Summary for ontology term: leaf endosphere

Number of annotations with term: 14

Top positive-associated sequence

Taxonomy Sequence Recall
d__BacteriaGACAAGGGAGACGAGTGTTAATCATCTTTAACAGGTATATAGGGTACCTAGACGGTGTGCAAAGGCTTATTAAAGTACCTGCCACACTCGAGTTTGATATGTGAGAGGAAGATGTCAGAATTATTGGAGTACGGATGAAATCGGCTAATA0.071429
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__AcinetobacterTACAGAGGGTGCGAGCGTTAATCGGATTTACTGGGCGTAAAGCGTGCGTAGGCGGCTTCTTAAGTCGGATGTGAAATCCCTGAGCTTAACTTAGGAATTGCATTCGATACTGGGAAGCTAGAGTATGGGAGAGGATGGTAGAATTCCAGG0.071429
d__BacteriaTACGTAAGAGACTAGTGTTATTCATCTTAATTAGGTTTAAAGGGTACCTAGACGGTCAATATAGCTTCTAGAATGTTAGTACTTGACTAGAGTTTTATGTAAGAGGGCAGTACTTGAGGAGGAGAGATGAAATTCTATGATACCAAAGGG0.071429
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__Pseudomonadales;f__Moraxellaceae;g__AcinetobacterTACAGAGGGTGCAAGCGTTAATCGGATTTACTGGGCGTAAAGCGCGCGTAGGTGGCCAATTAAGTCAAATGTGAAATCCCCGAGCTTAACTTGGGAATTGCATTCGATACTGGTTGGCTAGAGTATGGGAGAGGATGGTAGAATTCCAGG0.071429
d__BacteriaTTCCAGCTCCAATAGCGTATATTAAAGTTGTTGCAGTTAAAAAGCTCGTAGTTGAAGTTTGGTCTCGGACGCTGGGTCTGCTTAATTGCATGTACTTGACGGTCCGAGACTTCCTTCTTGGTGAACGGCCGCCTTCGGGTGGTCCGGAAC0.071429
d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__Oxalobacteraceae;g__HerbaspirillumTACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAATTGCATTTGAGACTGCACGGCTAGAGTGTGTCAGAGGGGGGGAGAATTCCACG0.071429
d__BacteriaCAAAGTTGTCCAACGTCTCCCCTTGCTTTTGCATGCTCTCTGTTCTTCACTAAACCTCACCGAACGTGCAGGAATCCCTGCCGGTAGCTATGCAAGTCAACCGCTATCTCCGTCCGGTCTCCGGCCCAGGTTGAAGCCCTAGGTGAGCCC0.071429
TACAAGTGACTAGAAACTCGATGTGTCTCTTTCGGAAATATGAGATAAGGACCGGGACTTTTATTCTCGTAGCGGGGAGGAAGAAGGCTAGCCAAAGAACTCATGAGACGGAGTAGTGAAGGGACAGTAGCTGACAAGATTAAAGCCAAC0.071429
d__BacteriaGACGAGGGGGGCAAGTGTTGAAAGTGAAAGTCACCAAAAAGTAGGCGGTGAATCGGGTTGAAAGTGAAAGTCACCAAAAAGTGGCGGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCATGTGTAGGGGG0.071429
d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__OxalobacteraceaeTACGTAGGGTGCAAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTGTGTAAGTCAGATGTGAAATCCCCGGGCTCAACCTGGGAATTGCATTTGAGACTGCACGGCTAGAGGGTGTCAGAGGGGGGGAGAATTCCACG0.071429

Top negative-associated sequence

Taxonomy Sequence Recall
d__Bacteria;p__"Proteobacteria";c__Gammaproteobacteria;o__Pasteurellales;f__PasteurellaceaeTACGGAGGGTGCGAGCGTTAATCGGAATAACTGGGCGTAAAGGGCACGCAGGCGGTGACTTAAGTGAGGTGTGAAAGCCCCGGGCTTAACCTGGGAATTGCATTTCATACTGGGTCGCTAGAGTACTTTAGGGAGGGGTAGAATTCCACG0.500000
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Caulobacterales;f__Caulobacteraceae;g__CaulobacterTACGAAGGGGGCTAGCGTTGCTCGGAATTACTGGGCGTAAAGGGAGCGTAGGCGGACTGTTAAGTTAGAGGTGAAAGCCCAGGGCTCAACCTTGGAATTGCCTTTGATACTGGCAGTCTTGAGTACGGAAGAGGTATGTGGAACTCCGAG0.500000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__StreptococcusTACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTACGCTTTGGAAACTGTTTAACTTGAGTGCAAGAGGGGAGAGTGGAATTCCATGT0.500000
d__BacteriaTACGTAGAAGACTAGTGTTAGTCATCTTTATTAGGTTTAAAGGGTACCTAGACGGTAAATTAAACTCTAAATGAGTACTTTTTTACTAGAGTTTTATGTGAGAAGGAAGAATTTCTGGAGTAGGGATGAAATACTTTGATACCAGAAGGA0.500000
d__Bacteria;p__"Actinobacteria";c__Actinobacteria;o__Actinomycetales;f__Actinomycetaceae;g__ActinomycesTACGTAGGGCGCGAGCGTTGTCCGGAATTATTGGGCGTAAAGAGCTCGTAGGCGGCTGGTCGCGTCTGTCGTGAAATCCTCTGGCTTAACTGGGGGCTTGCGGTGGGTACGGGCCGGCTTGAGTGCGGTAGGGGAGACTGGAACTCCTGG0.500000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__LactococcusTACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGTGGTTTATTAAGTCTGGTGTAAAAGGCAGTGGCTCAACCATTGTATGCATTGGAAACTGGTAGACTTGAGTGCAGGAGAGGAGAGTGGAATTCCATGT0.500000
d__Bacteria;p__Firmicutes;c__Bacilli;o__Lactobacillales;f__Streptococcaceae;g__StreptococcusTACGTAGGTCCCGAGCGTTGTCCGGATTTATTGGGCGTAAAGCGAGCGCAGGCGGTTAGATAAGTCTGAAGTTAAAGGCTGTGGCTTAACCATAGTATGCTTTGGAAACTGTTTAACTTGAGTGCAGAAGGGGAGAGTGGAATTCCATGT0.500000
d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__CupriavidusTACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTTTTGTAAGACAGGCGTGAAATCCCCGGGCTTAACCTGGGAATTGCGCTTGTGACTGCAAGGCTAGAGTGCGTCAGAGGGGGGTAGAATTCCACG0.500000
d__Bacteria;p__"Acidobacteria";c__Acidobacteria_Gp1;g__TerriglobusTACGAGGGGGGCAAGCGTTGTTCGGAATTATTGGGCGTAAAGGGCGCGTAGGCGGTTTGGCAAGTTTGGTGTGAAATCTTCGGGCTCAACTCGAAGTCTGCACCGAAAACTGCCGGGCTTGAGTATGGGAGAGGTGAGTGGAATTTCCGG0.500000
d__BacteriaCACGATTAACCCAAGTCAATAGAAGCCGGCGTAAAGAGTGTTTTAGATCACCCCCTCCCCAATAAAGCTAAAACTCACCTGAGTTGTAAAAAACTCCAGTTGACACAAAATAGACTACGAAAGTGGCTTTAACATATCTGAACACACAAT0.500000

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCCCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.642857
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAATCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.592593
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTTAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.551724
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGTTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.538462
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACTCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.533333
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCTTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.480000
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGACTCAACCCTGGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGG0.476190
d__Bacteria;p__Cyanobacteria/Chloroplast;c__Chloroplast;f__Chloroplast;g__StreptophytaGACAGAGGATGCAAGCGTTATCCGGAATGATTGGGCGTAAAGCGTCTGTAGGTGGCTTTTCAAGTCCGCCGTCAAATCCCAGGGCTCAACCCTGACAGGCGGTGGAAACTACCAAGCTGGAGTACGGTAGGGGCAGAGGGAATTTCCGGT0.454545
d__BacteriaGACAAGGGGGGTGTTCTTCAAAATGACTGGGCGTAAAAGGCACATAGGCGATAAATCGGGTTGAAAGTGAAAGTCGCCAAAAACTGGCAGAATGCTCTCGAAACCAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCATGTGTAAG0.380952
d__BacteriaGACGAGGGGGGAGTGTTCTTCGGAATGACTGGGCGTAAAGGGTACATAGGCGGTAAATCGGGTTGAAAGTGAAAGTCGCCAAAAACTGGCGGAATGCTCTCGAAACTAATTCACTTGAGTGAGACAGAGGAGAGTGGAATTTCATGTGTA0.315789

Annotations:

common ontology terms
term enrichment score
TermScore
leaf endosphere0.829787
agave0.461538
guanajuato0.363636
minas gerais state0.363636
campos rupestres0.363636
campinas0.363636
saccharum0.307692
sugarcane0.307692
endosphere0.266667
leaf0.247619
agave deserti0.222222
agave salmiana0.222222
agave tequiliana0.222222
vellozia epidendroides0.222222
barbacenia macrantha0.222222
greenhouse0.210526
desert0.193548
brazil0.177778
mexico0.160000
cultivated environment0.133333
upper stem0.125000
LOWER IN upper stem0.125000
stem endosphere0.117647
LOWER IN stem endosphere0.117647
LOWER IN leaf endosphere0.111111
stem0.095238
LOWER IN stem0.095238
state of california0.058824
LOWER IN leaf0.057143
Fraction of dbbact annotations with this term covered by the query
TermScore
leaf endosphere0.750000
agave0.500000
agave deserti0.500000
agave salmiana0.500000
guanajuato0.500000
agave tequiliana0.500000
minas gerais state0.500000
campos rupestres0.500000
vellozia epidendroides0.500000
upper stem0.500000
campinas0.500000
LOWER IN upper stem0.500000
barbacenia macrantha0.500000
stem endosphere0.333333
saccharum0.333333
sugarcane0.333333
LOWER IN stem endosphere0.333333
LOWER IN leaf endosphere0.250000
endosphere0.250000
greenhouse0.166667
leaf0.142857
stem0.142857
LOWER IN stem0.142857
desert0.125000
cultivated environment0.125000
mexico0.111111
brazil0.105263
LOWER IN leaf0.047619
state of california0.037037
Fraction of annotations for the query sequences containing the term
TermScore
leaf0.928571
leaf endosphere0.928571
brazil0.571429
agave0.428571
desert0.428571
guanajuato0.285714
mexico0.285714
minas gerais state0.285714
campos rupestres0.285714
endosphere0.285714
saccharum0.285714
sugarcane0.285714
campinas0.285714
greenhouse0.285714
agave deserti0.142857
state of california0.142857
agave salmiana0.142857
agave tequiliana0.142857
cultivated environment0.142857
vellozia epidendroides0.142857
barbacenia macrantha0.142857
LOWER IN leaf endosphere0.071429
LOWER IN leaf0.071429
stem endosphere0.071429
upper stem0.071429
stem0.071429
LOWER IN upper stem0.071429
LOWER IN stem endosphere0.071429
LOWER IN stem0.071429
Exp. ID User ID Description Date Region Flag Sequences
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf endosphere2019-08-17v4No1 / 12
615amnondominant leaf endosphere, leaf, endosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 13
360amnondominant agave salmiana, agave, leaf, leaf endosphere, desert, guanajuato, mexico2018-08-21v4No1 / 15
360amnondominant agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated environment2018-08-21v4No1 / 16
548amnondominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf, leaf endosphere2019-08-17v4No1 / 17
360amnondominant agave, agave deserti, leaf, leaf endosphere, desert, state of california2018-08-20v4No1 / 30
360amnoncommon agave salmiana, agave, leaf, leaf endosphere, desert, guanajuato, mexico2018-08-21v4No1 / 39
360amnoncommon agave, agave deserti, leaf, leaf endosphere, desert, state of california2018-08-20v4No1 / 48
360amnoncommon agave, leaf, leaf endosphere, desert, guanajuato, mexico, agave tequiliana, cultivated environment2018-08-21v4No1 / 78
615amnon high in leaf endosphere leaf compared to upper stem stem endosphere stem in endosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 118
615amnoncommon leaf endosphere, leaf, endosphere, saccharum, sugarcane, campinas, brazil, greenhouse2020-04-27v4No1 / 122
615amnon high in stem endosphere upper stem stem compared to leaf endosphere leaf in endosphere saccharum sugarcane campinas brazil greenhouse 2020-04-27v4No1 / 153
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf endosphere2019-08-17v4No1 / 164
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf, leaf endosphere2019-08-17v4No1 / 243

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