Summary for ontology term: mesoderm-derived structure

Number of annotations with term: 28

Annotations:

common ontology terms
term enrichment score
TermScore
vagina0.845070
phoenix0.363636
pregnancy0.294118
south africa0.285714
state of arizona0.266667
penis0.222222
male organism0.222222
dysplasia of cervix0.176471
female0.137405
male0.125000
invasive carcinoma0.125000
invasive cervical carcinoma0.125000
cervical carcinoma0.125000
state of michigan0.095238
pig0.086957
sus scrofa0.086957
LOWER IN premature birth0.066667
LOWER IN caucasian0.066667
african american0.066667
african0.066667
caucasian0.066667
LOWER IN african0.066667
LOWER IN african american0.066667
LOWER IN bacterial vaginosis0.066667
bacterial vaginosis0.066667
LOWER IN dysplasia of cervix0.066667
LOWER IN last trimester0.066667
last trimerster0.066667
LOWER IN first trimester0.066667
premature birth0.066667
first trimester0.064516
skin0.058824
old age0.058824
LOWER IN young age0.058824
LOWER IN old age0.055556
young age0.055556
homo sapiens0.053652
farm0.047619
adult0.038961
united states of america0.038911
control0.038023
LOWER IN control0.035714
Fraction of dbbact annotations with this term covered by the query
TermScore
vagina0.833333
LOWER IN premature birth0.500000
LOWER IN caucasian0.500000
african american0.500000
african0.500000
caucasian0.500000
LOWER IN african0.500000
LOWER IN african american0.500000
LOWER IN bacterial vaginosis0.500000
bacterial vaginosis0.500000
penis0.500000
male organism0.500000
phoenix0.500000
invasive carcinoma0.500000
invasive cervical carcinoma0.500000
cervical carcinoma0.500000
dysplasia of cervix0.500000
LOWER IN dysplasia of cervix0.500000
LOWER IN last trimester0.500000
last trimerster0.500000
LOWER IN first trimester0.500000
premature birth0.500000
first trimester0.333333
south africa0.285714
pregnancy0.250000
state of arizona0.250000
old age0.166667
LOWER IN young age0.166667
state of michigan0.142857
LOWER IN old age0.125000
young age0.125000
male0.111111
pig0.111111
sus scrofa0.111111
female0.076923
skin0.037037
farm0.035714
homo sapiens0.027624
LOWER IN control0.021429
control0.021277
adult0.020408
united states of america0.020000
Fraction of annotations for the query sequences containing the term
TermScore
homo sapiens0.928571
vagina0.857143
united states of america0.714286
female0.642857
adult0.428571
pregnancy0.357143
south africa0.285714
phoenix0.285714
state of arizona0.285714
control0.178571
penis0.142857
skin0.142857
male organism0.142857
male0.142857
LOWER IN control0.107143
dysplasia of cervix0.107143
pig0.071429
sus scrofa0.071429
state of michigan0.071429
farm0.071429
invasive carcinoma0.071429
invasive cervical carcinoma0.071429
cervical carcinoma0.071429
LOWER IN premature birth0.035714
LOWER IN caucasian0.035714
african american0.035714
african0.035714
caucasian0.035714
LOWER IN african0.035714
LOWER IN african american0.035714
LOWER IN bacterial vaginosis0.035714
bacterial vaginosis0.035714
old age0.035714
LOWER IN young age0.035714
LOWER IN old age0.035714
young age0.035714
LOWER IN dysplasia of cervix0.035714
first trimester0.035714
LOWER IN last trimester0.035714
last trimerster0.035714
LOWER IN first trimester0.035714
premature birth0.035714
Exp. ID User ID Description Date Region Flag Sequences
606amnonnegatively correlated with age in human penis skin ( high in young age compared to old age in penis skin adult south africa homo sapiens male organism male )2020-04-15v3No1 / 1
191amnondecreases during pregnancy ( high in first trimester compared to last trimester in homo sapiens vagina female united states of america pregnancy )2017-09-05v4No1 / 3
528amnoncommon homo sapiens, female, vagina, pregnancy, united states of america2019-07-14v1No1 / 5
535amnoncommon in healthy adult vaginal samples (common homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, control)2019-07-25v4No1 / 7
191amnonincreases during pregnancy ( high in last trimerster compared to first trimester in homo sapiens vagina female united states of america pregnancy )2017-09-05v4No1 / 7
535amnon high in dysplasia of cervix compared to control in homo sapiens vagina female adult united states of america phoenix state of arizona 2019-07-25v4No1 / 9
535amnonhigh freq. in healthy adult vaginal samples (dominant homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, control)2019-07-25v4No1 / 11
535amnoncommon in adult vaginal samples with ICC (common homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, invasive carcinoma, invasive cervical carcinoma, cervical carcinoma)2019-07-25v4No1 / 11
535amnonhcommon in adult vaginal samples with cervical dysplasia (common homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, dysplasia of cervix)2019-07-25v4No1 / 11
191amnondominant homo sapiens, vagina, female, united states of america, pregnancy2017-09-05v4No1 / 11
389amnondominant pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-04v4No1 / 13
528amnondominant homo sapiens, female, vagina, pregnancy, united states of america2019-07-14v1No1 / 16
606amnonpositively correlated with age in human penis skin ( high in old age compared to young age in penis skin adult south africa homo sapiens male organism male )2020-04-15v3No1 / 16
213amnondominant homo sapiens, south africa, vagina2017-10-22v4No1 / 16
535amnonhigh freq. in adult vaginal samples with cervical dysplasia (dominant homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, dysplasia of cervix)2019-07-25v4No1 / 16
535amnon high in control compared to dysplasia of cervix in homo sapiens vagina female adult united states of america phoenix state of arizona 2019-07-25v4No1 / 16
606amnondominant penis, skin, adult, south africa, homo sapiens, male organism, male2020-04-15v3No1 / 17
535amnonhigh freq. in adult vaginal samples with ICC (dominant homo sapiens, vagina, female, adult, united states of america, phoenix, state of arizona, invasive carcinoma, invasive cervical carcinoma, cervical carcinoma)2019-07-25v4No1 / 20
191amnonhigher in preterm birth vaginal samples ( high in premature birth compared to control in homo sapiens vagina female united states of america pregnancy )2017-09-05v4No1 / 22
191amnoncommon homo sapiens, vagina, female, united states of america, pregnancy2017-09-05v4No1 / 31
528amnon high in african american african compared to caucasian in united states of america pregnancy vagina female homo sapiens 2019-07-14v1No1 / 34
191amnonlower in preterm birth vaginal samples ( high in control compared to premature birth in homo sapiens vagina female united states of america pregnancy )2017-09-05v4No1 / 37
528amnon high in caucasian compared to african african american in homo sapiens female vagina pregnancy united states of america 2019-07-14v1No1 / 38
213amnonhigher in patients with bacterial vaginosis compared to healthy controls ( high in bacterial vaginosis compared to control in homo sapiens vagina south africa )2017-10-31v4No1 / 38
389amnoncommon pig, sus scrofa, vagina, united states of america, state of michigan, farm2018-11-04v4No1 / 43
606amnoncommon penis, skin, adult, south africa, homo sapiens, male organism, male2020-04-15v3No1 / 44
213amnoncommon homo sapiens, south africa, vagina2017-10-22v4No1 / 103
213amnonlower in patients with bacterial vaginosis compared to healthy controls ( high in control compared to bacterial vaginosis in homo sapiens vagina south africa )2017-10-31v4No1 / 107

Problems / suggestions? Please email info AT dbbact DOT org