Summary for ontology term: mouse chow

Number of annotations with term: 39

Annotations:

common ontology terms
term enrichment score
TermScore
mouse chow0.798732
c57bl/6j0.450704
LOWER IN mouse chow0.431373
mouse0.364906
mus musculus0.326946
high fat diet0.280000
c57bl/60.274143
diet0.265060
LOWER IN high fat diet0.244898
male0.227273
research facility0.220183
jackson laboratory0.170213
ldlr -/-0.170213
janvier labs0.170213
charles river laboratories0.156863
switzerland0.145455
f1515 diet0.133333
strain 129s0.133333
low fat diet0.133333
age 6 weeks0.125000
sweden0.112676
balb/c0.112676
germany0.096386
feces0.093977
female0.093567
ldlr-0.093023
LOWER IN normal diet0.093023
state of washington0.088889
jackson laboratories0.081633
united states of america0.070561
colon0.069565
f3666 diet0.048780
LOWER IN f1515 diet0.048780
LOWER IN f3666 diet0.048780
inulin0.048780
nih 31m chow0.048780
LOWER IN nih-31m chow0.048780
LOWER IN strain 129s0.048780
LOWER IN age 28 days0.048780
LOWER IN low fat diet0.048780
LOWER IN high sugar diet0.048780
LOWER IN age 18 weeks0.048780
high sugar diet0.048780
age 18 weeks0.048780
LOWER IN age 6 weeks0.048780
ketogenic diet0.047619
LOWER IN ketogenic diet0.047619
humanized mouse0.047619
LOWER IN c57bl/6j0.047619
caloric restriction diet0.047619
LOWER IN caloric restriction diet0.047619
LOWER IN diet0.047619
LOWER IN western diet0.047619
western diet0.047619
age 21 days0.047619
south korea0.046512
normal diet0.045455
breast milk0.045455
age0.034483
Fraction of dbbact annotations with this term covered by the query
TermScore
male1.000000
LOWER IN mouse chow0.916667
mouse chow0.900000
high fat diet0.636364
LOWER IN high fat diet0.600000
jackson laboratory0.500000
c57bl/6j0.500000
ldlr -/-0.500000
f3666 diet0.500000
LOWER IN f1515 diet0.500000
f1515 diet0.500000
LOWER IN f3666 diet0.500000
inulin0.500000
ldlr-0.500000
nih 31m chow0.500000
LOWER IN nih-31m chow0.500000
strain 129s0.500000
LOWER IN strain 129s0.500000
LOWER IN normal diet0.500000
LOWER IN age 28 days0.500000
LOWER IN low fat diet0.500000
low fat diet0.500000
janvier labs0.500000
LOWER IN high sugar diet0.500000
LOWER IN age 18 weeks0.500000
high sugar diet0.500000
age 18 weeks0.500000
LOWER IN age 6 weeks0.500000
ketogenic diet0.333333
LOWER IN ketogenic diet0.333333
humanized mouse0.333333
state of washington0.333333
LOWER IN c57bl/6j0.333333
caloric restriction diet0.333333
LOWER IN caloric restriction diet0.333333
charles river laboratories0.333333
LOWER IN diet0.333333
LOWER IN western diet0.333333
western diet0.333333
age 21 days0.333333
age 6 weeks0.333333
c57bl/60.266667
diet0.250000
switzerland0.250000
south korea0.250000
mouse0.224490
jackson laboratories0.200000
normal diet0.200000
breast milk0.200000
mus musculus0.196429
sweden0.125000
balb/c0.125000
research facility0.123711
germany0.090909
female0.060606
colon0.052632
age0.052632
feces0.049751
united states of america0.037634
Fraction of annotations for the query sequences containing the term
TermScore
research facility1.000000
mouse0.974359
mus musculus0.974359
feces0.846154
mouse chow0.717949
united states of america0.564103
c57bl/6j0.410256
c57bl/60.282051
LOWER IN mouse chow0.282051
diet0.282051
female0.205128
high fat diet0.179487
LOWER IN high fat diet0.153846
male0.128205
jackson laboratory0.102564
ldlr -/-0.102564
switzerland0.102564
charles river laboratories0.102564
sweden0.102564
colon0.102564
balb/c0.102564
germany0.102564
janvier labs0.102564
f1515 diet0.076923
strain 129s0.076923
low fat diet0.076923
age 6 weeks0.076923
ldlr-0.051282
state of washington0.051282
jackson laboratories0.051282
LOWER IN normal diet0.051282
ketogenic diet0.025641
f3666 diet0.025641
LOWER IN f1515 diet0.025641
LOWER IN ketogenic diet0.025641
LOWER IN f3666 diet0.025641
humanized mouse0.025641
inulin0.025641
nih 31m chow0.025641
LOWER IN nih-31m chow0.025641
LOWER IN c57bl/6j0.025641
LOWER IN strain 129s0.025641
caloric restriction diet0.025641
normal diet0.025641
LOWER IN caloric restriction diet0.025641
LOWER IN diet0.025641
LOWER IN western diet0.025641
western diet0.025641
age0.025641
age 21 days0.025641
LOWER IN age 28 days0.025641
breast milk0.025641
south korea0.025641
LOWER IN low fat diet0.025641
LOWER IN high sugar diet0.025641
LOWER IN age 18 weeks0.025641
high sugar diet0.025641
age 18 weeks0.025641
LOWER IN age 6 weeks0.025641
Exp. ID User ID Description Date Region Flag Sequences
325amnonhigher in mice supplemented with inulin in diet compared to normal diet ( high in diet inulin compared to mouse chow in humanized mouse feces united states of america research facility )2018-04-29v4No1 / 1
413amnonhighfreq mouse, mus musculus, research facility, feces, jackson laboratory, c57bl/6j, ldlr -/-, mouse chow2018-11-26v4No1 / 11
214amnonhighfreq mouse, mus musculus, feces, united states of america, research facility, strain 129s, mouse chow2017-10-23v4No1 / 13
214amnonhighfreq mouse, mus musculus, feces, united states of america, research facility, c57bl/6j, mouse chow2017-10-23v4No1 / 14
494amnonhighfreq mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, mouse chow2019-02-27v4No1 / 15
369amnonhighfreq mus musculus, mouse, research facility, switzerland, c57bl/6j, feces, mouse chow2018-09-06v4No1 / 17
220amnonhighfreq mus musculus, mouse, feces, research facility, united states of america, female, balb/c, diet, mouse chow, low fat diet2017-10-24v4No1 / 18
522amnonhighfreq mouse, mus musculus, feces, germany, research facility, female, c57bl/6j, janvier labs, age 6 weeks, mouse chow2019-07-03v3No1 / 19
383amnonhighfreq mus musculus, mouse, feces, research facility, c57bl/6, united states of america, mouse chow, f1515 diet2018-10-22v4No1 / 23
383amnonhigher in feces of ketogenic diet fed mice compared to normal mouse chow ( high in ketogenic diet f3666 diet compared to mouse chow f1515 diet in mus musculus mouse feces research facility c57bl/6 united states of america )2018-10-22v4No1 / 31
219amnonhigher in pre-weaning compared to post-weaning in mouse feces ( high in age age 21 days breast milk compared to age 28 days mouse chow in mus musculus mouse feces c57bl/6 male research facility south korea )2017-10-24v4No1 / 36
383amnonlower in feces of ketogenic diet fed mice compared to normal mouse chow ( high in mouse chow f1515 diet compared to ketogenic diet f3666 diet in mus musculus mouse feces research facility c57bl/6 united states of america )2018-10-22v4No1 / 42
413amnon high in high fat diet compared to mouse chow in mouse mus musculus research facility feces jackson laboratory c57bl/6j ldlr -/- 2018-11-26v4No1 / 51
369amnonhigher in mice with 40% caloric restriction diet ( high in caloric restriction diet compared to normal diet in mus musculus mouse research facility switzerland c57bl/6j feces mouse chow )2018-09-06v4No1 / 58
214amnoncommon mouse, mus musculus, feces, united states of america, research facility, c57bl/6j, mouse chow2017-10-23v4No1 / 60
326amnon high in diet high fat diet compared to mouse chow in mus musculus mouse c57bl/6 ldlr- research facility united states of america state of washington 2018-04-29v4No1 / 65
522amnon high in high sugar diet age 18 weeks compared to age 6 weeks mouse chow in mouse mus musculus feces germany research facility female c57bl/6j janvier labs 2019-07-03v3No1 / 81
494amnon high in diet western diet high fat diet compared to mouse chow in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden colon 2019-02-27v4No1 / 85
214amnoncommon mouse, mus musculus, feces, united states of america, research facility, strain 129s, mouse chow2017-10-23v4No1 / 95
220amnon high in diet low fat diet mouse chow compared to high fat diet in mus musculus mouse feces research facility united states of america female balb/c 2017-10-24v4No1 / 113
383amnoncommon mus musculus, mouse, feces, research facility, c57bl/6, united states of america, mouse chow, f1515 diet2018-10-22v4No1 / 120
522amnoncommon mouse, mus musculus, feces, germany, research facility, female, c57bl/6j, janvier labs, age 6 weeks, mouse chow2019-07-03v3No1 / 130
214amnon high in c57bl/6j compared to strain 129s in feces united states of america research facility mus musculus mouse jackson laboratories mouse chow 2017-10-23v4No1 / 154
220amnon high in diet high fat diet compared to mouse chow low fat diet in mus musculus mouse feces research facility united states of america female balb/c 2017-10-24v4No1 / 154
413amnon high in mouse chow compared to high fat diet in mouse mus musculus research facility feces jackson laboratory c57bl/6j ldlr -/- 2018-11-26v4No1 / 163
123amnon high in high fat diet diet compared to normal diet mouse chow in mus musculus mouse feces research facility united states of america c57bl/6j 2017-04-13v4No1 / 170
369amnonlower in mice with 40% caloric restriction diet ( high in normal diet compared to caloric restriction diet in mus musculus mouse research facility switzerland c57bl/6j feces mouse chow )2018-09-06v4No1 / 180
326amnon high in diet mouse chow compared to high fat diet in mus musculus mouse c57bl/6 ldlr- research facility united states of america state of washington 2018-04-29v4No1 / 189
413amnoncommon mouse, mus musculus, research facility, feces, jackson laboratory, c57bl/6j, ldlr -/-, mouse chow2018-11-26v4No1 / 190
372amnon high in high fat diet compared to mouse chow in mouse mus musculus feces research facility united states of america 2018-09-07v4No1 / 199
214amnon high in strain 129s compared to c57bl/6j in feces united states of america research facility mus musculus mouse jackson laboratories mouse chow 2017-10-23v4No1 / 207
369amnoncommon mus musculus, mouse, research facility, switzerland, c57bl/6j, feces, mouse chow2018-09-06v4No1 / 224
214amnon high in diet high fat diet compared to nih-31m chow mouse chow in mouse mus musculus feces united states of america research facility 2017-10-23v4No1 / 255
220amnoncommon mus musculus, mouse, feces, research facility, united states of america, female, balb/c, diet, mouse chow, low fat diet2017-10-24v4No1 / 262
494amnoncommon mus musculus, mouse, research facility, c57bl/6, male, charles river laboratories, sweden, colon, mouse chow2019-02-27v4No1 / 275
494amnon high in mouse chow compared to diet western diet high fat diet in mus musculus mouse research facility c57bl/6 male charles river laboratories sweden colon 2019-02-27v4No1 / 293
522amnon high in mouse chow age 6 weeks compared to high sugar diet age 18 weeks in mouse mus musculus feces germany research facility female c57bl/6j janvier labs 2019-07-03v3No1 / 325
214amnon high in diet nih 31m chow mouse chow compared to high fat diet in mouse mus musculus feces united states of america research facility 2017-10-23v4No1 / 495
372amnon high in mouse chow compared to high fat diet in mouse mus musculus feces research facility united states of america 2018-09-07v4No1 / 579

Problems / suggestions? Please email info AT dbbact DOT org