Summary for ontology term: late time points

Number of annotations with term: 24

Annotations:

common ontology terms
term enrichment score
TermScore
late time points0.782895
LOWER IN early time points0.525000
biomat0.454545
microbial biomat0.454545
water treatment pond0.454545
benthic biomat0.454545
engineered wetland0.454545
early time points0.432099
LOWER IN late time points0.432099
outlet0.200000
state of california0.145833
malaria0.142857
LOWER IN malaria0.142857
size < 1um0.142857
size 1-80um0.142857
plant fluid0.142857
harvard forest0.142857
sarracenia purpurea0.142857
pitcher plant0.142857
pitcher fluid0.142857
influent0.133333
particle bound0.125000
depth 2000-3000m0.125000
surface water0.111111
free floating0.111111
mediterranean sea0.111111
commonwealth of massachusetts0.105263
japan0.105263
balb/c0.100000
sea water0.093023
pacific ocean0.083333
experimental cerebral malaria0.076923
LOWER IN experimental cerebral malaria0.076923
inlet0.076923
LOWER IN outlet0.076923
LOWER IN inlet0.076923
fermentation/modification process0.076923
1-2 months0.076923
LOWER IN 0-1 months0.076923
fermented vegetable food product0.076923
days 0-30.076923
LOWER IN days 57-600.076923
days 57-600.076923
LOWER IN days 0-30.076923
35 weeks0.076923
LOWER IN 25 weeks0.076923
kimchi0.074074
wistar rat0.074074
depth 0m0.074074
LOWER IN depth 0m0.071429
c57bl/60.068966
rattus0.066667
LOWER IN research facility0.064516
czech republic0.064516
water0.063492
south korea0.054054
LOWER IN wild0.054054
rat0.050000
age0.044444
wild0.042553
research facility0.040000
mouse0.032787
mus musculus0.029412
united states of america0.016667
feces0.013263
LOWER IN control0.011111
control0.011050
Fraction of dbbact annotations with this term covered by the query
TermScore
late time points0.875000
LOWER IN early time points0.875000
early time points0.833333
LOWER IN late time points0.833333
experimental cerebral malaria0.500000
malaria0.500000
LOWER IN experimental cerebral malaria0.500000
LOWER IN malaria0.500000
biomat0.500000
microbial biomat0.500000
water treatment pond0.500000
benthic biomat0.500000
engineered wetland0.500000
outlet0.500000
inlet0.500000
LOWER IN outlet0.500000
LOWER IN inlet0.500000
size < 1um0.500000
size 1-80um0.500000
fermentation/modification process0.500000
1-2 months0.500000
LOWER IN 0-1 months0.500000
fermented vegetable food product0.500000
days 0-30.500000
LOWER IN days 57-600.500000
plant fluid0.500000
harvard forest0.500000
sarracenia purpurea0.500000
pitcher plant0.500000
pitcher fluid0.500000
days 57-600.500000
LOWER IN days 0-30.500000
35 weeks0.500000
LOWER IN 25 weeks0.500000
influent0.333333
kimchi0.333333
wistar rat0.333333
depth 0m0.333333
particle bound0.250000
depth 2000-3000m0.250000
LOWER IN depth 0m0.250000
free floating0.166667
rattus0.166667
mediterranean sea0.166667
LOWER IN research facility0.142857
commonwealth of massachusetts0.142857
czech republic0.142857
balb/c0.125000
state of california0.083333
surface water0.083333
japan0.076923
south korea0.076923
LOWER IN wild0.076923
rat0.062500
c57bl/60.058824
sea water0.057143
pacific ocean0.055556
age0.047619
wild0.043478
water0.036364
research facility0.021739
mouse0.018182
mus musculus0.016129
united states of america0.008475
feces0.006849
LOWER IN control0.005952
control0.005917
Fraction of annotations for the query sequences containing the term
TermScore
late time points0.708333
state of california0.583333
united states of america0.500000
biomat0.416667
microbial biomat0.416667
water treatment pond0.416667
benthic biomat0.416667
engineered wetland0.416667
LOWER IN early time points0.375000
early time points0.291667
LOWER IN late time points0.291667
research facility0.250000
water0.250000
sea water0.250000
feces0.208333
mus musculus0.166667
mouse0.166667
japan0.166667
surface water0.166667
pacific ocean0.166667
outlet0.125000
malaria0.083333
LOWER IN control0.083333
c57bl/60.083333
control0.083333
LOWER IN malaria0.083333
balb/c0.083333
influent0.083333
free floating0.083333
size < 1um0.083333
particle bound0.083333
size 1-80um0.083333
commonwealth of massachusetts0.083333
plant fluid0.083333
harvard forest0.083333
sarracenia purpurea0.083333
pitcher plant0.083333
pitcher fluid0.083333
mediterranean sea0.083333
depth 2000-3000m0.083333
experimental cerebral malaria0.041667
LOWER IN experimental cerebral malaria0.041667
inlet0.041667
LOWER IN outlet0.041667
LOWER IN inlet0.041667
fermentation/modification process0.041667
1-2 months0.041667
LOWER IN 0-1 months0.041667
kimchi0.041667
fermented vegetable food product0.041667
south korea0.041667
wild0.041667
days 0-30.041667
LOWER IN research facility0.041667
LOWER IN days 57-600.041667
days 57-600.041667
LOWER IN wild0.041667
LOWER IN days 0-30.041667
age0.041667
35 weeks0.041667
LOWER IN 25 weeks0.041667
rattus0.041667
czech republic0.041667
rat0.041667
wistar rat0.041667
depth 0m0.041667
LOWER IN depth 0m0.041667
Exp. ID User ID Description Date Region Flag Sequences
705amnonincreases during kimchi fermentation ( high in late time points fermentation/modification process 1-2 months compared to early time points 0-1 months in kimchi fermented vegetable food product south korea )2028-04-04v3No1 / -3
665amnondominant united states of america, state of california, influent, late time points, biomat, microbial biomat, water treatment pond, benthic biomat, engineered wetland2020-09-23v4No1 / -1
665amnondominant united states of america, state of california, late time points, biomat, microbial biomat, water treatment pond, benthic biomat, engineered wetland, outlet2020-09-23v4No1 / 0
665amnondominant united states of america, state of california, late time points, biomat, microbial biomat, water treatment pond, benthic biomat, engineered wetland2020-09-23v4No1 / 3
503amnonincreases following malaria infection ( high in late time points malaria compared to control early time points in feces research facility mus musculus balb/c mouse japan )2019-03-12v4No1 / 9
614amnonincreases in picher plant fluid grown in lab ( high in research facility late time points days 57-60 compared to early time points wild days 0-3 in united states of america commonwealth of massachusetts plant fluid harvard forest sarracenia purpurea pitcher plant pitcher fluid )2020-04-26v4No1 / 12
503amnondecreases following malaria infection ( high in control early time points compared to late time points malaria in feces research facility mus musculus balb/c mouse japan )2019-03-12v4No1 / 21
187amnonpositively correlated with age 25-35 weeks ( high in age late time points 35 weeks compared to early time points 25 weeks in feces research facility rattus czech republic rat wistar rat )2017-08-23v4No1 / 25
503amnonincreases following malaria infection ( high in late time points experimental cerebral malaria malaria compared to control early time points in feces research facility mus musculus c57bl/6 mouse japan )2019-03-12v4No1 / 30
614amnondecreases in picher plant fluid grown in lab ( high in early time points wild days 0-3 compared to research facility late time points days 57-60 in united states of america commonwealth of massachusetts plant fluid harvard forest sarracenia purpurea pitcher plant pitcher fluid )2020-04-26v4No1 / 34
503amnondecreases following malaria infection ( high in control early time points compared to late time points experimental cerebral malaria malaria in feces research facility mus musculus c57bl/6 mouse japan )2019-03-12v4No1 / 50
505amnon high in early time points compared to late time points in water surface water sea water state of california pacific ocean free floating size < 1um 2019-03-16v4No1 / 88
500amnonincreases when incubating water sample from depth 2100m at depth 0m for one year ( high in late time points depth 0m compared to early time points in water sea water mediterranean sea depth 2000-3000m )2019-03-05v4No1 / 106
500amnondecreases when incubating water sample from depth 2100m at depth 0m for one year ( high in early time points compared to late time points depth 0m in water sea water mediterranean sea depth 2000-3000m )2019-03-05v4No1 / 124
505amnon high in early time points compared to late time points in water surface water sea water state of california pacific ocean particle bound size 1-80um 2019-03-16v4No1 / 215
505amnon high in late time points compared to early time points in water surface water sea water state of california pacific ocean free floating size < 1um 2019-03-16v4No1 / 241
665amnoncommon united states of america, state of california, late time points, biomat, microbial biomat, water treatment pond, benthic biomat, engineered wetland2020-09-23v4No1 / 359
665amnoncommon united states of america, state of california, late time points, biomat, microbial biomat, water treatment pond, benthic biomat, engineered wetland, outlet2020-09-23v4No1 / 454
665amnoncommon united states of america, state of california, influent, late time points, biomat, microbial biomat, water treatment pond, benthic biomat, engineered wetland2020-09-23v4No1 / 519
505amnon high in late time points compared to early time points in water surface water sea water state of california pacific ocean particle bound size 1-80um 2019-03-16v4No1 / 604
665amnon high in outlet compared to inlet in united states of america state of california late time points biomat microbial biomat water treatment pond benthic biomat engineered wetland 2020-09-23v4No1 / 723
665amnon high in late time points compared to early time points in united states of america state of california biomat microbial biomat water treatment pond benthic biomat engineered wetland 2020-09-23v4No1 / 877
665amnon high in early time points compared to late time points in united states of america state of california biomat microbial biomat water treatment pond benthic biomat engineered wetland 2020-09-23v4No1 / 1045
665amnon high in inlet compared to outlet in united states of america state of california late time points biomat microbial biomat water treatment pond benthic biomat engineered wetland 2020-09-23v4No1 / 1622

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