Summary for ontology term: late timepoints

Number of annotations with term: 28

Annotations:

common ontology terms
term enrichment score
TermScore
late timepoints0.685714
LOWER IN late timepoints0.578313
early timepoints0.522034
LOWER IN early timepoints0.476190
texas0.461538
LOWER IN fasting0.279070
30-60 days0.263158
state of georgia0.260870
fasting0.230769
nile tilapia0.222222
oreochromis niloticus0.200000
cow0.187500
coastal water0.176471
chitin beads0.176471
commonwealth of massachusetts0.162162
colon0.146341
bos taurus0.136364
mouse0.126984
rice field0.125000
coturnix coturnix0.125000
common quail0.125000
atlantic ocean0.115385
surface water0.115385
mus musculus0.114286
rice0.111111
oryza sativa0.105263
hunan province0.100000
research facility0.094563
sweden0.090909
caecum0.077922
ocean water0.075949
farm0.075000
LOWER IN trichuris muris0.066667
trichuris muris0.066667
state of rhode island0.066667
kimchi0.066667
days 1-90.066667
0-2 days0.066667
LOWER IN 30-60 days0.066667
LOWER IN 0-2 days0.066667
unshaded0.066667
sunlight0.066667
LOWER IN shaded0.066667
shaded0.066667
LOWER IN unshaded0.066667
LOWER IN sunlight0.066667
anaxyrus terrestris0.066667
southern toad0.066667
age 25 weeks0.066667
LOWER IN age 35 weeks0.066667
nzb/w f10.066667
age 10-18 weeks0.066667
LOWER IN 23-33 weeks0.066667
LOWER IN parasitic helminthiasis infectious disease0.064516
parasitic helminthiasis infectious disease0.064516
LOWER IN day 00.064516
LOWER IN seedling0.064516
seedling0.064516
wistar rat0.064516
LOWER IN systemic lupus erythematosus0.064516
united states of america0.063727
czech republic0.060606
rattus0.058824
LOWER IN age0.058824
fermented food product0.055556
rat0.050000
rhizosphere0.048780
feces0.038797
water0.036810
soil0.030769
control0.027397
china0.020408
LOWER IN control0.013793
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN late timepoints0.888889
late timepoints0.857143
early timepoints0.777778
LOWER IN early timepoints0.714286
LOWER IN trichuris muris0.500000
trichuris muris0.500000
state of rhode island0.500000
kimchi0.500000
days 1-90.500000
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
texas0.500000
rice field0.500000
nile tilapia0.500000
coastal water0.500000
chitin beads0.500000
anaxyrus terrestris0.500000
southern toad0.500000
age 25 weeks0.500000
LOWER IN age 35 weeks0.500000
coturnix coturnix0.500000
common quail0.500000
nzb/w f10.500000
age 10-18 weeks0.500000
LOWER IN 23-33 weeks0.500000
LOWER IN fasting0.400000
LOWER IN parasitic helminthiasis infectious disease0.333333
parasitic helminthiasis infectious disease0.333333
LOWER IN day 00.333333
state of georgia0.333333
LOWER IN seedling0.333333
seedling0.333333
oreochromis niloticus0.333333
commonwealth of massachusetts0.333333
wistar rat0.333333
LOWER IN systemic lupus erythematosus0.333333
rice0.250000
fasting0.250000
oryza sativa0.200000
czech republic0.200000
cow0.166667
hunan province0.166667
rattus0.166667
LOWER IN age0.166667
sweden0.125000
fermented food product0.125000
atlantic ocean0.125000
surface water0.125000
colon0.111111
bos taurus0.100000
rat0.083333
mouse0.081633
mus musculus0.071429
ocean water0.058824
research facility0.051546
caecum0.047619
farm0.045455
rhizosphere0.037037
united states of america0.033149
water0.022222
feces0.020513
soil0.019608
control0.016949
china0.011905
LOWER IN control0.008547
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.821429
research facility0.571429
late timepoints0.571429
LOWER IN late timepoints0.428571
texas0.428571
early timepoints0.392857
feces0.357143
LOWER IN early timepoints0.357143
mus musculus0.285714
mouse0.285714
bos taurus0.214286
cow0.214286
farm0.214286
state of georgia0.214286
colon0.214286
LOWER IN fasting0.214286
fasting0.214286
caecum0.214286
30-60 days0.178571
oreochromis niloticus0.142857
nile tilapia0.142857
water0.107143
ocean water0.107143
atlantic ocean0.107143
surface water0.107143
coastal water0.107143
commonwealth of massachusetts0.107143
chitin beads0.107143
sweden0.071429
control0.071429
soil0.071429
rhizosphere0.071429
oryza sativa0.071429
rice0.071429
china0.071429
hunan province0.071429
rice field0.071429
coturnix coturnix0.071429
common quail0.071429
LOWER IN parasitic helminthiasis infectious disease0.035714
LOWER IN trichuris muris0.035714
parasitic helminthiasis infectious disease0.035714
trichuris muris0.035714
LOWER IN control0.035714
state of rhode island0.035714
fermented food product0.035714
kimchi0.035714
days 1-90.035714
LOWER IN day 00.035714
0-2 days0.035714
LOWER IN 30-60 days0.035714
LOWER IN 0-2 days0.035714
unshaded0.035714
sunlight0.035714
LOWER IN shaded0.035714
shaded0.035714
LOWER IN unshaded0.035714
LOWER IN sunlight0.035714
LOWER IN seedling0.035714
seedling0.035714
anaxyrus terrestris0.035714
southern toad0.035714
rat0.035714
rattus0.035714
wistar rat0.035714
czech republic0.035714
age 25 weeks0.035714
LOWER IN age 35 weeks0.035714
LOWER IN age0.035714
nzb/w f10.035714
age 10-18 weeks0.035714
LOWER IN 23-33 weeks0.035714
LOWER IN systemic lupus erythematosus0.035714
Exp. ID User ID Description Date Region Flag Sequences
108amnondecreases during fasting in nile tilapia colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-07v4No1 / 4
311amnonhigher in fermneted kimchi days>1 compared to day 0 ( high in late timepoints days 1-9 compared to day 0 early timepoints in united states of america state of rhode island fermented food product kimchi )2018-04-09v4No1 / 6
108amnonincreases during fasting in nile tilapia caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum oreochromis niloticus nile tilapia )2017-04-07v4No1 / 17
466amnonhigh freq. in cow feces left in field for 30-60 days (highfreq feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 18
108amnonincreases during fasting in mouse caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum mus musculus mouse )2017-04-07v4No1 / 19
187amnonnegatively correlated with age 25-35 weeks ( high in early timepoints age 25 weeks compared to late timepoints age 35 weeks age in rat rattus research facility feces wistar rat czech republic )2017-08-23v4No1 / 23
108amnondecreases during fasting in mouse caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum mus musculus mouse )2017-04-07v4No1 / 29
108amnonincreases during fasting in mouse colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 31
108amnonincreases during fasting in quail caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum coturnix coturnix common quail )2017-04-07v4No1 / 33
119amnonhigher in late timepoints (>4weeks) of worm infected mice ( high in parasitic helminthiasis infectious disease trichuris muris late timepoints compared to control in mus musculus mouse feces research facility sweden )2017-04-12v4No1 / 40
108amnonincreases during fasting in southern frog colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon anaxyrus terrestris southern toad )2017-04-07v4No1 / 45
108amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 59
373amnonlower in soil of mature plants compared to seedlings ( high in early timepoints seedling compared to late timepoints in soil rhizosphere oryza sativa rice china hunan province rice field )2018-09-08v4No1 / 66
108amnondecreases during fasting in quail caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum coturnix coturnix common quail )2017-04-07v4No1 / 76
373amnonhigher in soil of mature plants compared to seedlings ( high in late timepoints compared to seedling early timepoints in soil rhizosphere oryza sativa rice china hunan province rice field )2018-09-08v4No1 / 81
108amnonincreases during fasting in nile tilapia colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-07v4No1 / 81
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 112
107amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 120
461amnonlate colonizers in chitin beads incubated in ocean water (other water, ocean water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, late timepoints)2019-01-12v4No1 / 120
108amnondecreases during fasting in nile tilapia caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum oreochromis niloticus nile tilapia )2017-04-07v4No1 / 122
368amnonlower in nzb/w f1 mice late timepoints (SLE model) compared to early timepoints ( high in control early timepoints age 10-18 weeks compared to late timepoints 23-33 weeks systemic lupus erythematosus in feces united states of america mouse mus musculus research facility nzb/w f1 )2018-09-03v4No1 / 132
461amnonlower in early compared to late timepoints in chitin beads incubated in ocean water ( high in late timepoints compared to early timepoints in water ocean water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads )2019-01-12v4No1 / 141
119amnonlower in late timepoints (>4weeks) of worm infected mice ( high in control compared to parasitic helminthiasis infectious disease trichuris muris late timepoints in mus musculus mouse feces research facility sweden )2017-04-12v4No1 / 155
461amnonhigher in early compared to late timepoints in chitin beads incubated in ocean water ( high in early timepoints compared to late timepoints in water ocean water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads )2019-01-12v4No1 / 160
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 221
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 432
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 662
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1329

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