Summary for ontology term: late time points

Number of annotations with term: 13

Annotations:

common ontology terms
term enrichment score
TermScore
late time points0.654206
LOWER IN early time points0.654206
early time points0.585366
LOWER IN late time points0.585366
malaria0.235294
LOWER IN malaria0.235294
harvard forest0.235294
plant fluid0.235294
pitcher fluid0.235294
pitcher plant0.235294
sarracenia purpurea0.235294
size < 1um0.235294
size 1-80um0.235294
particle bound0.210526
depth 2000-3000m0.210526
mediterranean sea0.190476
commonwealth of massachusetts0.173913
free floating0.173913
surface water0.150943
japan0.140351
balb/c0.137931
experimental cerebral malaria0.133333
LOWER IN experimental cerebral malaria0.133333
LOWER IN days 57-600.133333
days 0-30.133333
LOWER IN days 0-30.133333
days 57-600.133333
35 weeks0.133333
LOWER IN 25 weeks0.133333
wistar rat0.125000
depth 0m0.125000
LOWER IN depth 0m0.117647
sea water0.113208
LOWER IN research facility0.111111
rattus0.105263
czech republic0.100000
pacific ocean0.094118
state of california0.089888
c57bl/60.088889
LOWER IN wild0.086957
rat0.074074
water0.069767
wild0.064516
age0.058824
research facility0.051064
mouse0.036199
mus musculus0.032129
feces0.016116
LOWER IN control0.013378
control0.013289
united states of america0.009281
Fraction of dbbact annotations with this term covered by the query
TermScore
late time points0.833333
LOWER IN early time points0.833333
early time points0.800000
LOWER IN late time points0.800000
experimental cerebral malaria0.500000
malaria0.500000
LOWER IN experimental cerebral malaria0.500000
LOWER IN malaria0.500000
LOWER IN days 57-600.500000
days 0-30.500000
harvard forest0.500000
plant fluid0.500000
pitcher fluid0.500000
pitcher plant0.500000
sarracenia purpurea0.500000
LOWER IN days 0-30.500000
days 57-600.500000
35 weeks0.500000
LOWER IN 25 weeks0.500000
size < 1um0.500000
size 1-80um0.500000
wistar rat0.333333
particle bound0.333333
depth 2000-3000m0.333333
depth 0m0.333333
mediterranean sea0.250000
LOWER IN depth 0m0.250000
LOWER IN research facility0.200000
commonwealth of massachusetts0.200000
free floating0.200000
rattus0.166667
czech republic0.142857
balb/c0.125000
LOWER IN wild0.100000
surface water0.100000
japan0.090909
rat0.071429
sea water0.064516
c57bl/60.062500
wild0.055556
pacific ocean0.055556
state of california0.052632
age0.047619
water0.037736
research facility0.027027
mouse0.019231
mus musculus0.016949
feces0.008230
LOWER IN control0.006993
control0.006944
united states of america0.004785
Fraction of annotations for the query sequences containing the term
TermScore
late time points0.538462
LOWER IN early time points0.538462
research facility0.461538
early time points0.461538
LOWER IN late time points0.461538
water0.461538
sea water0.461538
feces0.384615
mouse0.307692
mus musculus0.307692
japan0.307692
pacific ocean0.307692
state of california0.307692
surface water0.307692
c57bl/60.153846
LOWER IN control0.153846
malaria0.153846
control0.153846
LOWER IN malaria0.153846
balb/c0.153846
harvard forest0.153846
plant fluid0.153846
pitcher fluid0.153846
united states of america0.153846
commonwealth of massachusetts0.153846
pitcher plant0.153846
sarracenia purpurea0.153846
size < 1um0.153846
free floating0.153846
particle bound0.153846
size 1-80um0.153846
mediterranean sea0.153846
depth 2000-3000m0.153846
experimental cerebral malaria0.076923
LOWER IN experimental cerebral malaria0.076923
LOWER IN research facility0.076923
LOWER IN days 57-600.076923
wild0.076923
days 0-30.076923
LOWER IN wild0.076923
LOWER IN days 0-30.076923
days 57-600.076923
rat0.076923
rattus0.076923
wistar rat0.076923
czech republic0.076923
age0.076923
35 weeks0.076923
LOWER IN 25 weeks0.076923
depth 0m0.076923
LOWER IN depth 0m0.076923
Exp. ID User ID Description Date Region Flag Sequences
503amnonincreases following malaria infection ( high in late time points malaria compared to control early time points in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 16
614amnonincreases in picher plant fluid grown in lab ( high in research facility days 57-60 late time points compared to wild days 0-3 early time points in harvard forest plant fluid pitcher fluid united states of america commonwealth of massachusetts pitcher plant sarracenia purpurea )2020-04-26v4No1 / 19
503amnondecreases following malaria infection ( high in control early time points compared to late time points malaria in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 28
187amnonpositively correlated with age 25-35 weeks ( high in late time points age 35 weeks compared to early time points 25 weeks in rat rattus research facility feces wistar rat czech republic )2017-08-23v4No1 / 32
503amnonincreases following malaria infection ( high in late time points experimental cerebral malaria malaria compared to control early time points in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 37
614amnondecreases in picher plant fluid grown in lab ( high in wild early time points days 0-3 compared to research facility late time points days 57-60 in harvard forest plant fluid pitcher fluid united states of america commonwealth of massachusetts pitcher plant sarracenia purpurea )2020-04-26v4No1 / 41
503amnondecreases following malaria infection ( high in control early time points compared to late time points experimental cerebral malaria malaria in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 57
505amnon high in early time points compared to late time points in water pacific ocean state of california surface water size < 1um free floating sea water 2019-03-16v4No1 / 95
500amnonincreases when incubating water sample from depth 2100m at depth 0m for one year ( high in late time points depth 0m compared to early time points in water mediterranean sea depth 2000-3000m sea water )2019-03-05v4No1 / 113
500amnondecreases when incubating water sample from depth 2100m at depth 0m for one year ( high in early time points compared to depth 0m late time points in water mediterranean sea depth 2000-3000m sea water )2019-03-05v4No1 / 131
505amnon high in early time points compared to late time points in water pacific ocean state of california surface water particle bound size 1-80um sea water 2019-03-16v4No1 / 222
505amnon high in late time points compared to early time points in water pacific ocean state of california surface water size < 1um free floating sea water 2019-03-16v4No1 / 248
505amnon high in late time points compared to early time points in water pacific ocean state of california surface water particle bound size 1-80um sea water 2019-03-16v4No1 / 611

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