Summary for ontology term: late timepoints

Number of annotations with term: 28

Annotations:

common ontology terms
term enrichment score
TermScore
late timepoints0.685714
LOWER IN late timepoints0.578313
early timepoints0.522034
LOWER IN early timepoints0.476190
texas0.461538
state of georgia0.300000
LOWER IN fasting0.279070
30-60 days0.263158
cow0.230769
fasting0.230769
nile tilapia0.222222
oreochromis niloticus0.200000
commonwealth of massachusetts0.176471
chitin beads0.176471
coastal water0.176471
bos taurus0.157895
colon0.157895
mouse0.137931
surface water0.130435
common quail0.125000
rice field0.125000
coturnix coturnix0.125000
mus musculus0.123077
atlantic ocean0.122449
farm0.107143
hunan province0.105263
rice0.105263
research facility0.101266
oryza sativa0.100000
sweden0.100000
ocean water0.093750
caecum0.081081
united states of america0.071299
LOWER IN 23-33 weeks0.066667
LOWER IN 30-60 days0.066667
LOWER IN age 35 weeks0.066667
trichuris muris0.066667
anaxyrus terrestris0.066667
0-2 days0.066667
sunlight0.066667
age 25 weeks0.066667
nzb/w f10.066667
shaded0.066667
LOWER IN trichuris muris0.066667
age 10-18 weeks0.066667
LOWER IN shaded0.066667
southern toad0.066667
LOWER IN unshaded0.066667
LOWER IN 0-2 days0.066667
unshaded0.066667
kimchi0.066667
LOWER IN sunlight0.066667
state of rhode island0.066667
days 1-90.066667
LOWER IN systemic lupus erythematosus0.064516
wistar rat0.064516
LOWER IN parasitic helminthiasis infectious disease0.064516
LOWER IN seedling0.064516
parasitic helminthiasis infectious disease0.064516
LOWER IN day 00.064516
seedling0.064516
czech republic0.062500
LOWER IN age0.058824
rattus0.058824
fermented food product0.058824
rat0.050000
rhizosphere0.048780
water0.047244
feces0.043908
soil0.032787
control0.030075
china0.022989
LOWER IN control0.015267
Fraction of dbbact annotations with this term covered by the query
TermScore
LOWER IN late timepoints0.888889
late timepoints0.857143
early timepoints0.777778
LOWER IN early timepoints0.714286
LOWER IN 23-33 weeks0.500000
LOWER IN 30-60 days0.500000
LOWER IN age 35 weeks0.500000
30-60 days0.500000
anaxyrus terrestris0.500000
commonwealth of massachusetts0.500000
common quail0.500000
0-2 days0.500000
trichuris muris0.500000
texas0.500000
sunlight0.500000
age 25 weeks0.500000
nile tilapia0.500000
nzb/w f10.500000
shaded0.500000
days 1-90.500000
coturnix coturnix0.500000
LOWER IN trichuris muris0.500000
unshaded0.500000
age 10-18 weeks0.500000
LOWER IN shaded0.500000
southern toad0.500000
chitin beads0.500000
LOWER IN unshaded0.500000
state of georgia0.500000
coastal water0.500000
rice field0.500000
LOWER IN 0-2 days0.500000
kimchi0.500000
LOWER IN sunlight0.500000
state of rhode island0.500000
LOWER IN fasting0.400000
LOWER IN systemic lupus erythematosus0.333333
LOWER IN parasitic helminthiasis infectious disease0.333333
oreochromis niloticus0.333333
wistar rat0.333333
seedling0.333333
parasitic helminthiasis infectious disease0.333333
LOWER IN day 00.333333
LOWER IN seedling0.333333
czech republic0.250000
fasting0.250000
cow0.250000
hunan province0.200000
rice0.200000
surface water0.166667
LOWER IN age0.166667
oryza sativa0.166667
rattus0.166667
sweden0.166667
fermented food product0.166667
atlantic ocean0.142857
bos taurus0.125000
colon0.125000
mouse0.090909
ocean water0.083333
rat0.083333
mus musculus0.078431
farm0.071429
research facility0.055556
caecum0.050000
united states of america0.037267
rhizosphere0.037037
water0.030303
feces0.023392
soil0.021277
control0.019048
china0.013699
LOWER IN control0.009709
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.821429
research facility0.571429
late timepoints0.571429
LOWER IN late timepoints0.428571
texas0.428571
early timepoints0.392857
feces0.357143
LOWER IN early timepoints0.357143
mouse0.285714
mus musculus0.285714
caecum0.214286
bos taurus0.214286
farm0.214286
colon0.214286
LOWER IN fasting0.214286
state of georgia0.214286
cow0.214286
fasting0.214286
30-60 days0.178571
nile tilapia0.142857
oreochromis niloticus0.142857
surface water0.107143
water0.107143
commonwealth of massachusetts0.107143
ocean water0.107143
atlantic ocean0.107143
chitin beads0.107143
coastal water0.107143
hunan province0.071429
rhizosphere0.071429
common quail0.071429
china0.071429
oryza sativa0.071429
soil0.071429
rice field0.071429
control0.071429
rice0.071429
coturnix coturnix0.071429
sweden0.071429
LOWER IN 23-33 weeks0.035714
LOWER IN 30-60 days0.035714
LOWER IN age 35 weeks0.035714
trichuris muris0.035714
czech republic0.035714
LOWER IN systemic lupus erythematosus0.035714
wistar rat0.035714
LOWER IN age0.035714
anaxyrus terrestris0.035714
0-2 days0.035714
LOWER IN parasitic helminthiasis infectious disease0.035714
sunlight0.035714
age 25 weeks0.035714
nzb/w f10.035714
shaded0.035714
LOWER IN seedling0.035714
LOWER IN trichuris muris0.035714
age 10-18 weeks0.035714
LOWER IN shaded0.035714
southern toad0.035714
rattus0.035714
parasitic helminthiasis infectious disease0.035714
LOWER IN control0.035714
LOWER IN unshaded0.035714
LOWER IN day 00.035714
rat0.035714
seedling0.035714
LOWER IN 0-2 days0.035714
unshaded0.035714
fermented food product0.035714
kimchi0.035714
LOWER IN sunlight0.035714
state of rhode island0.035714
days 1-90.035714
Exp. ID User ID Description Date Sequences
108amnondecreases during fasting in nile tilapia colon ( high in early timepoints compared to fasting late timepoints in united states of america research facility colon oreochromis niloticus texas nile tilapia )2017-04-071 / 4
311amnonhigher in fermneted kimchi days>1 compared to day 0 ( high in late timepoints days 1-9 compared to early timepoints day 0 in united states of america fermented food product state of rhode island kimchi )2018-04-091 / 6
108amnonincreases during fasting in nile tilapia caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum oreochromis niloticus texas nile tilapia )2017-04-071 / 17
466amnonhigh freq. in cow feces left in field for 30-60 days (highfreq feces, united states of america, farm, bos taurus, state of georgia, cow, late timepoints, 30-60 days)2019-01-141 / 18
108amnonincreases during fasting in mouse caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum mus musculus texas mouse )2017-04-071 / 19
187amnonnegatively correlated with age 25-35 weeks ( high in early timepoints age 25 weeks compared to age late timepoints age 35 weeks in feces research facility rattus czech republic rat wistar rat )2017-08-231 / 23
108amnondecreases during fasting in mouse caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum mus musculus texas mouse )2017-04-071 / 29
108amnonincreases during fasting in mouse colon ( high in fasting late timepoints compared to early timepoints in united states of america research facility colon mus musculus texas mouse )2017-04-071 / 31
108amnonincreases during fasting in quail caecum ( high in fasting late timepoints compared to early timepoints in united states of america research facility caecum texas coturnix coturnix common quail )2017-04-071 / 33
119amnonhigher in late timepoints (>4weeks) of worm infected mice ( high in parasitic helminthiasis infectious disease late timepoints trichuris muris compared to control in feces research facility mus musculus sweden mouse )2017-04-121 / 40
108amnonincreases during fasting in southern frog colon ( high in fasting late timepoints compared to early timepoints in united states of america research facility colon texas anaxyrus terrestris southern toad )2017-04-071 / 45
108amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in united states of america research facility colon mus musculus texas mouse )2017-04-071 / 59
373amnonlower in soil of mature plants compared to seedlings ( high in seedling early timepoints compared to late timepoints in china rice field soil rhizosphere oryza sativa hunan province rice )2018-09-081 / 66
108amnondecreases during fasting in quail caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum texas coturnix coturnix common quail )2017-04-071 / 76
108amnonincreases during fasting in nile tilapia colon ( high in fasting late timepoints compared to early timepoints in united states of america research facility colon oreochromis niloticus texas nile tilapia )2017-04-071 / 81
373amnonhigher in soil of mature plants compared to seedlings ( high in late timepoints compared to seedling early timepoints in china rice field soil rhizosphere oryza sativa hunan province rice )2018-09-081 / 81
466amnonlower in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in unshaded sunlight compared to shaded in feces united states of america farm bos taurus state of georgia cow late timepoints 30-60 days )2019-01-141 / 112
461amnonlate colonizers in chitin beads incubated in ocean water (other united states of america, water, surface water, coastal water, ocean water, atlantic ocean, commonwealth of massachusetts, late timepoints, chitin beads)2019-01-121 / 120
107amnondecreases during fasting in mouse colon ( high in early timepoints compared to fasting late timepoints in united states of america research facility colon mus musculus texas mouse )2017-04-071 / 120
108amnondecreases during fasting in nile tilapia caecum ( high in early timepoints compared to fasting late timepoints in united states of america research facility caecum oreochromis niloticus texas nile tilapia )2017-04-071 / 122
368amnonlower in nzb/w f1 mice late timepoints (SLE model) compared to early timepoints ( high in control early timepoints age 10-18 weeks compared to systemic lupus erythematosus late timepoints 23-33 weeks in feces united states of america research facility mus musculus mouse nzb/w f1 )2018-09-031 / 132
461amnonlower in early compared to late timepoints in chitin beads incubated in ocean water ( high in late timepoints compared to early timepoints in united states of america water surface water coastal water ocean water atlantic ocean commonwealth of massachusetts chitin beads )2019-01-121 / 141
119amnonlower in late timepoints (>4weeks) of worm infected mice ( high in control compared to parasitic helminthiasis infectious disease late timepoints trichuris muris in feces research facility mus musculus sweden mouse )2017-04-121 / 155
461amnonhigher in early compared to late timepoints in chitin beads incubated in ocean water ( high in early timepoints compared to late timepoints in united states of america water surface water coastal water ocean water atlantic ocean commonwealth of massachusetts chitin beads )2019-01-121 / 160
466amnoncommon in cow feces left in field for 30-60 days (common feces, united states of america, farm, bos taurus, state of georgia, cow, late timepoints, 30-60 days)2019-01-141 / 221
466amnonhigher in shaded compared to unshaded samples in cow feces left in field for 30-60 days ( high in shaded compared to unshaded sunlight in feces united states of america farm bos taurus state of georgia cow late timepoints 30-60 days )2019-01-141 / 432
466amnonhigher in cow feces left in field for 30-60 days compared to initial feces ( high in late timepoints 30-60 days compared to early timepoints 0-2 days in feces united states of america farm bos taurus state of georgia cow )2019-01-141 / 662
466amnonlower in cow feces left in field for 30-60 days compared to initial feces ( high in early timepoints 0-2 days compared to late timepoints 30-60 days in feces united states of america farm bos taurus state of georgia cow )2019-01-141 / 1329

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