Summary for ontology term: left colon

Number of annotations with term: 12

Annotations:

common ontology terms
term enrichment score
TermScore
left colon0.656250
right colon0.545455
LOWER IN left colon0.535714
LOWER IN right colon0.428571
LOWER IN jejunum0.363636
biopsy site0.285714
jejunum0.266667
biopsy0.250000
gastrointestinal system0.250000
ileum0.250000
LOWER IN caecum0.250000
transverse colon0.250000
LOWER IN duodenum0.250000
LOWER IN ileum0.200000
duodenum0.190476
sus scrofa0.175439
pig0.175439
united kingdom0.175439
caecum0.142857
LOWER IN transverse colon0.142857
LOWER IN stomach0.105263
stomach0.083333
colon0.080000
LOWER IN feces0.074074
mus musculus0.033333
adult0.024096
united states of america0.021228
homo sapiens0.012658
feces0.009479
Fraction of dbbact annotations with this term covered by the query
TermScore
left colon0.750000
LOWER IN left colon0.750000
jejunum0.666667
LOWER IN jejunum0.666667
LOWER IN right colon0.600000
right colon0.600000
LOWER IN transverse colon0.500000
transverse colon0.500000
biopsy site0.250000
gastrointestinal system0.250000
ileum0.250000
LOWER IN duodenum0.250000
LOWER IN ileum0.250000
duodenum0.222222
biopsy0.200000
LOWER IN caecum0.200000
LOWER IN stomach0.142857
sus scrofa0.111111
pig0.111111
united kingdom0.111111
caecum0.090909
stomach0.083333
LOWER IN feces0.066667
colon0.052632
mus musculus0.017857
adult0.012987
united states of america0.010811
homo sapiens0.006452
feces0.005025
Fraction of annotations for the query sequences containing the term
TermScore
united states of america0.583333
left colon0.583333
right colon0.500000
LOWER IN left colon0.416667
sus scrofa0.416667
pig0.416667
united kingdom0.416667
homo sapiens0.333333
biopsy0.333333
biopsy site0.333333
LOWER IN caecum0.333333
LOWER IN right colon0.333333
caecum0.333333
mus musculus0.250000
gastrointestinal system0.250000
ileum0.250000
LOWER IN duodenum0.250000
LOWER IN jejunum0.250000
adult0.166667
duodenum0.166667
jejunum0.166667
transverse colon0.166667
LOWER IN ileum0.166667
colon0.166667
stomach0.083333
LOWER IN transverse colon0.083333
LOWER IN feces0.083333
feces0.083333
LOWER IN stomach0.083333
Exp. ID User ID Description Date Region Flag Sequences
14amnonmuch higher in right and transverse colon compared to other GI tract ( high in right colon transverse colon compared to left colon caecum in mus musculus united states of america gastrointestinal system )2016-11-08v4No1 / 1
256amnonhigher in illeum compared to other gi tract locations in pigs ( high in ileum compared to duodenum jejunum caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 1
409amnon high in right colon compared to left colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / 1
409amnonhighfreq homo sapiens, united states of america, adult, left colon, biopsy, biopsy site2018-11-22v4No1 / 15
409amnon high in left colon compared to right colon in homo sapiens united states of america colon biopsy biopsy site 2018-11-22v4No1 / 15
256amnonhighfreq sus scrofa, pig, caecum, right colon, left colon, united kingdom2017-11-26v4No1 / 19
14amnon high in stomach duodenum jejunum ileum compared to caecum right colon transverse colon left colon feces in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 42
14amnon high in caecum right colon transverse colon left colon feces compared to stomach duodenum jejunum ileum in mus musculus united states of america gastrointestinal system 2016-11-08v4No1 / 51
409amnoncommon homo sapiens, united states of america, adult, left colon, biopsy, biopsy site2018-11-22v4No1 / 118
256amnonhigher in small intestine compared to colon in pigs ( high in duodenum jejunum ileum compared to caecum right colon left colon in sus scrofa pig united kingdom )2017-11-26v4No1 / 387
256amnoncommon sus scrofa, pig, caecum, right colon, left colon, united kingdom2017-11-26v4No1 / 490
256amnonlower in small intestine compared to colon in pigs ( high in caecum right colon left colon compared to duodenum jejunum ileum in sus scrofa pig united kingdom )2017-11-26v4No1 / 740

Problems / suggestions? Please email info AT dbbact DOT org