Summary for ontology term: marmosets

Number of annotations with term: 18

Top positive-associated sequence

Taxonomy Sequence Recall

Top negative-associated sequence

Taxonomy Sequence Recall

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score

Annotations:

common ontology terms
Fraction of dbbact annotations with this term covered by the query
TermScore
marmosets2.000000
callithrix <genus>1.000000
callithrix jacchus1.000000
LOWER IN new england source (neprc)1.000000
japanese source (clea)1.000000
LOWER IN japanese source (clea)1.000000
new england source (neprc)1.000000
anal swab0.500000
boston0.500000
rectal swab0.200000
LOWER IN rectal swab0.200000
monkey0.133333
commonwealth of massachusetts0.111111
captive0.095238
zoological garden0.066667
LOWER IN zoological garden0.066667
brazil0.052632
LOWER IN captive0.047619
wild0.038462
LOWER IN wild0.038462
LOWER IN inflammatory bowel disease0.033333
inflammatory bowel disease0.033333
research facility0.006173
feces0.005797
control0.005263
LOWER IN control0.005263
united states of america0.003861
LOWER IN feces0.002899
Fraction of annotations for the query sequences containing the term
TermScore
monkey1.000000
marmosets1.000000
captive0.833333
feces0.611111
research facility0.555556
callithrix jacchus0.555556
anal swab0.444444
callithrix <genus>0.444444
brazil0.444444
rectal swab0.388889
zoological garden0.166667
wild0.166667
LOWER IN inflammatory bowel disease0.111111
inflammatory bowel disease0.111111
boston0.111111
commonwealth of massachusetts0.111111
united states of america0.111111
LOWER IN zoological garden0.055556
LOWER IN captive0.055556
LOWER IN wild0.055556
control0.055556
LOWER IN control0.055556
LOWER IN new england source (neprc)0.055556
japanese source (clea)0.055556
LOWER IN japanese source (clea)0.055556
new england source (neprc)0.055556
LOWER IN feces0.055556
LOWER IN rectal swab0.055556
Exp. ID User ID Description Date Region Flag Sequences
978amnon high in feces compared to rectal swab in monkey callithrix jacchus marmosets captive research facility united states of america commonwealth of massachusetts boston 2022-12-24v4No1 / 1
978amnon high in rectal swab compared to feces in boston commonwealth of massachusetts united states of america research facility captive marmosets callithrix jacchus monkey 2022-12-24v4No1 / 3
974amnondominant anal swab, zoological garden, captive, brazil, feces, marmosets, callithrix <genus>, monkey2022-12-24v4No1 / 14
974amnon high in captive zoological garden compared to wild in anal swab brazil feces marmosets callithrix <genus> monkey 2022-12-24v4No1 / 16
978amnon high in control compared to inflammatory bowel disease inflammatory bowel disease in rectal swab research facility captive marmosets callithrix jacchus monkey 2022-12-24v4No1 / 16
974amnondominant in feces of marmosets reintroduced to the wild (dominant anal swab, captive, brazil, feces, marmosets, callithrix <genus>, monkey)2022-12-24v4No1 / 18
974amnondominant monkey, callithrix <genus>, marmosets, feces, brazil, anal swab, wild2022-12-24v4No1 / 19
978amnon high in inflammatory bowel disease inflammatory bowel disease compared to control in monkey callithrix jacchus marmosets captive research facility rectal swab 2022-12-24v4No1 / 21
978amnondominant feces, monkey, callithrix jacchus, marmosets, captive, research facility2022-12-24v4No1 / 23
978amnondominant monkey, callithrix jacchus, marmosets, captive, research facility, rectal swab2022-12-24v4No1 / 24
974amnon high in wild compared to zoological garden captive in monkey callithrix <genus> marmosets feces brazil anal swab 2022-12-24v4No1 / 32
974amnoncommon wild, anal swab, brazil, feces, marmosets, callithrix <genus>, monkey2022-12-24v4No1 / 33
974amnoncommon anal swab, monkey, callithrix <genus>, marmosets, feces, brazil, captive, zoological garden2022-12-24v4No1 / 44
978amnoncommon research facility, captive, marmosets, callithrix jacchus, monkey, feces2022-12-24v4No1 / 60
978amnoncommon rectal swab, research facility, captive, marmosets, callithrix jacchus, monkey2022-12-24v4No1 / 69
974amnoncommon in feces of marmosets reintroduced to the wild (common anal swab, captive, brazil, feces, marmosets, callithrix <genus>, monkey)2022-12-24v4No1 / 78
978amnon high in japanese source (clea) compared to new england source (neprc) in rectal swab research facility captive marmosets callithrix jacchus monkey 2022-12-24v4No1 / 91
978amnon high in new england source (neprc) compared to japanese source (clea) in monkey callithrix jacchus marmosets captive research facility rectal swab 2022-12-24v4No1 / 128

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