Summary for ontology term: minas gerais state

Number of annotations with term: 32

Top positive-associated sequence

Taxonomy Sequence Recall

Top negative-associated sequence

Taxonomy Sequence Recall

Top COMMON/DOMINANT/HIGH sequence

Taxonomy Sequence F-Score
d__Bacteria;p__"Verrucomicrobia";c__Spartobacteria;g__Spartobacteria_genera_incertae_sedisTACAGAGGTCTCAAGCGTTGTTCGGATTCATTGGGCGTAAAGGGCGCGTAGGCGGTGGGGTAAGTCTGGTGTGAAATCTCGGAGCTCAACTTCGAAATTGCACTGGATACTGCTCTGCTAGAGGGCTGGAGAGGAGATCGGAATTCACGG0.459016
d__BacteriaTACGAAGGGGGCGAGCGTTGTTCGGAGTTACTGGGCGTAAAGGGCGCGTAGGCGGCCCTGTTTGTCGCGTGTGAAAGCCCCGGGCTCAACCTGGGAGGTGCGCGCGAGACGGCGGGGCTGGAGTTCGGGAGAGGAGCGTGGAATTCCCAG0.418605
d__Bacteria;p__"Proteobacteria";c__Alphaproteobacteria;o__Rhodospirillales;f__AcetobacteraceaeTACGAAGGGGGCTAGCGTTGCTCGGAATGACTGGGCGTAAAGGGCGCGTAGGCGGCTTGTACAGTCGGGTGTGAAATTCCTGGGCTTAACCTGGGGGCTGCATTCGATACGTATGGGCTGGAGTGGGGAAGAGGGTCGTGGAATTCCCAG0.409091
d__BacteriaTACGGAGGATGCAAGCGTTGTCCGGAATCATTGGGCGTAAAGGGTCCTGAGGTGGTTTGCTCAGTCCACTGTGAAAGTTCAGGGCTTACCCTTGAAAATGCGGTGGAAACTAGTAGGCTAGAGTACGGTGGGGGCAGAGGGAATTCCCGA0.388060
d__BacteriaTACGTAGAAGACAAGTGTTATTCATCTTTAAAAGGTTTAAAGGGTACCTAGACTGGATATCAAGCCTTAAAAGGGGACTAATATTCTAGAGTTTTATATGTGAAAATTGAACCACATGTGTAGTGTCAATATACTTTAATACGTGGGGGA0.380952
d__BacteriaTACGTAGGCAGCAAGCGTTGTTCGGAATTACTGGGCGTAAAGAGTGTGTAGGCGGCGGTTTAAGTCCCGTGTGAAATCTCCCTGGCTCAACCGGGAGGGTGCGCGGGAAACTGGAGCGCTCGAGCGTGGGCGAGGAAAGCGGAATTCCTG0.380952
d__Bacteria;p__"Acidobacteria";c__Acidobacteria_Gp3TACGTAGGCAGCAAGCGTTGTTCGGAGTTACTGGGCGTAAAGGGTGCGTAGGCGGCTTCTTAAGTCTGGTGTGAAATCTCCCGGCTCAACCGGGAGGGTGCGCCGGATACTGAGAAGCTAGAGTGCGGGAGAGGAAAGTGGAATTCCTGG0.380952
d__Bacteria;p__"Proteobacteria";c__Betaproteobacteria;o__Burkholderiales;f__Burkholderiaceae;g__BurkholderiaTACGTAGGGTGCGAGCGTTAATCGGAATTACTGGGCGTAAAGCGTGCGCAGGCGGTGCGCTAAGACCGATGTGAAATCCCCGGGCTTAACCTGGGAACTGCATTGGTGACTGGCGCGCTGGAGTATGGCAGAGGGGGGTAGAATTCCACG0.380952
d__Bacteria;p__"Verrucomicrobia";c__Spartobacteria;g__Spartobacteria_genera_incertae_sedisTACAGAGGTCTCAAGCGTTGTTCGGATTCATTGGGCGTAAAGGGCGCGTAGGCGGCGGGGTAAGTCTGGTGTGAAATCTCGGAGCTCAACTCCGAAATTGCACTGGATACTGCTCTGCTTGAGGGTTGGAGAGGAGATCGGAATTCACGG0.367347
d__Bacteria;p__"Acidobacteria";c__Acidobacteria_Gp3;g__Gp3TACGTAGGCAGCGAGCGTTGTTCGGAATTACTGGGCGTAAAGAGTGTGTAGGCGGTGCTCTAAGTTCGGTGTGAAATCTCCTGGCTTAACTGGGAGGGTGCGCCGGAAACTGGAGTGCTCGAGCGTGGGAGAGGAAAGCGGAATTCCTGG0.356436

Annotations:

common ontology terms
term enrichment score
TermScore
minas gerais state1.000000
campos rupestres0.619048
vellozia epidendroides0.428571
barbacenia macrantha0.384615
canastra cheese0.222222
brazil0.190476
leaf endosphere0.166667
stem0.133333
time 22 days0.117647
raw milk0.117647
ph 3.50.111111
cheese food product0.111111
cheese curd0.111111
stem endosphere0.105263
milk0.105263
root endosphere0.100000
leaf surface0.095238
root0.093458
rock0.083333
leaf0.080000
LOWER IN root0.042553
rhizosphere0.037453
plant0.036585
LOWER IN rhizosphere0.025316
soil0.017094
Fraction of dbbact annotations with this term covered by the query
TermScore
minas gerais state1.000000
time 22 days1.000000
canastra cheese1.000000
raw milk1.000000
campos rupestres0.500000
ph 3.50.500000
vellozia epidendroides0.500000
barbacenia macrantha0.500000
cheese food product0.500000
cheese curd0.500000
stem endosphere0.333333
milk0.333333
leaf endosphere0.250000
root endosphere0.250000
leaf surface0.200000
stem0.142857
rock0.125000
brazil0.105263
root0.066667
LOWER IN root0.066667
leaf0.047619
plant0.022727
rhizosphere0.021277
LOWER IN rhizosphere0.021277
soil0.009901
Fraction of annotations for the query sequences containing the term
TermScore
minas gerais state1.000000
brazil1.000000
campos rupestres0.812500
vellozia epidendroides0.375000
barbacenia macrantha0.312500
leaf0.250000
rhizosphere0.156250
root0.156250
leaf endosphere0.125000
stem0.125000
canastra cheese0.125000
plant0.093750
soil0.062500
ph 3.50.062500
rock0.062500
root endosphere0.062500
leaf surface0.062500
stem endosphere0.062500
time 22 days0.062500
cheese food product0.062500
raw milk0.062500
milk0.062500
cheese curd0.062500
LOWER IN rhizosphere0.031250
LOWER IN root0.031250
Exp. ID User ID Description Date Region Flag Sequences
548amnondominant minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 5
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 5
548amnonhigh freq in phosphorus impoverished soil (dominant soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 6
548amnondominant minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 6
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 6
977amnondominant minas gerais state, brazil, cheese curd, canastra cheese2022-12-24v4No1 / 10
977amnondominant cheese food product, canastra cheese, minas gerais state, brazil, time 22 days2022-12-24v4No1 / 10
548amnonhigh freq. in endopytic roots of Vellozia epidendroides (dominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 11
977amnondominant in raw milk used for cheese production (dominant minas gerais state, brazil, milk, raw milk)2022-12-24v4No1 / 11
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf endosphere2019-08-17v4No1 / 12
548amnondominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, stem, stem endosphere2019-08-17v4No1 / 15
548amnonhigh freq. in leaf surface of barbacenia macrantha (dominant minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf surface)2019-08-17v4No1 / 16
548amnondominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf, leaf endosphere2019-08-17v4No1 / 17
548amnonhigh freq. on leaf surface (dominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf)2019-08-17v4No1 / 18
548amnondominant minas gerais state, campos rupestres, brazil, vellozia epidendroides, stem2019-08-17v4No1 / 21
977amnoncommon time 22 days, brazil, minas gerais state, canastra cheese, cheese food product2022-12-24v4No1 / 34
977amnoncommon canastra cheese, cheese curd, brazil, minas gerais state2022-12-24v4No1 / 61
977amnoncommon in raw milk used for cheese production (common raw milk, milk, brazil, minas gerais state)2022-12-24v4No1 / 82
548amnon high in plant root compared to rhizosphere in minas gerais state campos rupestres brazil vellozia epidendroides 2019-08-15v4No1 / 100
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, stem, stem endosphere2019-08-17v4No1 / 123
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf endosphere2019-08-17v4No1 / 164
548amnon high in rhizosphere compared to root in minas gerais state campos rupestres brazil vellozia epidendroides 2019-08-15v4No1 / 197
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf, leaf endosphere2019-08-17v4No1 / 243
548amnoncommon minas gerais state, campos rupestres, brazil, vellozia epidendroides, stem2019-08-17v4No1 / 431
548amnoncommon on leaf surface (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, leaf)2019-08-17v4No1 / 548
548amnoncommon in leaf surface of barbacenia macrantha (common minas gerais state, campos rupestres, brazil, barbacenia macrantha, leaf, leaf surface)2019-08-17v4No1 / 550
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, root endosphere, root2019-08-17v4No1 / 575
548amnoncommon minas gerais state, campos rupestres, brazil, barbacenia macrantha, rhizosphere2019-08-17v4No1 / 651
548amnoncommon in endopytic roots of Vellozia epidendroides (common minas gerais state, campos rupestres, brazil, vellozia epidendroides, plant, root)2019-08-15v4No1 / 800
548amnoncommon minas gerais state, campos rupestres, brazil, rock2019-08-17v4No1 / 924
548amnoncommon minas gerais state, campos rupestres, brazil, rhizosphere, vellozia epidendroides2019-08-15v4No1 / 1040
548amnoncommon in phosphorus impoverished soil (common soil, minas gerais state, campos rupestres, brazil, ph 3.5)2019-08-15v4No1 / 1483

Problems / suggestions? Please email info AT dbbact DOT org