Summary for ontology term: late timepoints

Number of annotations with term: 28

Annotations:

common ontology terms
term enrichment score
TermScore
late timepoints0.685714
LOWER IN late timepoints0.578313
early timepoints0.522034
LOWER IN early timepoints0.476190
texas0.461538
colon0.352941
LOWER IN fasting0.279070
30-60 days0.263158
fasting0.230769
caecum0.230769
nile tilapia0.222222
state of georgia0.206897
oreochromis niloticus0.200000
coastal water0.176471
chitin beads0.176471
cow0.157895
commonwealth of massachusetts0.139535
coturnix coturnix0.125000
common quail0.125000
mouse0.121212
bos taurus0.120000
rice field0.117647
atlantic ocean0.115385
rice0.111111
mus musculus0.109589
oryza sativa0.105263
surface water0.103448
hunan province0.100000
research facility0.083507
sweden0.083333
LOWER IN trichuris muris0.066667
trichuris muris0.066667
state of rhode island0.066667
kimchi0.066667
days 1-90.066667
0-2 days0.066667
LOWER IN 30-60 days0.066667
LOWER IN 0-2 days0.066667
unshaded0.066667
sunlight0.066667
LOWER IN shaded0.066667
shaded0.066667
LOWER IN unshaded0.066667
LOWER IN sunlight0.066667
anaxyrus terrestris0.066667
southern toad0.066667
age 25 weeks0.066667
LOWER IN age 35 weeks0.066667
nzb/w f10.066667
age 10-18 weeks0.066667
LOWER IN 23-33 weeks0.066667
LOWER IN parasitic helminthiasis infectious disease0.064516
parasitic helminthiasis infectious disease0.064516
LOWER IN day 00.064516
LOWER IN seedling0.064516
wistar rat0.064516
LOWER IN systemic lupus erythematosus0.064516
seedling0.062500
farm0.059406
rattus0.058824
czech republic0.057143
LOWER IN age0.057143
food (fermented)0.055556
united states of america0.055477
sea water0.049587
rat0.047619
rhizosphere0.042553
water0.032086
feces0.031471
soil0.025641
control0.023256
china0.016000
LOWER IN control0.011696
Fraction of dbbact annotations with this term covered by the query
TermScore
colon1.000000
LOWER IN late timepoints0.888889
late timepoints0.857143
early timepoints0.777778
LOWER IN early timepoints0.714286
LOWER IN trichuris muris0.500000
trichuris muris0.500000
state of rhode island0.500000
kimchi0.500000
days 1-90.500000
0-2 days0.500000
LOWER IN 30-60 days0.500000
30-60 days0.500000
LOWER IN 0-2 days0.500000
unshaded0.500000
sunlight0.500000
LOWER IN shaded0.500000
shaded0.500000
LOWER IN unshaded0.500000
LOWER IN sunlight0.500000
texas0.500000
nile tilapia0.500000
coastal water0.500000
chitin beads0.500000
anaxyrus terrestris0.500000
southern toad0.500000
age 25 weeks0.500000
LOWER IN age 35 weeks0.500000
coturnix coturnix0.500000
common quail0.500000
nzb/w f10.500000
age 10-18 weeks0.500000
LOWER IN 23-33 weeks0.500000
LOWER IN fasting0.400000
LOWER IN parasitic helminthiasis infectious disease0.333333
parasitic helminthiasis infectious disease0.333333
LOWER IN day 00.333333
rice field0.333333
LOWER IN seedling0.333333
oreochromis niloticus0.333333
wistar rat0.333333
LOWER IN systemic lupus erythematosus0.333333
rice0.250000
seedling0.250000
fasting0.250000
caecum0.250000
state of georgia0.200000
oryza sativa0.200000
commonwealth of massachusetts0.200000
hunan province0.166667
rattus0.166667
czech republic0.142857
LOWER IN age0.142857
food (fermented)0.125000
cow0.125000
atlantic ocean0.125000
sweden0.100000
surface water0.100000
bos taurus0.083333
mouse0.076923
rat0.071429
mus musculus0.067797
research facility0.045045
farm0.034483
sea water0.032258
rhizosphere0.030303
united states of america0.028708
water0.018868
feces0.016461
soil0.015625
control0.013889
china0.009009
LOWER IN control0.006993
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.821429
research facility0.571429
late timepoints0.571429
LOWER IN late timepoints0.428571
texas0.428571
early timepoints0.392857
feces0.357143
LOWER IN early timepoints0.357143
mus musculus0.285714
mouse0.285714
bos taurus0.214286
cow0.214286
farm0.214286
state of georgia0.214286
colon0.214286
LOWER IN fasting0.214286
fasting0.214286
caecum0.214286
30-60 days0.178571
oreochromis niloticus0.142857
nile tilapia0.142857
water0.107143
atlantic ocean0.107143
surface water0.107143
coastal water0.107143
commonwealth of massachusetts0.107143
chitin beads0.107143
sea water0.107143
sweden0.071429
control0.071429
soil0.071429
rhizosphere0.071429
oryza sativa0.071429
rice0.071429
hunan province0.071429
rice field0.071429
china0.071429
coturnix coturnix0.071429
common quail0.071429
LOWER IN parasitic helminthiasis infectious disease0.035714
LOWER IN trichuris muris0.035714
parasitic helminthiasis infectious disease0.035714
trichuris muris0.035714
LOWER IN control0.035714
state of rhode island0.035714
kimchi0.035714
days 1-90.035714
LOWER IN day 00.035714
food (fermented)0.035714
0-2 days0.035714
LOWER IN 30-60 days0.035714
LOWER IN 0-2 days0.035714
unshaded0.035714
sunlight0.035714
LOWER IN shaded0.035714
shaded0.035714
LOWER IN unshaded0.035714
LOWER IN sunlight0.035714
LOWER IN seedling0.035714
seedling0.035714
anaxyrus terrestris0.035714
southern toad0.035714
rat0.035714
rattus0.035714
wistar rat0.035714
czech republic0.035714
age 25 weeks0.035714
LOWER IN age 35 weeks0.035714
LOWER IN age0.035714
nzb/w f10.035714
age 10-18 weeks0.035714
LOWER IN 23-33 weeks0.035714
LOWER IN systemic lupus erythematosus0.035714
Exp. ID User ID Description Date Region Flag Sequences
108amnondecreases during fasting in nile tilapia colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-07v4No1 / 3
311amnonhigher in fermneted kimchi days>1 compared to day 0 ( high in late timepoints days 1-9 compared to day 0 early timepoints in united states of america state of rhode island kimchi food (fermented) )2018-04-09v4No1 / 5
108amnonincreases during fasting in nile tilapia caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum oreochromis niloticus nile tilapia )2017-04-07v4No1 / 16
466amnonhigh freq. in cow feces left in field for 30-60 days (dominant feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 17
108amnonincreases during fasting in mouse caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum mus musculus mouse )2017-04-07v4No1 / 18
187amnonnegatively correlated with age 25-35 weeks ( high in early timepoints age 25 weeks compared to late timepoints age 35 weeks age in rat rattus research facility feces wistar rat czech republic )2017-08-23v4No1 / 22
108amnondecreases during fasting in mouse caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum mus musculus mouse )2017-04-07v4No1 / 28
108amnonincreases during fasting in mouse colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 30
108amnonincreases during fasting in quail caecum ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america caecum coturnix coturnix common quail )2017-04-07v4No1 / 32
119amnonhigher in late timepoints (>4weeks) of worm infected mice ( high in parasitic helminthiasis infectious disease trichuris muris late timepoints compared to control in mus musculus mouse feces research facility sweden )2017-04-12v4No1 / 39
108amnonincreases during fasting in southern frog colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon anaxyrus terrestris southern toad )2017-04-07v4No1 / 44
108amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 58
373amnonlower in soil of mature plants compared to seedlings ( high in early timepoints seedling compared to late timepoints in soil rhizosphere oryza sativa rice hunan province rice field china )2018-09-08v4No1 / 65
108amnondecreases during fasting in quail caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum coturnix coturnix common quail )2017-04-07v4No1 / 75
373amnonhigher in soil of mature plants compared to seedlings ( high in late timepoints compared to seedling early timepoints in soil rhizosphere oryza sativa rice hunan province rice field china )2018-09-08v4No1 / 80
108amnonincreases during fasting in nile tilapia colon ( high in fasting late timepoints compared to early timepoints in research facility texas united states of america colon oreochromis niloticus nile tilapia )2017-04-07v4No1 / 80
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 111
107amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america colon mus musculus mouse )2017-04-07v4No1 / 119
461amnonlate colonizers in chitin beads incubated in ocean water (other water, atlantic ocean, surface water, coastal water, united states of america, commonwealth of massachusetts, chitin beads, late timepoints, sea water)2019-01-12v4No1 / 119
108amnondecreases during fasting in nile tilapia caecum ( high in early timepoints compared to fasting late timepoints in research facility texas united states of america caecum oreochromis niloticus nile tilapia )2017-04-07v4No1 / 121
368amnonlower in nzb/w f1 mice late timepoints (SLE model) compared to early timepoints ( high in control early timepoints age 10-18 weeks compared to late timepoints 23-33 weeks systemic lupus erythematosus in feces united states of america mouse mus musculus research facility nzb/w f1 )2018-09-03v4No1 / 131
461amnonlower in early compared to late timepoints in chitin beads incubated in ocean water ( high in late timepoints compared to early timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 140
119amnonlower in late timepoints (>4weeks) of worm infected mice ( high in control compared to parasitic helminthiasis infectious disease trichuris muris late timepoints in mus musculus mouse feces research facility sweden )2017-04-12v4No1 / 154
461amnonhigher in early compared to late timepoints in chitin beads incubated in ocean water ( high in early timepoints compared to late timepoints in water atlantic ocean surface water coastal water united states of america commonwealth of massachusetts chitin beads sea water )2019-01-12v4No1 / 159
466amnoncommon in cow feces left in field for 30-60 days (common feces, bos taurus, cow, farm, united states of america, state of georgia, late timepoints, 30-60 days)2019-01-14v4No1 / 220
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces bos taurus cow farm united states of america state of georgia late timepoints 30-60 days )2019-01-14v4No1 / 431
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 661
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces bos taurus cow farm united states of america state of georgia )2019-01-14v4No1 / 1328

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