Summary for ontology term: late time points

Number of annotations with term: 24

Annotations:

common ontology terms
term enrichment score
TermScore
late time points0.782895
LOWER IN early time points0.525000
engineered wetland0.454545
benthic biomat0.454545
water treatment pond0.454545
microbial biomat0.454545
biomat0.454545
early time points0.432099
LOWER IN late time points0.432099
outlet0.200000
state of california0.157303
malaria0.142857
LOWER IN malaria0.142857
size < 1um0.142857
size 1-80um0.142857
harvard forest0.142857
plant fluid0.142857
pitcher fluid0.142857
pitcher plant0.142857
sarracenia purpurea0.142857
influent0.133333
particle bound0.133333
depth 2000-3000m0.133333
surface water0.125000
japan0.117647
free floating0.117647
commonwealth of massachusetts0.117647
mediterranean sea0.117647
balb/c0.100000
sea water0.097561
pacific ocean0.083333
experimental cerebral malaria0.076923
LOWER IN experimental cerebral malaria0.076923
LOWER IN outlet0.076923
inlet0.076923
LOWER IN inlet0.076923
fermented vegetable food product0.076923
1-2 months0.076923
LOWER IN 0-1 months0.076923
fermentation/modification process0.076923
LOWER IN days 57-600.076923
days 0-30.076923
LOWER IN days 0-30.076923
days 57-600.076923
35 weeks0.076923
LOWER IN 25 weeks0.076923
kimchi0.074074
wistar rat0.074074
depth 0m0.074074
c57bl/60.071429
LOWER IN depth 0m0.071429
LOWER IN research facility0.068966
rattus0.066667
water0.064516
czech republic0.064516
south korea0.058824
LOWER IN wild0.058824
rat0.051282
wild0.046512
research facility0.045802
age0.044444
mouse0.034483
mus musculus0.030769
united states of america0.018018
feces0.014892
LOWER IN control0.012048
control0.011976
Fraction of dbbact annotations with this term covered by the query
TermScore
late time points0.875000
LOWER IN early time points0.875000
early time points0.833333
LOWER IN late time points0.833333
experimental cerebral malaria0.500000
malaria0.500000
LOWER IN experimental cerebral malaria0.500000
LOWER IN malaria0.500000
engineered wetland0.500000
benthic biomat0.500000
water treatment pond0.500000
microbial biomat0.500000
biomat0.500000
outlet0.500000
LOWER IN outlet0.500000
inlet0.500000
LOWER IN inlet0.500000
size < 1um0.500000
size 1-80um0.500000
fermented vegetable food product0.500000
1-2 months0.500000
LOWER IN 0-1 months0.500000
fermentation/modification process0.500000
LOWER IN days 57-600.500000
days 0-30.500000
harvard forest0.500000
plant fluid0.500000
pitcher fluid0.500000
pitcher plant0.500000
sarracenia purpurea0.500000
LOWER IN days 0-30.500000
days 57-600.500000
35 weeks0.500000
LOWER IN 25 weeks0.500000
influent0.333333
particle bound0.333333
kimchi0.333333
wistar rat0.333333
depth 2000-3000m0.333333
depth 0m0.333333
LOWER IN depth 0m0.250000
free floating0.200000
LOWER IN research facility0.200000
commonwealth of massachusetts0.200000
mediterranean sea0.200000
rattus0.166667
czech republic0.142857
balb/c0.125000
surface water0.100000
south korea0.100000
LOWER IN wild0.100000
japan0.090909
state of california0.090909
rat0.066667
c57bl/60.062500
sea water0.060606
pacific ocean0.055556
wild0.052632
age0.047619
water0.037037
research facility0.025210
mouse0.019231
mus musculus0.016949
united states of america0.009174
feces0.007722
LOWER IN control0.006494
control0.006452
Fraction of annotations for the query sequences containing the term
TermScore
late time points0.708333
state of california0.583333
united states of america0.500000
engineered wetland0.416667
benthic biomat0.416667
water treatment pond0.416667
microbial biomat0.416667
biomat0.416667
LOWER IN early time points0.375000
early time points0.291667
LOWER IN late time points0.291667
research facility0.250000
water0.250000
sea water0.250000
feces0.208333
mouse0.166667
mus musculus0.166667
japan0.166667
pacific ocean0.166667
surface water0.166667
outlet0.125000
c57bl/60.083333
LOWER IN control0.083333
malaria0.083333
control0.083333
LOWER IN malaria0.083333
balb/c0.083333
influent0.083333
size < 1um0.083333
free floating0.083333
particle bound0.083333
size 1-80um0.083333
harvard forest0.083333
plant fluid0.083333
pitcher fluid0.083333
commonwealth of massachusetts0.083333
pitcher plant0.083333
sarracenia purpurea0.083333
mediterranean sea0.083333
depth 2000-3000m0.083333
experimental cerebral malaria0.041667
LOWER IN experimental cerebral malaria0.041667
LOWER IN outlet0.041667
inlet0.041667
LOWER IN inlet0.041667
south korea0.041667
kimchi0.041667
fermented vegetable food product0.041667
1-2 months0.041667
LOWER IN 0-1 months0.041667
fermentation/modification process0.041667
LOWER IN research facility0.041667
LOWER IN days 57-600.041667
wild0.041667
days 0-30.041667
LOWER IN wild0.041667
LOWER IN days 0-30.041667
days 57-600.041667
rat0.041667
rattus0.041667
wistar rat0.041667
czech republic0.041667
age0.041667
35 weeks0.041667
LOWER IN 25 weeks0.041667
depth 0m0.041667
LOWER IN depth 0m0.041667
Exp. ID User ID Description Date Region Flag Sequences
705amnonincreases during kimchi fermentation ( high in late time points 1-2 months fermentation/modification process compared to early time points 0-1 months in south korea kimchi fermented vegetable food product )2028-04-04v3No1 / 4
665amnondominant late time points, engineered wetland, benthic biomat, state of california, influent, water treatment pond, microbial biomat, biomat, united states of america2020-09-23v4No1 / 6
665amnondominant late time points, outlet, engineered wetland, benthic biomat, state of california, water treatment pond, microbial biomat, biomat, united states of america2020-09-23v4No1 / 7
665amnondominant late time points, engineered wetland, benthic biomat, state of california, water treatment pond, microbial biomat, biomat, united states of america2020-09-23v4No1 / 10
503amnonincreases following malaria infection ( high in late time points malaria compared to control early time points in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 16
614amnonincreases in picher plant fluid grown in lab ( high in research facility days 57-60 late time points compared to wild days 0-3 early time points in harvard forest plant fluid pitcher fluid united states of america commonwealth of massachusetts pitcher plant sarracenia purpurea )2020-04-26v4No1 / 19
503amnondecreases following malaria infection ( high in control early time points compared to late time points malaria in mouse mus musculus research facility feces balb/c japan )2019-03-12v4No1 / 28
187amnonpositively correlated with age 25-35 weeks ( high in late time points age 35 weeks compared to early time points 25 weeks in rat rattus research facility feces wistar rat czech republic )2017-08-23v4No1 / 32
503amnonincreases following malaria infection ( high in late time points experimental cerebral malaria malaria compared to control early time points in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 37
614amnondecreases in picher plant fluid grown in lab ( high in wild early time points days 0-3 compared to research facility late time points days 57-60 in harvard forest plant fluid pitcher fluid united states of america commonwealth of massachusetts pitcher plant sarracenia purpurea )2020-04-26v4No1 / 41
503amnondecreases following malaria infection ( high in control early time points compared to late time points experimental cerebral malaria malaria in mouse mus musculus research facility c57bl/6 feces japan )2019-03-12v4No1 / 57
505amnon high in early time points compared to late time points in water pacific ocean state of california surface water size < 1um free floating sea water 2019-03-16v4No1 / 95
500amnonincreases when incubating water sample from depth 2100m at depth 0m for one year ( high in late time points depth 0m compared to early time points in water mediterranean sea depth 2000-3000m sea water )2019-03-05v4No1 / 113
500amnondecreases when incubating water sample from depth 2100m at depth 0m for one year ( high in early time points compared to depth 0m late time points in water mediterranean sea depth 2000-3000m sea water )2019-03-05v4No1 / 131
505amnon high in early time points compared to late time points in water pacific ocean state of california surface water particle bound size 1-80um sea water 2019-03-16v4No1 / 222
505amnon high in late time points compared to early time points in water pacific ocean state of california surface water size < 1um free floating sea water 2019-03-16v4No1 / 248
665amnoncommon late time points, engineered wetland, benthic biomat, state of california, water treatment pond, microbial biomat, biomat, united states of america2020-09-23v4No1 / 366
665amnoncommon late time points, outlet, engineered wetland, benthic biomat, state of california, water treatment pond, microbial biomat, biomat, united states of america2020-09-23v4No1 / 461
665amnoncommon late time points, engineered wetland, benthic biomat, state of california, influent, water treatment pond, microbial biomat, biomat, united states of america2020-09-23v4No1 / 526
505amnon high in late time points compared to early time points in water pacific ocean state of california surface water particle bound size 1-80um sea water 2019-03-16v4No1 / 611
665amnon high in outlet compared to inlet in late time points engineered wetland benthic biomat state of california water treatment pond microbial biomat biomat united states of america 2020-09-23v4No1 / 730
665amnon high in late time points compared to early time points in engineered wetland benthic biomat state of california water treatment pond microbial biomat biomat united states of america 2020-09-23v4No1 / 884
665amnon high in early time points compared to late time points in engineered wetland benthic biomat state of california water treatment pond microbial biomat biomat united states of america 2020-09-23v4No1 / 1052
665amnon high in inlet compared to outlet in late time points engineered wetland benthic biomat state of california water treatment pond microbial biomat biomat united states of america 2020-09-23v4No1 / 1629

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