000
LOWER IN fourth decade human stage0.200000
LOWER IN depth (soil) 0-20cm0.125000
finland0.125000
fourth decade human stage0.125000
LOWER IN colon0.111111
LOWER IN stomach0.100000
state of colorado0.100000
LOWER IN united states of america0.090909
colon0.086957
sheep0.076923
LOWER IN infant0.076923
sweden0.071429
LOWER IN ileum0.066667
ovis aries0.066667
fish0.062500
stomach0.058824
ileum0.052632
depth (soil) 0-20cm0.050000
rumen0.040000
LOWER IN adult0.040000
LOWER IN feces0.037037
digestive system0.034483
infant0.029412
mus musculus0.014085
soil0.009901
homo sapiens0.006192
feces0.005222
adult0.004854
united states of america0.003546
Fraction of annotations for the query sequences containing the term
TermScore
kingdom of norway0.966667
svalbard archipelago0.400000
permafrost0.400000
soil0.400000
homo sapiens0.266667
feces0.233333
oslo0.200000
depth (soil) 20-30cm0.133333
snow0.133333
depth 0-5cm0.133333
infant0.100000
age 1 year0.100000
depth (soil) 0-20cm0.100000
depth 100-150cm0.100000
depth 150-200cm0.100000
lapland0.100000
finland0.100000
sweden0.100000
fourth decade human stage0.100000
adult0.100000
colon0.066667
LOWER IN colon0.066667
mus musculus0.066667
mouse strain o1290.066667
permafrost active layer0.066667
LOWER IN depth (soil) 20-30cm0.066667
fish0.066667
gadus morhua0.066667
atlantic cod0.066667
digestive system0.066667
ovis aries0.066667
sheep0.066667
rumen0.066667
LOWER IN feces0.033333
ileum0.033333
LOWER IN ileum0.033333
LOWER IN stomach0.033333
stomach0.033333
permafrost transition layer0.033333
LOWER IN depth (soil) 0-20cm0.033333
LOWER IN permafrost transition layer0.033333
LOWER IN depth 100-150cm0.033333
LOWER IN depth 150-200cm0.033333
LOWER IN united states of america0.033333
LOWER IN state of colorado0.033333
united states of america0.033333
state of colorado0.033333
LOWER IN lapland0.033333
LOWER IN finland0.033333
LOWER IN kingdom of norway0.033333
LOWER IN sweden0.033333
LOWER IN fourth decade human stage0.033333
LOWER IN adult0.033333
LOWER IN infant0.033333
LOWER IN age 1 year0.033333
Number of experiments associating the term to the sequence
TermScore
kingdom of norway7.000000
homo sapiens2.000000
feces2.000000
colon2.000000
LOWER IN colon2.000000
oslo1.000000
infant1.000000
age 1 year1.000000
LOWER IN feces1.000000
ileum1.000000
LOWER IN ileum1.000000
mus musculus1.000000
mouse strain o1291.000000
LOWER IN stomach1.000000
stomach1.000000
depth (soil) 0-20cm1.000000
svalbard archipelago1.000000
permafrost1.000000
soil1.000000
permafrost active layer1.000000
depth (soil) 20-30cm1.000000
depth 100-150cm1.000000
depth 150-200cm1.000000
permafrost transition layer1.000000
LOWER IN depth (soil) 20-30cm1.000000
LOWER IN depth (soil) 0-20cm1.000000
LOWER IN permafrost transition layer1.000000
LOWER IN depth 100-150cm1.000000
LOWER IN depth 150-200cm1.000000
snow1.000000
depth 0-5cm1.000000
lapland1.000000
LOWER IN united states of america1.000000
LOWER IN state of colorado1.000000
finland1.000000
sweden1.000000
united states of america1.000000
state of colorado1.000000
LOWER IN lapland1.000000
LOWER IN finland1.000000
LOWER IN kingdom of norway1.000000
LOWER IN sweden1.000000
fish1.000000
gadus morhua1.000000
atlantic cod1.000000
digestive system1.000000
ovis aries1.000000
sheep1.000000
rumen1.000000
LOWER IN fourth decade human stage1.000000
LOWER IN adult1.000000
fourth decade human stage1.000000
adult1.000000
LOWER IN infant1.000000
LOWER IN age 1 year1.000000
Exp. ID User ID Description Date Region Sequences Status Flag
329amnondominant ovis aries, sheep, kingdom of norway, rumen2018-05-13v41 / 4approvedNo
347amnondominant kingdom of norway, svalbard archipelago, permafrost, soil, depth 100-150cm2018-07-15v41 / 6approvedNo
347amnondominant kingdom of norway, svalbard archipelago, permafrost, soil, depth 150-200cm2018-07-15v41 / 6approvedNo
268amnondominant fish, gadus morhua, atlantic cod, digestive system, kingdom of norway2017-12-24v41 / 7approvedNo
347amnondominant kingdom of norway, svalbard archipelago, permafrost, soil, depth (soil) 20-30cm2018-07-15v41 / 10approvedNo
347amnondominant depth (soil) 0-20cm, kingdom of norway, svalbard archipelago, permafrost, soil, permafrost active layer2018-07-15v41 / 11approvedNo
511amnondominant snow, depth 0-5cm, lapland, finland, sweden, kingdom of norway2019-03-20v41 / 15approvedNo
330amnon high in infant age 1 year compared to fourth decade human stage adult in homo sapiens feces kingdom of norway oslo 2018-05-13v41 / 19approvedNo
511amnon high in lapland kingdom of norway finland sweden compared to united states of america state of colorado in snow depth 0-5cm 2019-03-20v41 / 21approvedNo
330amnondominant fourth decade human stage, homo sapiens, feces, kingdom of norway, oslo, adult2018-05-13v41 / 21approvedNo
330amnondominant homo sapiens, feces, kingdom of norway, oslo, infant, age 1 year2018-05-13v41 / 24approvedNo
511amnon high in united states of america state of colorado compared to lapland finland kingdom of norway sweden in snow depth 0-5cm 2019-03-20v41 / 24approvedNo
330amnoncommon homo sapiens, feces, kingdom of norway, oslo, infant, age 1 year2018-05-13v41 / 39approvedNo
268amnoncommon fish, gadus morhua, atlantic cod, digestive system, kingdom of norway2017-12-24v41 / 44approvedNo
194amnon high in colon ileum compared to feces in homo sapiens kingdom of norway 2017-09-07v41 / 67approvedNo
8amnon high in stomach compared to colon in mus musculus mouse strain o129 kingdom of norway 2016-10-21v41 / 68approvedNo
347amnoncommon kingdom of norway, svalbard archipelago, permafrost, soil, depth 150-200cm2018-07-15v41 / 126approvedNo
330amnoncommon fourth decade human stage, homo sapiens, feces, kingdom of norway, oslo, adult2018-05-13v41 / 130approvedNo
8amnon high in colon compared to stomach in mus musculus mouse strain o129 kingdom of norway 2016-10-21v41 / 132approvedNo
330amnon high in fourth decade human stage adult compared to infant age 1 year in homo sapiens feces kingdom of norway oslo 2018-05-13v41 / 145approvedNo
194amnon high in feces compared to colon ileum in homo sapiens kingdom of norway 2017-09-07v41 / 169approvedNo
347amnoncommon kingdom of norway, svalbard archipelago, permafrost, soil, depth 100-150cm2018-07-15v41 / 173approvedNo
511amnoncommon snow, depth 0-5cm, lapland, finland, sweden, kingdom of norway2019-03-20v41 / 213approvedNo
347amnon high in depth 100-150cm depth 150-200cm compared to depth (soil) 20-30cm in kingdom of norway svalbard archipelago permafrost soil 2018-07-15v41 / 221approvedNo
347amnoncommon depth (soil) 0-20cm, kingdom of norway, svalbard archipelago, permafrost, soil, permafrost active layer2018-07-15v41 / 405approvedNo
347amnon high in depth (soil) 0-20cm permafrost transition layer compared to depth (soil) 20-30cm in kingdom of norway svalbard archipelago permafrost soil 2018-07-15v41 / 477approvedNo
329amnoncommon ovis aries, sheep, kingdom of norway, rumen2018-05-13v41 / 506approvedNo
347amnoncommon kingdom of norway, svalbard archipelago, permafrost, soil, depth (soil) 20-30cm2018-07-15v41 / 698approvedNo
347amnon high in depth (soil) 20-30cm compared to depth (soil) 0-20cm permafrost transition layer in kingdom of norway svalbard archipelago permafrost soil 2018-07-15v41 / 788approvedNo
347amnon high in depth (soil) 20-30cm compared to depth 100-150cm depth 150-200cm in kingdom of norway svalbard archipelago permafrost soil 2018-07-15v41 / 1080approvedNo

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